Bug#1084239: marked as done (astroquery: FTBFS: failing tests)

[Debian Bug Tracking System]

Your message dated Tue, 26 Nov 2024 22:51:55 +0000
with message-id <e1tg4pt-008ye1...@fasolo.debian.org>
and subject line Bug#1084239: fixed in astroquery 0.4.7+dfsg-2
has caused the Debian Bug report #1084239,
regarding astroquery: FTBFS: failing tests
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
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immediately.)


-- 
1084239: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1084239
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems

--- Begin Message ---

Package: src:astroquery
Version: 0.4.7+dfsg-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:

--------------------------------------------------------------------------------
[...]
 debian/rules binary
dh binary --with python3,sphinxdoc --buildsystem=pybuild
   dh_update_autotools_config -O--buildsystem=pybuild
   dh_autoreconf -O--buildsystem=pybuild
   dh_auto_configure -O--buildsystem=pybuild
I: pybuild base:311: python3.12 setup.py config
WARNING: AstropyDeprecationWarning: The FixRemoteDataOption class is deprecated 
and may be removed in a future version. [astropy.tests.command]
/<<PKGBUILDDIR>>/astropy_helpers/astropy_helpers/setup_helpers.py:81: 
SetuptoolsDeprecationWarning: Deprecated API usage.
!!

        
********************************************************************************
        As setuptools moves its configuration towards `pyproject.toml`,
        `setuptools.config.read_configuration` became deprecated.


[... snipped ...]

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astroquery/alma/__init__.py:41: in <module>
    from .core 
import Alma, AlmaClass, ALMA_BANDS
astroquery/alma/core.py:12: in <module>
    from pkg_resources 
import resource_filename
/usr/lib/python3/dist-packages/pkg_resources/__init__.py:103: in 
<module>
    warnings.warn(
E   DeprecationWarning: pkg_resources is deprecated as an API. See 
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_ ERROR collecting 
.pybuild/cpython3_3.12_astroquery/build/astroquery/alma/tests/__init__.py _
/usr/lib/python3/dist-packages/pytest_doctestplus/plugin.py:271: 
in collect
    module = import_path(fspath, mode=mode, 
root=self.config.rootpath,
/usr/lib/python3/dist-packages/_pytest/pathlib.py:582: in 
import_path
    importlib.import_module(module_name)
/usr/lib/python3.12/importlib/__init__.py:90: in import_module
    return _bootstrap._gcd_import(name[level:], package, 
level)
<frozen importlib._bootstrap>:1387: in _gcd_import
    
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<frozen importlib._bootstrap>:935: in _load_unlocked
    
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<frozen importlib._bootstrap_external>:995: in exec_module
    
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<frozen importlib._bootstrap>:488: in _call_with_frames_removed
    
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astroquery/alma/__init__.py:41: in <module>
    from .core 
import Alma, AlmaClass, ALMA_BANDS
astroquery/alma/core.py:12: in <module>
    from pkg_resources 
import resource_filename
/usr/lib/python3/dist-packages/pkg_resources/__init__.py:103: in 
<module>
    warnings.warn(
E   DeprecationWarning: pkg_resources is deprecated as an API. See 
https://setuptools.pypa.io/en/latest/pkg_resources.html
_ ERROR collecting 
.pybuild/cpython3_3.12_astroquery/build/astroquery/alma/tests/setup_package.py 
_
/usr/lib/python3/dist-packages/pytest_doctestplus/plugin.py:271: 
in collect
    module = import_path(fspath, mode=mode, 
root=self.config.rootpath,
/usr/lib/python3/dist-packages/_pytest/pathlib.py:582: in 
import_path
    importlib.import_module(module_name)
/usr/lib/python3.12/importlib/__init__.py:90: in import_module
    return _bootstrap._gcd_import(name[level:], package, 
level)
<frozen importlib._bootstrap>:1387: in _gcd_import
    
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<frozen importlib._bootstrap>:1310: in _find_and_load_unlocked
    
