Your message dated Sun, 14 Sep 2025 01:35:06 +0000
with message-id <[email protected]>
and subject line Bug#1114259: fixed in petsc4py 3.22.4-2
has caused the Debian Bug report #1114259,
regarding sphinx autodoc got an unexpected keyword argument 'short_literals'
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
1114259: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1114259
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:petsc4py
Version: 3.22.4-1
Severity: serious
Tags: ftbfs forky sid
Dear maintainer:
During a rebuild of all packages in unstable, your package failed to build.
Below you will find how the build ends (probably the most relevant part,
but not necessarily). If required, the full build log is available here:
https://people.debian.org/~sanvila/build-logs/202509/
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:petsc4py, so that this is still
visible in the BTS web page for this package.
Thanks.
--------------------------------------------------------------------------------
[...]
debian/rules clean
dh clean --with python3,sphinxdoc --buildsystem=pybuild
dh_auto_clean -O--buildsystem=pybuild
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
debian/rules execute_after_dh_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
rm -rf .eggs
rm -f src/petsc4py/PETSc.c src/petsc4py/PETSc.h src/petsc4py/PETSc_api.h
rm -rf docs/source/reference docs/source/demo
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules binary
dh binary --with python3,sphinxdoc --buildsystem=pybuild
dh_update_autotools_config -O--buildsystem=pybuild
[... snipped ...]
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/hashijkkey.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/dmplextransformimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/kspimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/drawimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/hashsetij.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/isimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/tsimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/sfimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/dmdaimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/dmswarmimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/petscdsimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/pcpatchimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/veccupmimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/logimpldeprecated.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/pcimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/hashmapiv.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/characteristicimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/dmmbimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/petschypre.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/dmimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/viewerexodusiiimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/glvisvecimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/hashseti.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/snesimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/matdensecupmimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/bagimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/hashmap.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/dmpatchimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/hashmapij.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/hashmapijk.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/pcisimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/hashijklkey.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/loghandlerimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/hashijkey.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/pcgamgimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/dmstagimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/matisimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/viewercgnsimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/fortranimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/petschpddm.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/hashmapijv.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/randomimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/matimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/f90impl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/hashmap.txt.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/bmimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/hashmapi.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/viewerimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/viewerhdf5impl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/vecimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/deviceimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/sectionimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/dmlabelimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/pcbjkokkosimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/vieweradiosimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/logimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/glvisviewerimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/petsclegacycupmblas.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/hashmapobj.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/taoimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/petscadvancedmacros.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/petscconvestimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/mempoison.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/petscfptimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/hashset.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/dmnetworkimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/partitionerimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/garbagecollector.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/dtimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/taolinesearchimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/dmpleximpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/dmproductimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/pcbddcprivateimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/petscfeimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/tshistoryimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/hashmapijkl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/dmforestimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/matorderimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/pcmgimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/hashset.txt.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/petscelemental.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/pcbddcimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/dmadaptorimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petsc/private/petscimpl.h
won't be automatically included in the manifest: the path must be relative
dependency
/usr/lib/petscdir/petsc64-3.22/x86_64-linux-gnu-complex/include/petscconf.h
won't be automatically included in the manifest: the path must be relative
reading manifest file 'src/petsc4py.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE.rst'
writing manifest file 'src/petsc4py.egg-info/SOURCES.txt'
Copying src/petsc4py.egg-info to
build/bdist.linux-x86_64/wheel/./petsc4py-3.22.4.egg-info
running install_scripts
creating build/bdist.linux-x86_64/wheel/petsc4py-3.22.4.dist-info/WHEEL
creating
'/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_petsc4py_64_complex3.22/.tmp-dydx2zdh/petsc4py-3.22.4-cp313-cp313-linux_x86_64.whl'
and adding 'build/bdist.linux-x86_64/wheel' to it
adding 'petsc4py/PETSc.h'
adding 'petsc4py/PETSc.pxd'
adding 'petsc4py/PETSc.py'
adding 'petsc4py/PETSc_api.h'
adding 'petsc4py/__init__.py'
adding 'petsc4py/__init__.pyi'
adding 'petsc4py/__main__.py'
adding 'petsc4py/__main__.pyi'
adding 'petsc4py/py.typed'
adding 'petsc4py/typing.py'
adding 'petsc4py/include/petsc4py/numpy.h'
adding 'petsc4py/include/petsc4py/petsc4py.h'
adding 'petsc4py/include/petsc4py/petsc4py.i'
adding 'petsc4py/include/petsc4py/pybuffer.h'
adding 'petsc4py/include/petsc4py/pyscalar.h'
adding 'petsc4py/lib/PETSc.cpython-313-x86_64-linux-gnu.so'
adding 'petsc4py/lib/__init__.py'
adding 'petsc4py/lib/__init__.pyi'
adding 'petsc4py/lib/petsc.cfg'
adding 'petsc4py-3.22.4.dist-info/licenses/LICENSE.rst'
adding 'petsc4py-3.22.4.dist-info/METADATA'
adding 'petsc4py-3.22.4.dist-info/WHEEL'
adding 'petsc4py-3.22.4.dist-info/top_level.txt'
adding 'petsc4py-3.22.4.dist-info/RECORD'
