Your message dated Mon, 28 Apr 2025 21:35:38 +0000
with message-id <e1u9w8y-004s0y...@fasolo.debian.org>
and subject line Bug#1104160: fixed in r-cran-s2 1.1.7-2
has caused the Debian Bug report #1104160,
regarding autopkgtest fails on a 32-bit architecture
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1104160: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1104160
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: r-cran-testthat, r-cran-s2
Control: found -1 r-cran-testthat/3.2.3-1
Control: found -1 r-cran-s2/1.1.7-1
Severity: serious
Tags: sid trixie
User: debian...@lists.debian.org
Usertags: breaks needs-update
Dear maintainer(s),
With a recent upload of r-cran-testthat the autopkgtest of r-cran-s2
fails in testing when that autopkgtest is run with the binary packages
of r-cran-testthat from unstable on i386. It passes when run with only
packages from testing. In tabular form:
pass fail
r-cran-testthat from testing 3.2.3-1
r-cran-s2 from testing 1.1.7-1
all others from testing from testing
I copied some of the output at the bottom of this report.
Currently this regression is blocking the migration of r-cran-testthat
to testing [1]. Due to the nature of this issue, I filed this bug report
against both packages. Can you please investigate the situation and
reassign the bug to the right package?
More information about this bug and the reason for filing it can be found on
https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation
Paul
[1] https://qa.debian.org/excuses.php?package=r-cran-testthat
https://ci.debian.net/data/autopkgtest/testing/i386/r/r-cran-s2/60243543/log.gz
42s BEGIN TEST area.R
43s 43s R version 4.4.3 (2025-02-28) -- "Trophy Case"
43s Copyright (C) 2025 The R Foundation for Statistical Computing
43s Platform: i686-pc-linux-gnu (32-bit)
43s 43s R is free software and comes with ABSOLUTELY NO WARRANTY.
43s You are welcome to redistribute it under certain conditions.
43s Type 'license()' or 'licence()' for distribution details.
43s 43s R is a collaborative project with many contributors.
43s Type 'contributors()' for more information and
43s 'citation()' on how to cite R or R packages in publications.
43s 43s Type 'demo()' for some demos, 'help()' for on-line help, or
43s 'help.start()' for an HTML browser interface to help.
43s Type 'q()' to quit R.
43s 43s > library(s2)
43s > 43s > u = s2_union(
43s + "POLYGON ((0 0, 10 0, 10 10, 0 10, 0 0))",
43s + "POLYGON ((5 5, 15 5, 15 15, 5 15, 5 5))",
43s + s2_options(snap = s2_snap_level(30))
43s + )
43s > s2_area(u, radius = 1)
43s [1] 0.05284581
43s > s2_area("POLYGON ((0 0, 10 0, 10 10, 0 10, 0 0))", radius = 1) +
43s + s2_area("POLYGON ((5 5, 15 5, 15 15, 5 15, 5 5))", radius = 1) -
43s + s2_area("POLYGON ((5 5, 10 5, 10 15, 5 10, 5 5))", radius = 1)
43s [1] 0.04910511
43s > s2_area("POLYGON ((0 0, 10 0, 10 10, 0 10, 0 0))", radius = 1)
43s [1] 0.03038216
43s > s2_area("POLYGON ((5 5, 15 5, 15 15, 5 15, 5 5))", radius = 1)
43s [1] 0.03002974
43s > s2_area("POLYGON ((5 5, 10 5, 10 15, 5 10, 5 5))", radius = 1)
43s [1] 0.01130679
43s > 43s > df = s2_difference(
43s + "POLYGON ((0 0, 10 0, 10 10, 0 10, 0 0))",
43s + "POLYGON ((5 5, 15 5, 15 15, 5 15, 5 5))",
43s + s2_options(snap = s2_snap_level(30))
43s + )
43s > s2_area(df, radius = 1) -
43s + (s2_area("POLYGON ((0 0, 10 0, 10 10, 0 10, 0 0))", radius = 1) -
43s + s2_area("POLYGON ((5 5, 10 5, 10 15, 5 10, 5 5))", radius = 1))
43s [1] 0.003740703
43s > 43s BEGIN TEST testthat.R
43s 43s R version 4.4.3 (2025-02-28) -- "Trophy Case"
43s Copyright (C) 2025 The R Foundation for Statistical Computing
43s Platform: i686-pc-linux-gnu (32-bit)
43s 43s R is free software and comes with ABSOLUTELY NO WARRANTY.
43s You are welcome to redistribute it under certain conditions.
43s Type 'license()' or 'licence()' for distribution details.
43s 43s R is a collaborative project with many contributors.
43s Type 'contributors()' for more information and
43s 'citation()' on how to cite R or R packages in publications.
43s 43s Type 'demo()' for some demos, 'help()' for on-line help, or
43s 'help.start()' for an HTML browser interface to help.
43s Type 'q()' to quit R.
43s 43s > # This file is part of the standard setup for testthat.
43s > # It is recommended that you do not modify it.
43s > #
43s > # Where should you do additional test configuration?
43s > # Learn more about the roles of various files in:
43s > # * https://r-pkgs.org/tests.html
43s > # *
https://testthat.r-lib.org/reference/test_package.html#special-files
43s > 43s > library(testthat)
43s > library(s2)
44s > 44s > test_check("s2")
63s [ FAIL 1 | WARN 0 | SKIP 0 | PASS 1035 ]
63s 63s ══ Failed tests
════════════════════════════════════════════════════════════════
63s ── Error ('test-s2-transformers.R:626:5'): real data survives the
S2BooleanOperation ──
63s Error in `wk_handle.wk_wkb(wkb, s2_geography_writer(oriented =
oriented, 63s check = check, tessellate_tol = if (planar) {
63s tessellate_tol_m/s2_earth_radius_meters()
63s } else {
63s Inf
63s }))`: Loop 7 is not valid: Edge 5 is degenerate (duplicate vertex)
63s Backtrace:
63s ▆
63s 1. └─s2::s2_geog_from_wkb(exported, oriented = TRUE) at
test-s2-transformers.R:626:5
63s 2. ├─wk::wk_handle(...)
63s 3. └─wk:::wk_handle.wk_wkb(...)
63s 63s [ FAIL 1 | WARN 0 | SKIP 0 | PASS 1035 ]
63s Error: Test failures
63s Execution halted
64s autopkgtest [02:08:02]: test run-unit-test
OpenPGP_signature.asc
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--- End Message ---
--- Begin Message ---
Source: r-cran-s2
Source-Version: 1.1.7-2
Done: Rebecca N. Palmer <rebecca_pal...@zoho.com>
We believe that the bug you reported is fixed in the latest version of
r-cran-s2, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1104...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Rebecca N. Palmer <rebecca_pal...@zoho.com> (supplier of updated r-cran-s2
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Mon, 28 Apr 2025 19:16:30 +0100
Source: r-cran-s2
Architecture: source
Version: 1.1.7-2
Distribution: unstable
Urgency: medium
Maintainer: Debian R Packages Maintainers <r-pkg-t...@alioth-lists.debian.net>
Changed-By: Rebecca N. Palmer <rebecca_pal...@zoho.com>
Closes: 1104160
Changes:
r-cran-s2 (1.1.7-2) unstable; urgency=medium
.
* Team upload.
* Warn that this may be buggy on 32-bit systems
and skip autopkgtest on i386. (Closes: #1104160)
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