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<frozen importlib._bootstrap>:488: in _call_with_frames_removed
    
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<frozen importlib._bootstrap>:1387: in _gcd_import
    
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<frozen importlib._bootstrap>:935: in _load_unlocked
    
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<frozen importlib._bootstrap_external>:995: in exec_module
    
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<frozen importlib._bootstrap>:488: in _call_with_frames_removed
    
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astroquery/alma/__init__.py:41: in <module>
    from .core 
import Alma, AlmaClass, ALMA_BANDS
astroquery/alma/core.py:12: in <module>
    from pkg_resources 
import resource_filename
/usr/lib/python3/dist-packages/pkg_resources/__init__.py:103: in 
<module>
    warnings.warn(
E   DeprecationWarning: pkg_resources is deprecated as an API. See 
https://setuptools.pypa.io/en/latest/pkg_resources.html
_ ERROR collecting 
.pybuild/cpython3_3.12_astroquery/build/astroquery/alma/tests/test_alma.py _
/usr/lib/python3/dist-packages/pytest_doctestplus/plugin.py:271: 
in collect
    module = import_path(fspath, mode=mode, 
root=self.config.rootpath,
/usr/lib/python3/dist-packages/_pytest/pathlib.py:582: in 
import_path
    importlib.import_module(module_name)
/usr/lib/python3.12/importlib/__init__.py:90: in import_module
    return _bootstrap._gcd_import(name[level:], package, 
level)
<frozen importlib._bootstrap>:1387: in _gcd_import
    
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<frozen importlib._bootstrap>:1360: in _find_and_load
    
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<frozen importlib._bootstrap>:1310: in _find_and_load_unlocked
    
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<frozen importlib._bootstrap>:488: in _call_with_frames_removed
    
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<frozen importlib._bootstrap>:1331: in _find_and_load_unlocked
    
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<frozen importlib._bootstrap>:935: in _load_unlocked
    
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<frozen importlib._bootstrap_external>:995: in exec_module
    
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<frozen importlib._bootstrap>:488: in _call_with_frames_removed
    
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astroquery/alma/__init__.py:41: in <module>
    from .core 
import Alma, AlmaClass, ALMA_BANDS
astroquery/alma/core.py:12: in <module>
    from pkg_resources 
import resource_filename
/usr/lib/python3/dist-packages/pkg_resources/__init__.py:103: in 
<module>
    warnings.warn(
E   DeprecationWarning: pkg_resources is deprecated as an API. See 
https://setuptools.pypa.io/en/latest/pkg_resources.html
_ ERROR collecting 
.pybuild/cpython3_3.12_astroquery/build/astroquery/alma/tests/test_alma.py _
/usr/lib/python3.12/importlib/__init__.py:90: in import_module
    return _bootstrap._gcd_import(name[level:], package, 
level)
<frozen importlib._bootstrap>:1387: in _gcd_import
    
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<frozen importlib._bootstrap>:1360: in _find_and_load
    
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<frozen importlib._bootstrap>:1310: in _find_and_load_unlocked
    
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<frozen importlib._bootstrap>:488: in _call_with_frames_removed
    
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<frozen importlib._bootstrap>:1387: in _gcd_import
    
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<frozen importlib._bootstrap>:1310: in _find_and_load_unlocked
    
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<frozen importlib._bootstrap>:488: in _call_with_frames_removed
    
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<frozen importlib._bootstrap>:1387: in _gcd_import
    
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<frozen importlib._bootstrap>:935: in _load_unlocked
    
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<frozen importlib._bootstrap_external>:995: in exec_module
    
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<frozen importlib._bootstrap>:488: in _call_with_frames_removed
    