removing build/bdist.linux-x86_64/wheel
Successfully built petsc4py-3.22.4-cp313-cp313-linux_x86_64.whl
I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.13 with
"installer" module
# petsc4py embeds the deep PETSC_DIR path as RPATH in its library.
# Swap it out for a standard path, or else dh_shlibdeps gets confused
chrpath -d .pybuild/*python*/build/petsc4py/lib/PETSc*.so
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_auto_build-indep
make[1]: Entering directory '/<<PKGBUILDDIR>>'
if ! [ -d
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_petsc4py_real3.22/build/petsc4py ];
then \
PYBUILD_NAME=petsc4py_real3.22
PETSC_DIR=/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real pybuild -p3.13
--build; \
fi
PYTHONPATH=/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_petsc4py_real3.22/build
LOC=/usr/share/doc/petsc3.22-doc/docs http_proxy='127.0.0.1:9' sphinx-build -N
-bhtml docs/source build/html # HTML generator
Running Sphinx v8.2.3
Using PETSC inventory from file:///usr/share/doc/petsc3.22-doc/docs/objects.inv
<Inventory (url): PETSc v3.22, 8011 objects>
loading translations [en]... done
[autosummary] generating autosummary for: citing.rst, contributing.rst,
demo/demo.rst, demo/poisson2d/poisson2d.rst, documentation_standards.rst,
index.rst, install.rst, overview.rst, petsc_options.rst,
petsc_python_types.rst, reference.rst
[autosummary] generating autosummary for:
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.PETSc.rst,
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.rst,
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.typing.rst
[autosummary] generating autosummary for: /<<PKGBUILDDIR>>/d
[too-long-redacted] sc4py.typing.TSRHSJacobianP.rst
[autosummary] generating autosummary for: /<<PKGBUILDDIR>>/d
[too-long-redacted] /petsc4py.PETSc.Viewer.Type.rst
loading intersphinx inventory 'python' from
/usr/share/doc/python3/html/objects.inv ...
loading intersphinx inventory 'numpy' from
/usr/share/doc/python-numpy/html/objects.inv ...
loading intersphinx inventory 'numpydoc' from
https://numpydoc.readthedocs.io/en/latest/objects.inv ...
loading intersphinx inventory 'mpi4py' from
/usr/share/doc/python-mpi4py-doc/html/objects.inv ...
loading intersphinx inventory 'pyopencl' from
/usr/share/doc/python-pyopencl-doc/html/objects.inv ...
loading intersphinx inventory 'dlpack' from
https://dmlc.github.io/dlpack/latest/objects.inv ...
loading intersphinx inventory 'pyopencl' from
https://documen.tician.de/pyopencl/objects.inv ...
loading intersphinx inventory 'petsc' from petsc_objects.inv ...
WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory 'https://dmlc.github.io/dlpack/latest/objects.inv' not
fetchable due to <class 'requests.exceptions.ConnectionError'>:
HTTPSConnectionPool(host='dmlc.github.io', port=443): Max retries exceeded with
url: /dlpack/latest/objects.inv (Caused by
NameResolutionError("<urllib3.connection.HTTPSConnection object at
0x7f25bc3d2e90>: Failed to resolve 'dmlc.github.io' ([Errno -3] Temporary
failure in name resolution)"))
WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory 'https://numpydoc.readthedocs.io/en/latest/objects.inv'
not fetchable due to <class 'requests.exceptions.ConnectionError'>:
HTTPSConnectionPool(host='numpydoc.readthedocs.io', port=443): Max retries
exceeded with url: /en/latest/objects.inv (Caused by
NameResolutionError("<urllib3.connection.HTTPSConnection object at
0x7f25bc4138c0>: Failed to resolve 'numpydoc.readthedocs.io' ([Errno -3]
Temporary failure in name resolution)"))
WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory '/usr/share/doc/python-pyopencl-doc/html/objects.inv' not
readable due to FileNotFoundError: [Errno 2] No such file or directory:
'/usr/share/doc/python-pyopencl-doc/html/objects.inv'
intersphinx inventory 'https://documen.tician.de/pyopencl/objects.inv' not
fetchable due to <class 'requests.exceptions.ConnectionError'>:
HTTPSConnectionPool(host='documen.tician.de', port=443): Max retries exceeded
with url: /pyopencl/objects.inv (Caused by
NameResolutionError("<urllib3.connection.HTTPSConnection object at
0x7f25bc3d2fd0>: Failed to resolve 'documen.tician.de' ([Errno -3] Temporary
failure in name resolution)"))
building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 11 source files that are out of date
updating environment: [new config] 227 added, 0 changed, 0 removed
reading sources... [ 0%] citing
reading sources... [ 1%] contributing
reading sources... [ 1%] demo/demo
reading sources... [ 2%] demo/poisson2d/poisson2d
reading sources... [ 2%] documentation_standards
reading sources... [ 3%] index
reading sources... [ 3%] install
reading sources... [ 4%] overview
reading sources... [ 4%] petsc_options
reading sources... [ 4%] petsc_python_types
reading sources... [ 5%] reference
reading sources... [ 5%] reference/petsc4py
reading sources... [ 6%] reference/petsc4py.PETSc
reading sources... [ 6%] reference/petsc4py.PETSc.AO
reading sources... [ 7%] reference/petsc4py.PETSc.AO.Type
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.Type' with 'Type'. [autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.Type' with 'AO.Type'. [autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.app2petsc' with 'app2petsc'. [autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.app2petsc' with 'AO.app2petsc'. [autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.createBasic' with 'createBasic'. [autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.createBasic' with 'AO.createBasic'.
[autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.createMapping' with 'createMapping'.
[autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.createMapping' with 'AO.createMapping'.
[autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.createMemoryScalable' with 'createMemoryScalable'.
[autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.createMemoryScalable' with 'AO.createMemoryScalable'.
[autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.destroy' with 'destroy'. [autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.destroy' with 'AO.destroy'. [autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.getType' with 'getType'. [autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.getType' with 'AO.getType'. [autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.petsc2app' with 'petsc2app'. [autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.petsc2app' with 'AO.petsc2app'. [autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.view' with 'view'. [autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.view' with 'AO.view'. [autosummary.import_cycle]
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.PETSc.py:docstring of
petsc4py.PETSc.AO.app2petsc:16: ERROR: Unknown interpreted text role "py:any".
[docutils]
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.PETSc.py:docstring of
petsc4py.PETSc.AO.app2petsc:16: ERROR: Unknown interpreted text role "py:any".
[docutils]
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.PETSc.py:docstring of
petsc4py.PETSc.AO.app2petsc:16: ERROR: Unknown interpreted text role "py:any".
[docutils]
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.PETSc.py:docstring of
petsc4py.PETSc.AO.createBasic:15: ERROR: Unknown interpreted text role
"py:any". [docutils]
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.PETSc.py:docstring of
petsc4py.PETSc.AO.createBasic:15: ERROR: Unknown interpreted text role
"py:any". [docutils]
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.PETSc.py:docstring of
petsc4py.PETSc.AO.createBasic:15: ERROR: Unknown interpreted text role
"py:any". [docutils]
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.PETSc.py:docstring of
petsc4py.PETSc.AO.createBasic:15: ERROR: Unknown interpreted text role
"py:any". [docutils]
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.PETSc.py:docstring of
petsc4py.PETSc.AO.createMapping:13: ERROR: Unknown interpreted text role
"py:any". [docutils]
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.PETSc.py:docstring of
petsc4py.PETSc.AO.createMapping:13: ERROR: Unknown interpreted text role
"py:any". [docutils]
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.PETSc.py:docstring of
petsc4py.PETSc.AO.createMapping:13: ERROR: Unknown interpreted text role
"py:any". [docutils]
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.PETSc.py:docstring of
petsc4py.PETSc.AO.createMemoryScalable:18: ERROR: Unknown interpreted text role
"py:any". [docutils]
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.PETSc.py:docstring of
petsc4py.PETSc.AO.createMemoryScalable:18: ERROR: Unknown interpreted text role
"py:any". [docutils]
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.PETSc.py:docstring of
petsc4py.PETSc.AO.createMemoryScalable:18: ERROR: Unknown interpreted text role
"py:any". [docutils]
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.PETSc.py:docstring of
petsc4py.PETSc.AO.createMemoryScalable:18: ERROR: Unknown interpreted text role
"py:any". [docutils]
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.PETSc.py:docstring of
petsc4py.PETSc.AO.destroy:5: ERROR: Unknown interpreted text role "py:any".
