Package: src:rmpi
Version: 0.7-2.1-1
Severity: serious
Tags: ftbfs
Dear maintainer:
During a rebuild of all packages in unstable, your package failed to build:
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[...]
debian/rules build
RExtraInstallFlags="--no-test-load" dh build --buildsystem R
dh_update_autotools_config -O--buildsystem=R
dh_autoreconf -O--buildsystem=R
dh_auto_configure -O--buildsystem=R
dh_auto_build -O--buildsystem=R
dh_auto_test -O--buildsystem=R
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary
RExtraInstallFlags="--no-test-load" dh binary --buildsystem R
dh_testroot -O--buildsystem=R
dh_prep -O--buildsystem=R
dh_auto_install --destdir=debian/r-cran-rmpi/ -O--buildsystem=R
I: R Package: Rmpi Version: 0.7-2.1
I: Building using R version 4.4.1-3
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Mon, 23 Sep 2024 07:04:44 -0500
mkdir -p /<<PKGBUILDDIR>>/debian/r-cran-rmpi/usr/lib/R/site-library
I: Using extra install flags: --no-test-load
R CMD INSTALL -l /<<PKGBUILDDIR>>/debian/r-cran-rmpi/usr/lib/R/site-library
--clean --no-test-load . "--built-timestamp='Mon, 23 Sep 2024 07:04:44 -0500'"
* installing *source* package ‘Rmpi’ ...
files ‘configure’, ‘configure.ac’ have the wrong MD5 checksums
** using staged installation
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking for pkg-config... /usr/bin/pkg-config
checking if pkg-config knows about OpenMPI... yes
checking for orted... no
configure: error: Cannot find orted. Rmpi needs orted to run.
ERROR: configuration failed for package ‘Rmpi’
* removing ‘/<<PKGBUILDDIR>>/debian/r-cran-rmpi/usr/lib/R/site-library/Rmpi’
dh_auto_install: error: R CMD INSTALL -l
/<<PKGBUILDDIR>>/debian/r-cran-rmpi/usr/lib/R/site-library --clean --no-test-load .
"--built-timestamp='Mon, 23 Sep 2024 07:04:44 -0500'" returned exit code 1
make: *** [debian/rules:7: binary] Error 25
dpkg-buildpackage: error: fakeroot debian/rules binary subprocess returned exit
status 2
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The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:
https://people.debian.org/~sanvila/build-logs/202410/
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.
Thanks.