???
astroquery/alma/__init__.py:41: in <module>
    from .core 
import Alma, AlmaClass, ALMA_BANDS
astroquery/alma/core.py:12: in <module>
    from pkg_resources 
import resource_filename
/usr/lib/python3/dist-packages/pkg_resources/__init__.py:103: in 
<module>
    warnings.warn(
E   DeprecationWarning: pkg_resources is deprecated as an API. See 
https://setuptools.pypa.io/en/latest/pkg_resources.html
_ ERROR collecting 
.pybuild/cpython3_3.12_astroquery/build/astroquery/alma/tests/test_alma_auth.py 
_
/usr/lib/python3/dist-packages/pytest_doctestplus/plugin.py:271: 
in collect
    module = import_path(fspath, mode=mode, 
root=self.config.rootpath,
/usr/lib/python3/dist-packages/_pytest/pathlib.py:582: in 
import_path
    importlib.import_module(module_name)
/usr/lib/python3.12/importlib/__init__.py:90: in import_module
    return _bootstrap._gcd_import(name[level:], package, 
level)
<frozen importlib._bootstrap>:1387: in _gcd_import
    
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<frozen importlib._bootstrap>:1360: in _find_and_load
    
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<frozen importlib._bootstrap>:1310: in _find_and_load_unlocked
    
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<frozen importlib._bootstrap>:488: in _call_with_frames_removed
    
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<frozen importlib._bootstrap_external>:995: in exec_module
    
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<frozen importlib._bootstrap>:488: in _call_with_frames_removed
    
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astroquery/alma/__init__.py:41: in <module>
    from .core 
import Alma, AlmaClass, ALMA_BANDS
astroquery/alma/core.py:12: in <module>
    from pkg_resources 
import resource_filename
/usr/lib/python3/dist-packages/pkg_resources/__init__.py:103: in 
<module>
    warnings.warn(
E   DeprecationWarning: pkg_resources is deprecated as an API. See 
https://setuptools.pypa.io/en/latest/pkg_resources.html
_ ERROR collecting 
.pybuild/cpython3_3.12_astroquery/build/astroquery/alma/tests/test_alma_auth.py 
_
/usr/lib/python3.12/importlib/__init__.py:90: in import_module
    return _bootstrap._gcd_import(name[level:], package, 
level)
<frozen importlib._bootstrap>:1387: in _gcd_import
    
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<frozen importlib._bootstrap>:1360: in _find_and_load
    
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<frozen importlib._bootstrap>:1310: in _find_and_load_unlocked
    
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<frozen importlib._bootstrap_external>:995: in exec_module
    
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<frozen importlib._bootstrap>:488: in _call_with_frames_removed
    
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astroquery/alma/__init__.py:41: in <module>
    from .core 
import Alma, AlmaClass, ALMA_BANDS
astroquery/alma/core.py:12: in <module>
    from pkg_resources 
import resource_filename
/usr/lib/python3/dist-packages/pkg_resources/__init__.py:103: in 
<module>
    warnings.warn(
E   DeprecationWarning: pkg_resources is deprecated as an API. See 
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_ ERROR collecting 
.pybuild/cpython3_3.12_astroquery/build/astroquery/alma/tests/test_alma_remote.py
 _
/usr/lib/python3/dist-packages/pytest_doctestplus/plugin.py:271: 
in collect
    module = import_path(fspath, mode=mode, 
root=self.config.rootpath,
/usr/lib/python3/dist-packages/_pytest/pathlib.py:582: in 
import_path
    importlib.import_module(module_name)
/usr/lib/python3.12/importlib/__init__.py:90: in import_module
    return _bootstrap._gcd_import(name[level:], package, 
level)
<frozen importlib._bootstrap>:1387: in _gcd_import
    
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<frozen importlib._bootstrap>:1360: in _find_and_load
    
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<frozen importlib._bootstrap>:1310: in _find_and_load_unlocked
    
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<frozen importlib._bootstrap_external>:995: in exec_module
    
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<frozen importlib._bootstrap>:488: in _call_with_frames_removed
    