[docutils]
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.PETSc.py:docstring of
petsc4py.PETSc.AO.getType:5: ERROR: Unknown interpreted text role "py:any".
[docutils]
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.PETSc.py:docstring of
petsc4py.PETSc.AO.petsc2app:16: ERROR: Unknown interpreted text role "py:any".
[docutils]
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.PETSc.py:docstring of
petsc4py.PETSc.AO.petsc2app:16: ERROR: Unknown interpreted text role "py:any".
[docutils]
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.PETSc.py:docstring of
petsc4py.PETSc.AO.petsc2app:16: ERROR: Unknown interpreted text role "py:any".
[docutils]
/<<PKGBUILDDIR>>/docs/source/reference/petsc4py.PETSc.py:docstring of
petsc4py.PETSc.AO.view:7: ERROR: Unknown interpreted text role "py:any".
[docutils]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.Type.ADVANCED' with 'ADVANCED'. [autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.Type.ADVANCED' with 'Type.ADVANCED'.
[autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.Type.BASIC' with 'BASIC'. [autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.Type.BASIC' with 'Type.BASIC'. [autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.Type.MAPPING' with 'MAPPING'. [autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.Type.MAPPING' with 'Type.MAPPING'. [autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.Type.MEMORYSCALABLE' with 'MEMORYSCALABLE'.
[autosummary.import_cycle]
WARNING: Summarised items should not include the current module. Replace
'petsc4py.PETSc.AO.Type.MEMORYSCALABLE' with 'Type.MEMORYSCALABLE'.
[autosummary.import_cycle]
Versions
========
* Platform: linux;
(Linux-6.12.41+deb13-cloud-amd64-x86_64-with-glibc2.41)
* Python version: 3.13.7 (CPython)
* Sphinx version: 8.2.3
* Docutils version: 0.21.2
* Jinja2 version: 3.1.6
* Pygments version: 2.18.0
Last Messages
=============
reading sources... [ 6%]
reference/petsc4py.PETSc
reading sources... [ 6%]
reference/petsc4py.PETSc.AO
reading sources... [ 7%]
reference/petsc4py.PETSc.AO.Type
Loaded Extensions
=================
* sphinx.ext.mathjax (8.2.3)
* alabaster (0.7.16)
* sphinx.ext.autodoc.preserve_defaults (8.2.3)
* sphinx.ext.autodoc.type_comment (8.2.3)
* sphinx.ext.autodoc.typehints (8.2.3)
* sphinx.ext.autodoc (8.2.3)
* sphinx.ext.autosummary (8.2.3)
* sphinx.ext.intersphinx (8.2.3)
* sphinx.ext.napoleon (8.2.3)
* sphinx.ext.extlinks (8.2.3)
* sphinxcontrib.jquery (4.1)
* sphinx_rtd_theme (unknown version)
Traceback
=========
File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/__init__.py",
line 2980, in add_directive_header
objrepr = stringify_annotation(
annotations.get(self.objpath[-1]),
mode,
short_literals=short_literals,
)
TypeError: _setup_autodoc.<locals>.stringify_annotation() got an unexpected
keyword argument 'short_literals'
The full traceback has been saved in:
/tmp/sphinx-err-kcxrwo7d.log
To report this error to the developers, please open an issue at
<https://github.com/sphinx-doc/sphinx/issues/>. Thanks!
Please also report this if it was a user error, so that a better error message
can be provided next time.
make[1]: *** [debian/rules:75: override_dh_auto_build-indep] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:40: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
--- End Message ---
--- Begin Message ---
Source: petsc4py
Source-Version: 3.22.4-2
Done: Drew Parsons <[email protected]>
We believe that the bug you reported is fixed in the latest version of
petsc4py, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Drew Parsons <[email protected]> (supplier of updated petsc4py package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
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Hash: SHA512
Format: 1.8
Date: Sat, 13 Sep 2025 19:22:26 +0200
Source: petsc4py
Architecture: source
Version: 3.22.4-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<[email protected]>
Changed-By: Drew Parsons <[email protected]>
Closes: 1114259
Changes:
petsc4py (3.22.4-2) unstable; urgency=medium
.
* debian patch fixes_for_sphinx_MR8685.diff applies upstream MR#8685
to fix doc build with sphinx. Closes: #1114259.
* Build-Depends: python3-numpy-dev (for dh_numpy3)
* Standards-Version: 4.7.2
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Files:
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