Your message dated Fri, 19 Sep 2025 21:20:31 +0000
with message-id <[email protected]>
and subject line Bug#1097151: fixed in lastz 1.04.52-1
has caused the Debian Bug report #1097151,
regarding lastz: ftbfs with GCC-15
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1097151: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1097151
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:lastz
Version: 1.04.22-2
Severity: important
Tags: sid forky
User: [email protected]
Usertags: ftbfs-gcc-15
[This bug is NOT targeted to the upcoming trixie release]
Please keep this issue open in the bug tracker for the package it
was filed for. If a fix in another package is required, please
file a bug for the other package (or clone), and add a block in this
package. Please keep the issue open until the package can be built in
a follow-up test rebuild.
The package fails to build in a test rebuild on at least amd64 with
gcc-15/g++-15, but succeeds to build with gcc-14/g++-14. The
severity of this report will be raised before the forky release.
The full build log can be found at:
http://qa-logs.debian.net/2025/02/16/amd64exp/lastz_1.04.22-2_unstable_gccexp.log.gz
The last lines of the build log are at the end of this report.
To build with GCC 15, either set CC=gcc-15 CXX=g++-15 explicitly,
or install the gcc, g++, gfortran, ... packages from experimental.
apt-get -t=experimental install g++
GCC 15 now defaults to the C23/C++23 standards, exposing many FTBFS.
Other Common build failures are new warnings resulting in build failures
with -Werror turned on, or new/dropped symbols in Debian symbols files.
For other C/C++ related build failures see the porting guide at
http://gcc.gnu.org/gcc-15/porting_to.html
[...]
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\'
align_diffs.c -o align_diffs.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\'
utilities.c -o utilities.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\'
dna_utilities.c -o dna_utilities.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\'
sequences.c -o sequences.o
sequences.c:646:9: error: initializer-string for array of ‘unsigned char’ is
too long [-Werror=unterminated-string-initialization]
646 | "TTTTTTTTTTTTTTTT"
| ^~~~~~~~~~~~~~~~~~
sequences.c:664:9: error: initializer-string for array of ‘unsigned char’ is
too long [-Werror=unterminated-string-initialization]
664 | "TCAGNXXXtcagnxxx"
| ^~~~~~~~~~~~~~~~~~
sequences.c:682:9: error: initializer-string for array of ‘unsigned char’ is
too long [-Werror=unterminated-string-initialization]
682 | "TTTTTTTTTTTTTTTT"
| ^~~~~~~~~~~~~~~~~~
sequences.c:700:9: error: initializer-string for array of ‘unsigned char’ is
too long [-Werror=unterminated-string-initialization]
700 | "TCAGNXXXTCAGNXXX"
| ^~~~~~~~~~~~~~~~~~
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\'
capsule.c -o capsule.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
lastz.c -o lastz_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
infer_scores.c -o infer_scores_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
seeds.c -o seeds_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
pos_table.c -o pos_table_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
quantum.c -o quantum_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
seed_search.c -o seed_search_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
diag_hash.c -o diag_hash_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
chain.c -o chain_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
gapped_extend.c -o gapped_extend_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
tweener.c -o tweener_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
masking.c -o masking_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
segment.c -o segment_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
edit_script.c -o edit_script_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
identity_dist.c -o identity_dist_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
coverage_dist.c -o coverage_dist_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
continuity_dist.c -o continuity_dist_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
output.c -o output_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' gfa.c
-o gfa_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' lav.c
-o lav_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' axt.c
-o axt_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' maf.c
-o maf_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
cigar.c -o cigar_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' sam.c
-o sam_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
genpaf.c -o genpaf_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
text_align.c -o text_align_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
align_diffs.c -o align_diffs_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
utilities.c -o utilities_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
dna_utilities.c -o dna_utilities_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
sequences.c -o sequences_D.o
sequences.c:646:9: error: initializer-string for array of ‘unsigned char’ is
too long [-Werror=unterminated-string-initialization]
646 | "TTTTTTTTTTTTTTTT"
| ^~~~~~~~~~~~~~~~~~
sequences.c:664:9: error: initializer-string for array of ‘unsigned char’ is
too long [-Werror=unterminated-string-initialization]
664 | "TCAGNXXXtcagnxxx"
| ^~~~~~~~~~~~~~~~~~
sequences.c:682:9: error: initializer-string for array of ‘unsigned char’ is
too long [-Werror=unterminated-string-initialization]
682 | "TTTTTTTTTTTTTTTT"
| ^~~~~~~~~~~~~~~~~~
sequences.c:700:9: error: initializer-string for array of ‘unsigned char’ is
too long [-Werror=unterminated-string-initialization]
700 | "TCAGNXXXTCAGNXXX"
| ^~~~~~~~~~~~~~~~~~
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2
-Werror=implicit-function-declaration
-ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall
-Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\"
-DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\'
capsule.c -o capsule_D.o
cc1: all warnings being treated as errors
make[2]: *** [Makefile:94: sequences.o] Error 1
make[2]: *** Waiting for unfinished jobs....
cc1: all warnings being treated as errors
make[2]: *** [Makefile:97: sequences_D.o] Error 1
make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src'
make[1]: *** [Makefile:14: build_lastz] Error 2
make[1]: Leaving directory '/build/reproducible-path/lastz-1.04.22'
dh_auto_build: error: make -j8 "INSTALL=install --strip-program=true" returned
exit code 2
make: *** [debian/rules:13: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--- End Message ---
--- Begin Message ---
Source: lastz
Source-Version: 1.04.52-1
Done: Étienne Mollier <[email protected]>
We believe that the bug you reported is fixed in the latest version of
lastz, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Étienne Mollier <[email protected]> (supplier of updated lastz package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Fri, 19 Sep 2025 22:45:39 +0200
Source: lastz
Architecture: source
Version: 1.04.52-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Étienne Mollier <[email protected]>
Closes: 1097151
Changes:
lastz (1.04.52-1) unstable; urgency=medium
.
* Team upload.
* New upstream version 1.04.52
* d/patches/*: refresh following new upstream release.
* nullchar.patch: new: fix build failure with gcc-15. (Closes: #1097151)
* d/control: declare compliance to standards version 4.7.2.
* d/patches/*: normalize Last-Update timestamp.
* d/watch: move to v5 watch Github template.
* d/control: drop Rules-Requires-Root: this is now default.
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Files:
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9af787756db3c6517d3b015a7d59ecb7 8484391 science optional
lastz_1.04.52.orig.tar.gz
279f0fc10febeb31a72e5979e51a2c98 9908 science optional
lastz_1.04.52-1.debian.tar.xz
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