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astroquery/alma/__init__.py:41: in <module>
    from .core 
import Alma, AlmaClass, ALMA_BANDS
astroquery/alma/core.py:12: in <module>
    from pkg_resources 
import resource_filename
/usr/lib/python3/dist-packages/pkg_resources/__init__.py:103: in 
<module>
    warnings.warn(
E   DeprecationWarning: pkg_resources is deprecated as an API. See 
https://setuptools.pypa.io/en/latest/pkg_resources.html
_ ERROR collecting 
.pybuild/cpython3_3.12_astroquery/build/astroquery/alma/tests/test_alma_remote.py
 _
/usr/lib/python3.12/importlib/__init__.py:90: in import_module
    return _bootstrap._gcd_import(name[level:], package, 
level)
<frozen importlib._bootstrap>:1387: in _gcd_import
    
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<frozen importlib._bootstrap_external>:995: in exec_module
    
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<frozen importlib._bootstrap>:488: in _call_with_frames_removed
    
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astroquery/alma/__init__.py:41: in <module>
    from .core 
import Alma, AlmaClass, ALMA_BANDS
astroquery/alma/core.py:12: in <module>
    from pkg_resources 
import resource_filename
/usr/lib/python3/dist-packages/pkg_resources/__init__.py:103: in 
<module>
    warnings.warn(
E   DeprecationWarning: pkg_resources is deprecated as an API. See 
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_ ERROR collecting 
.pybuild/cpython3_3.12_astroquery/build/astroquery/alma/tests/test_alma_utils.py
 _
/usr/lib/python3/dist-packages/pytest_doctestplus/plugin.py:271: 
in collect
    module = import_path(fspath, mode=mode, 
root=self.config.rootpath,
/usr/lib/python3/dist-packages/_pytest/pathlib.py:582: in 
import_path
    importlib.import_module(module_name)
/usr/lib/python3.12/importlib/__init__.py:90: in import_module
    return _bootstrap._gcd_import(name[level:], package, 
level)
<frozen importlib._bootstrap>:1387: in _gcd_import
    
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<frozen importlib._bootstrap>:1360: in _find_and_load
    
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<frozen importlib._bootstrap>:1310: in _find_and_load_unlocked
    
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<frozen importlib._bootstrap>:1331: in _find_and_load_unlocked
    
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<frozen importlib._bootstrap>:935: in _load_unlocked
    
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<frozen importlib._bootstrap_external>:995: in exec_module
    
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<frozen importlib._bootstrap>:488: in _call_with_frames_removed
    
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astroquery/alma/__init__.py:41: in <module>
    from .core 
import Alma, AlmaClass, ALMA_BANDS
astroquery/alma/core.py:12: in <module>
    from pkg_resources 
import resource_filename
/usr/lib/python3/dist-packages/pkg_resources/__init__.py:103: in 
<module>
    warnings.warn(
E   DeprecationWarning: pkg_resources is deprecated as an API. See 
https://setuptools.pypa.io/en/latest/pkg_resources.html
_ ERROR collecting 
.pybuild/cpython3_3.12_astroquery/build/astroquery/alma/tests/test_alma_utils.py
 _
/usr/lib/python3.12/importlib/__init__.py:90: in import_module
    return _bootstrap._gcd_import(name[level:], package, 
level)
<frozen importlib._bootstrap>:1387: in _gcd_import
    
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<frozen importlib._bootstrap>:1360: in _find_and_load
    
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<frozen importlib._bootstrap>:1310: in _find_and_load_unlocked
    
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<frozen importlib._bootstrap>:935: in _load_unlocked
    
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<frozen importlib._bootstrap_external>:995: in exec_module
    
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<frozen importlib._bootstrap>:488: in _call_with_frames_removed
    
