Your message dated Sat, 13 Sep 2025 22:03:28 +0000
with message-id <[email protected]>
and subject line Bug#1114393: fixed in sourmash 4.9.4-1
has caused the Debian Bug report #1114393,
regarding sourmash: FTBFS: error: failed to select a version for the
requirement `typed-builder = "^0.20"`
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
1114393: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1114393
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:sourmash
Version: 4.8.14-3
Severity: serious
Tags: ftbfs forky sid
Dear maintainer:
During a rebuild of all packages in unstable, your package failed to build.
Below you will find how the build ends (probably the most relevant part,
but not necessarily). If required, the full build log is available here:
https://people.debian.org/~sanvila/build-logs/202509/
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:sourmash, so that this is still
visible in the BTS web page for this package.
Thanks.
--------------------------------------------------------------------------------
[...]
debian/rules clean
dh clean --buildsystem=pybuild
dh_auto_clean -O--buildsystem=pybuild
pybuild --clean -i python{version} -p 3.13
rm -rf .pybuild/
find . -name \*.pyc -exec rm {} \;
debian/rules execute_after_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
rm -rf debian/cargo_registry
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/sourmash.substvars debian/files
rm -fr -- debian/sourmash/ debian/tmp/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path
.\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o
-type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a \( -name autom4te.cache -o -name __pycache__ \)
-prune -exec rm -rf {} + \) \)
debian/rules binary
dh binary --buildsystem=pybuild
dh_update_autotools_config -O--buildsystem=pybuild
dh_autoreconf -O--buildsystem=pybuild
debian/rules execute_before_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
/usr/share/cargo/bin/cargo prepare-debian debian/cargo_registry
--link-from-system
debian cargo wrapper: options = ['parallel=2'], profiles = [], parallel =
['-j2'], lto =
debian cargo wrapper: rust_type = x86_64-unknown-linux-gnu, gnu_type =
x86_64-linux-gnu
debian cargo wrapper: linking /usr/share/cargo/registry/* into
/<<PKGBUILDDIR>>/debian/cargo_registry/
rm -f Cargo.lock
# needed because we patch Cargo.toml
cargo generate-lockfile --manifest-path src/core/Cargo.toml --offline
debian cargo wrapper: options = ['parallel=2'], profiles = [], parallel =
['-j2'], lto =
debian cargo wrapper: rust_type = x86_64-unknown-linux-gnu, gnu_type =
x86_64-linux-gnu
debian cargo wrapper: running subprocess (['env', 'RUST_BACKTRACE=1',
'/usr/bin/cargo', 'generate-lockfile', '--manifest-path',
'src/core/Cargo.toml', '--offline'],) {}
error: failed to select a version for the requirement `typed-builder = "^0.20"`
candidate versions found which didn't match: 0.21.2
location searched: directory source `/<<PKGBUILDDIR>>/debian/cargo_registry`
(which is replacing registry `crates-io`)
required by package `sourmash v0.18.0 (/<<PKGBUILDDIR>>/src/core)`
perhaps a crate was updated and forgotten to be re-vendored?
As a reminder, you're using offline mode (--offline) which can sometimes cause
surprising resolution failures, if this error is too confusing you may wish to
retry without the offline flag.
make[1]: *** [debian/rules:35: execute_before_dh_auto_configure] Error 101
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:23: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
--- End Message ---
--- Begin Message ---
Source: sourmash
Source-Version: 4.9.4-1
Done: Michael R. Crusoe <[email protected]>
We believe that the bug you reported is fixed in the latest version of
sourmash, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Michael R. Crusoe <[email protected]> (supplier of updated sourmash package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Sat, 13 Sep 2025 12:06:13 +0200
Source: sourmash
Architecture: source
Version: 4.9.4-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Michael R. Crusoe <[email protected]>
Closes: 1114393
Changes:
sourmash (4.9.4-1) unstable; urgency=medium
.
* New upstream version. Closes: #1114393
* Standards-Version: 4.7.2 (routine-update)
* Refreshed patches. Dropped "skip_from-finch_feature", upstream
removed the conversion from Finch in version 4.9.0.
* Added a new patch to adapt to the older version of the md5 Rust crate in
Debian.
* docs: new build-dep of python3-sphinx-copybutton.
* d/rules: parallelize the pytest respecting DEB_BUILD_OPTION_PARALLEL
* Install the README
* d/rules: set MPLCONFIGDIR
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Files:
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sourmash_4.9.4-1.git.tar.xz
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sourmash_4.9.4-1_source.buildinfo
Git-Tag-Info: tag=1bb37fb6b54152a9138436b143532e690671f83f
fp=724d609337113c710550d7473c26763f6c67e6e2
Git-Tag-Tagger: Michael R. Crusoe <[email protected]>
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