Your message dated Wed, 02 Jul 2025 22:04:34 +0000
with message-id <e1ux5zc-00fqss...@fasolo.debian.org>
and subject line Bug#1100261: fixed in python-anndata 0.12.0~rc1-1
has caused the Debian Bug report #1100261,
regarding python-anndata compatibility with zarr3
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1100261: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1100261
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: python-anndata
Version: 0.10.6-1
Severity: wishlist
X-Debbugs-Cc: antonio.valent...@tiscali.it
Dear Maintainer,
please make python-anndata compatible with zarr3.
An upstream patch seems to be available:
https://github.com/scverse/anndata/pull/1726
If zarr in not essential for you package you could also consider
disabling support for it in python-anndata for the time being,
until a new upstream release compatible with zarr3 is available.
A package for zarr3 is available in experimental and can be used
test the compatibility.
It would be very nice to have zarr3 in testing before the freeze.
-- System Information:
Debian Release: trixie/sid
APT prefers unstable
APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Kernel: Linux 6.11.0-14-generic (SMP w/8 CPU threads; PREEMPT)
Locale: LANG=C, LC_CTYPE=C.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: unable to detect
--- End Message ---
--- Begin Message ---
Source: python-anndata
Source-Version: 0.12.0~rc1-1
Done: Alexandre Detiste <tc...@debian.org>
We believe that the bug you reported is fixed in the latest version of
python-anndata, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1100...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Alexandre Detiste <tc...@debian.org> (supplier of updated python-anndata
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Wed, 02 Jul 2025 14:13:39 +0200
Source: python-anndata
Architecture: source
Version: 0.12.0~rc1-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Alexandre Detiste <tc...@debian.org>
Closes: 1075928 1100261
Changes:
python-anndata (0.12.0~rc1-1) unstable; urgency=medium
.
* Team upload
* Remove dependency on python3-importlib-metadata
* Remove build dep on SetupTools, this uses Hatchling now
* python3-awkward is now packaged, use it
* python3-pyarrow is not yey packaged, skip it
* It build, Closes: #1075928
.
[ Diane Trout ]
* Add DEP-3 descriptions to skip test patches
.
[ Andreas Tille ]
* New upstream release candidate now supports zarr v3
Closes: #1100261
* Standards-Version: 4.7.2 (routine-update)
* Build-Depends: python3-filelock
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