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astroquery/alma/__init__.py:41: in <module>
    from .core 
import Alma, AlmaClass, ALMA_BANDS
astroquery/alma/core.py:12: in <module>
    from pkg_resources 
import resource_filename
/usr/lib/python3/dist-packages/pkg_resources/__init__.py:103: in 
<module>
    warnings.warn(
E   DeprecationWarning: pkg_resources is deprecated as an API. See 
https://setuptools.pypa.io/en/latest/pkg_resources.html
_ ERROR collecting 
.pybuild/cpython3_3.12_astroquery/build/astroquery/alma/utils.py _
/usr/lib/python3/dist-packages/pytest_doctestplus/plugin.py:271: 
in collect
    module = import_path(fspath, mode=mode, 
root=self.config.rootpath,
/usr/lib/python3/dist-packages/_pytest/pathlib.py:582: in 
import_path
    importlib.import_module(module_name)
/usr/lib/python3.12/importlib/__init__.py:90: in import_module
    return _bootstrap._gcd_import(name[level:], package, 
level)
<frozen importlib._bootstrap>:1387: in _gcd_import
    
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<frozen importlib._bootstrap>:1360: in _find_and_load
    
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<frozen importlib._bootstrap>:1310: in _find_and_load_unlocked
    
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<frozen importlib._bootstrap>:488: in _call_with_frames_removed
    
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<frozen importlib._bootstrap>:1387: in _gcd_import
    
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<frozen importlib._bootstrap>:935: in _load_unlocked
    
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<frozen importlib._bootstrap_external>:995: in exec_module
    
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<frozen importlib._bootstrap>:488: in _call_with_frames_removed
    
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astroquery/alma/__init__.py:41: in <module>
    from .core 
import Alma, AlmaClass, ALMA_BANDS
astroquery/alma/core.py:12: in <module>
    from pkg_resources 
import resource_filename
/usr/lib/python3/dist-packages/pkg_resources/__init__.py:103: in 
<module>
    warnings.warn(
E   DeprecationWarning: pkg_resources is deprecated as an API. See 
https://setuptools.pypa.io/en/latest/pkg_resources.html
_ ERROR collecting 
.pybuild/cpython3_3.12_astroquery/build/astroquery/ipac/nexsci/nasa_exoplanet_archive/tests/test_nasa_exoplanet_archive.py
 _
astroquery/ipac/nexsci/nasa_exoplanet_archive/tests/test_nasa_exoplanet_archive.py:9:
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pkg_resources
/usr/lib/python3/dist-packages/pkg_resources/__init__.py:103: in 
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    warnings.warn(
E   DeprecationWarning: pkg_resources is deprecated as an API. See 
https://setuptools.pypa.io/en/latest/pkg_resources.html
_ ERROR collecting 
.pybuild/cpython3_3.12_astroquery/build/astroquery/ipac/nexsci/nasa_exoplanet_archive/tests/test_nasa_exoplanet_archive.py
 _
astroquery/ipac/nexsci/nasa_exoplanet_archive/tests/test_nasa_exoplanet_archive.py:9:
 in <module>
    import 
pkg_resources
/usr/lib/python3/dist-packages/pkg_resources/__init__.py:103: in 
<module>
    warnings.warn(
E   DeprecationWarning: pkg_resources is deprecated as an API. See 
https://setuptools.pypa.io/en/latest/pkg_resources.html
=========================== short test summary info 
============================
ERROR astroquery/alma/__init__.py - DeprecationWarning: pkg_resources 
is deprecated as an API. See https://setu...
ERROR astroquery/alma/core.py - DeprecationWarning: pkg_resources is 
deprecated as an API. See https://setu...
ERROR astroquery/alma/setup_package.py - DeprecationWarning: 
pkg_resources is deprecated as an API. See https://setu...
ERROR astroquery/alma/tapsql.py - DeprecationWarning: pkg_resources is 
deprecated as an API. See https://setu...
ERROR astroquery/alma/tests/__init__.py - DeprecationWarning: 
pkg_resources is deprecated as an API. See https://setu...
ERROR astroquery/alma/tests/setup_package.py - DeprecationWarning: 
pkg_resources is deprecated as an API. See https://setu...
ERROR astroquery/alma/tests/test_alma.py - DeprecationWarning: 
pkg_resources is deprecated as an API. See https://setu...
ERROR astroquery/alma/tests/test_alma.py - DeprecationWarning: 
pkg_resources is deprecated as an API. See https://setu...
ERROR astroquery/alma/tests/test_alma_auth.py - DeprecationWarning: 
pkg_resources is deprecated as an API. See https://setu...
ERROR astroquery/alma/tests/test_alma_auth.py - DeprecationWarning: 
pkg_resources is deprecated as an API. See https://setu...
ERROR astroquery/alma/tests/test_alma_remote.py - DeprecationWarning: 
pkg_resources is deprecated as an API. See https://setu...
ERROR astroquery/alma/tests/test_alma_remote.py - DeprecationWarning: 
pkg_resources is deprecated as an API. See https://setu...
ERROR astroquery/alma/tests/test_alma_utils.py - DeprecationWarning: 
pkg_resources is deprecated as an API. See https://setu...
ERROR astroquery/alma/tests/test_alma_utils.py - DeprecationWarning: 
pkg_resources is deprecated as an API. See https://setu...
ERROR astroquery/alma/utils.py - DeprecationWarning: pkg_resources is 
deprecated as an API. See https://setu...
ERROR 
astroquery/ipac/nexsci/nasa_exoplanet_archive/tests/test_nasa_exoplanet_archive.py
 - DeprecationWarning: pkg_resources is deprecated as an API. See 
https://setu...
ERROR 
astroquery/ipac/nexsci/nasa_exoplanet_archive/tests/test_nasa_exoplanet_archive.py
 - DeprecationWarning: pkg_resources is deprecated as an API. See 
https://setu...
!!!!!!!!!!!!!!!!!!! Interrupted: 17 errors during collection !!!!!!!!!!!!!!!!!!!
======================== 6 skipped, 17 errors 
in 4.50s =========================
E: pybuild pybuild:389: test: plugin distutils failed with: exit code=2: cd 
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_astroquery/build; python3.12 -m pytest
dh_auto_test: error: pybuild --test -i python{version} -p 3.12 returned exit 
code 13
make: *** [debian/rules:13: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------

