Your message dated Mon, 25 Nov 2024 21:34:43 +0000
with message-id <e1tfgjd-003rmc...@fasolo.debian.org>
and subject line Bug#1081876: fixed in python-meshplex 0.17.1-4
has caused the Debian Bug report #1081876,
regarding python-meshplex: FTBFS: FAILED
tests/test_remove_cells.py::test_remove_cells_boundary - assert False
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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immediately.)
--
1081876: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1081876
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:python-meshplex
Version: 0.17.1-3
Severity: serious
Tags: ftbfs
Dear maintainer:
During a rebuild of all packages in unstable, your package failed to build:
--------------------------------------------------------------------------------
[...]
debian/rules binary
dh binary --with python3,sphinxdoc --buildsystem=pybuild
dh_update_autotools_config -O--buildsystem=pybuild
dh_autoreconf -O--buildsystem=pybuild
dh_auto_configure -O--buildsystem=pybuild
dh_auto_build -O--buildsystem=pybuild
I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build"
module
I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel
--outdir /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_meshplex
* Building wheel...
Successfully built meshplex-0.17.1-py3-none-any.whl
I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with
"installer" module
debian/rules execute_after_dh_auto_build-indep
make[1]: Entering directory '/<<PKGBUILDDIR>>'
PYTHONPATH=.pybuild/cpython3_3.12_meshplex/build sphinx-build -M html docs/
.pybuild/docs
Running Sphinx v7.4.7
loading translations [en]... done
making output directory... done
building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 1 source files that are out of date
updating environment: [new config] 1 added, 0 changed, 0 removed
reading sources... [100%] index
looking for now-outdated files... none found
pickling environment... done
checking consistency... done
preparing documents... done
copying assets...
copying static files... done
copying extra files... done
copying assets: done
writing output... [100%] index
generating indices... genindex py-modindex done
writing additional pages... search done
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded.
The HTML pages are in .pybuild/docs/html.
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
MPLBACKEND=Agg dh_auto_test -- --test-args="--ignore-glob=*test_io*"
I: pybuild base:311: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_meshplex/build;
python3.12 -m pytest --ignore-glob=*test_io*
============================= test session starts ==============================
platform linux -- Python 3.12.6, pytest-8.3.2, pluggy-1.5.0
rootdir: /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_meshplex/build
configfile: pyproject.toml
plugins: typeguard-4.3.0
collected 112 items
tests/mesh_tri/test_curl.py . [ 0%]
tests/mesh_tri/test_edge_flip.py .............. [ 13%]
tests/mesh_tri/test_genus.py . [ 14%]
tests/mesh_tri/test_mesh_tri.py ...................... [ 33%]
tests/mesh_tri/test_plot.py .. [ 35%]
tests/mesh_tri/test_remove_points.py . [ 36%]
tests/test_ce_ratios.py .... [ 40%]
tests/test_cell_partitions.py .... [ 43%]
tests/test_circumcenters.py .... [ 47%]
tests/test_compute_cell_values.py . [ 48%]
tests/test_control_volume_centroids.py ... [ 50%]
tests/test_control_volumes.py ..... [ 55%]
tests/test_create_facets.py s... [ 58%]
tests/test_degenerate.py .... [ 62%]
tests/test_gh_issues.py .. [ 64%]
tests/test_heights.py ... [ 66%]
tests/test_mesh_line.py . [ 67%]
tests/test_mesh_tetra.py .........s [ 76%]
tests/test_remove_cells.py ....F...... [ 86%]
tests/test_signed_area.py ........ [ 93%]
tests/test_subdomain.py ... [ 96%]
tests/test_volumes.py .... [100%]
=================================== FAILURES ===================================
__________________________ test_remove_cells_boundary __________________________
def test_remove_cells_boundary():
mesh = get_mesh1()
assert np.all(mesh.is_boundary_point == [True, True, True, True, False])
assert np.all(mesh.is_boundary_facet_local[0] == [False, False, False,
False])
assert np.all(mesh.is_boundary_facet_local[1] == [False, False, False,
True])
assert np.all(mesh.is_boundary_facet_local[2] == [True, True, True,
False])
assert np.all(
mesh.is_boundary_facet == [True, True, False, True, False, True,
False, False]
)
assert np.all(mesh.is_boundary_cell)
assert np.all(mesh.facets_cells_idx == [0, 1, 0, 2, 1, 3, 2, 3])
# cell id:
assert np.all(mesh.facets_cells["boundary"][1] == [0, 3, 1, 2])
# local edge:
assert np.all(mesh.facets_cells["boundary"][2] == [2, 1, 2, 2])
# cell id:
assert np.all(
mesh.facets_cells["interior"][1:3].T == [[0, 3], [0, 1], [1, 2],
[2, 3]]
)
E assert False
E + where False = <function all at 0x7f9128cebc70>(array([[3, 0]...
[2, 3]]) == [[0, 3], [0, ...1, 2], [2, 3]]
E + where <function all at 0x7f9128cebc70> = np.all
E
E Use -v to get more diff)
tests/test_remove_cells.py:104: AssertionError
=============================== warnings summary ===============================
tests/mesh_tri/test_mesh_tri.py: 1 warning
tests/mesh_tri/test_remove_points.py: 1 warning
tests/test_remove_cells.py: 10 warnings
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_meshplex/build/meshplex/_mesh.py:260:
RuntimeWarning: invalid value encountered in divide
self._cv_centroids = (integral_p.T / cv).T
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
=========================== short test summary info ============================
FAILED tests/test_remove_cells.py::test_remove_cells_boundary - assert False
============ 1 failed, 109 passed, 2 skipped, 12 warnings in 2.17s =============
E: pybuild pybuild:389: test: plugin pyproject failed with: exit code=1: cd
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_meshplex/build; python3.12 -m pytest
--ignore-glob=*test_io*
dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.12
--test-args=--ignore-glob=\*test_io\* returned exit code 13
make[1]: *** [debian/rules:23: override_dh_auto_test] Error 25
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:11: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:
https://people.debian.org/~sanvila/build-logs/202409/
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.
Thanks.
--- End Message ---
--- Begin Message ---
Source: python-meshplex
Source-Version: 0.17.1-4
Done: Santiago Vila <sanv...@debian.org>
We believe that the bug you reported is fixed in the latest version of
python-meshplex, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1081...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Santiago Vila <sanv...@debian.org> (supplier of updated python-meshplex package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Mon, 25 Nov 2024 21:40:00 +0100
Source: python-meshplex
Architecture: source
Version: 0.17.1-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<debian-science-maintain...@lists.alioth.debian.org>
Changed-By: Santiago Vila <sanv...@debian.org>
Closes: 1081876
Changes:
python-meshplex (0.17.1-4) unstable; urgency=medium
.
* Team upload.
* Add disable-test-remove-cells-boundary.patch. Closes: #1081876.
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