The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:

https://people.debian.org/~sanvila/build-logs/202410/

About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.

If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.

If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.

Thanks.

--- End Message ---

--- Begin Message ---

Source: astroquery
Source-Version: 0.4.7+dfsg-2
Done: Ole Streicher <oleb...@debian.org>

We believe that the bug you reported is fixed in the latest version of
astroquery, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1084...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Ole Streicher <oleb...@debian.org> (supplier of updated astroquery package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Tue, 26 Nov 2024 21:09:23 +0100
Source: astroquery
Architecture: source
Version: 0.4.7+dfsg-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Astro Team <debian-astro-maintain...@lists.alioth.debian.org>
Changed-By: Ole Streicher <oleb...@debian.org>
Closes: 1084239
Changes:
 astroquery (0.4.7+dfsg-2) unstable; urgency=medium
 .
   * Team upload.
   * Ignore all deprecation warnings. (Closes: #1084239)
   * Fix for sudden astropy change
   * Change test to be Python 3.13 compatible
Checksums-Sha1:
 204877347745c515254d40aabfab4cfb486fbfca 2444 astroquery_0.4.7+dfsg-2.dsc
 5259ae41186b8d8167939d044b91a254ea7877b2 13296 
astroquery_0.4.7+dfsg-2.debian.tar.xz
Checksums-Sha256:
 fe5e0e1afae7d59a56ed5e3e54b5d1c87e2097a33f1d5143afaf455f71d56105 2444 
astroquery_0.4.7+dfsg-2.dsc
 a805ec823dfc258a6a43225ccb8ed680d181b730c010113bb43463c1eae064fe 13296 
astroquery_0.4.7+dfsg-2.debian.tar.xz
Files:
 f47a90fa33fe19f5b2f6ffd741964785 2444 python optional 
astroquery_0.4.7+dfsg-2.dsc
 2ea5df8bac16ae2d529bc4b9f86eafe3 13296 python optional 
astroquery_0.4.7+dfsg-2.debian.tar.xz

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--- End Message ---