Source: h5py Version: 3.11.0-5 Severity: serious User: debian...@lists.debian.org Usertags: regression
Hi Maintainer Since the upload of mpi-defaults 1.17, the autopkgtests of h5py have regressed on 32-bit architectures [1]: I've copied what I hope is the relevant part of the log below. Regards Graham [1] https://ci.debian.net/packages/h/h5py/testing/armhf/ 158s system msg for write_line failure : Bad file descriptor 158s [cli_2]: PMIU_write error; fd=15 buf=:cmd=abort exitcode=-1 message=PMI_Init failed 158s : 158s system msg for write_line failure : Bad file descriptor 158s [cli_2]: PMIU_write error; fd=15 buf=:cmd=get_appnum 158s : 158s system msg for write_line failure : Bad file descriptor 158s Fatal error in internal_Init_thread: Other MPI error, error stack: 158s internal_Init_thread(48394): MPI_Init_thread(argc=(nil), argv=(nil), required=3, provided=0xff82d538) failed 158s MPII_Init_thread(195)......: 158s MPIR_pmi_init(149).........: 158s (unknown)(): Other MPI error 158s [cli_2]: PMIU_write error; fd=15 buf=:cmd=abort exitcode=404350991 message=Fatal error in internal_Init_thread: Other MPI error, error stack: 158s internal_Init_thread(48394): MPI_Init_thread(argc=(nil), argv=(nil), required=3, provided=0xff82d538) failed 158s MPII_Init_thread(195)......: 158s MPIR_pmi_init(149).........: 158s (unknown)(): Other MPI error 158s : 158s system msg for write_line failure : Bad file descriptor 158s cmd=init pmi_version=1 pmi_subversion=1 158s cmd=abort exitcode=-1 message=PMI_Init failed 158s cmd=get_appnum 158s Fatal error in internal_Init_thread: Other MPI error, error stack: 158s internal_Init_thread(48394): MPI_Init_thread(argc=(nil), argv=(nil), required=3, provided=0xfffca0a8) failed 158s MPII_Init_thread(195)......: 158s MPIR_pmi_init(149).........: 158s (unknown)(): Other MPI error 158s cmd=abort exitcode=739895311 message=Fatal error in internal_Init_thread: Other MPI error, error stack: 158s internal_Init_thread(48394): MPI_Init_thread(argc=(nil), argv=(nil), required=3, provided=0xfffca0a8) failed 158s MPII_Init_thread(195)......: 158s MPIR_pmi_init(149).........: 158s (unknown)(): Other MPI error 158s [cli_3]: PMIU_write error; fd=19 buf=:cmd=init pmi_version=1 pmi_subversion=1 158s : 158s system msg for write_line failure : Bad file descriptor 158s [cli_3]: PMIU_write error; fd=19 buf=:cmd=abort exitcode=-1 message=PMI_Init failed 158s : 158s system msg for write_line failure : Bad file descriptor 158s [cli_3]: PMIU_write error; fd=19 buf=:cmd=get_appnum 158s : 158s system msg for write_line failure : Bad file descriptor 158s Fatal error in internal_Init_thread: Other MPI error, error stack: 158s internal_Init_thread(48394): MPI_Init_thread(argc=(nil), argv=(nil), required=3, provided=0xffee5d38) failed 158s MPII_Init_thread(195)......: 158s MPIR_pmi_init(149).........: 158s (unknown)(): Other MPI error 158s [cli_3]: PMIU_write error; fd=19 buf=:cmd=abort exitcode=404350991 message=Fatal error in internal_Init_thread: Other MPI error, error stack: 158s internal_Init_thread(48394): MPI_Init_thread(argc=(nil), argv=(nil), required=3, provided=0xffee5d38) failed 158s MPII_Init_thread(195)......: 158s MPIR_pmi_init(149).........: 158s (unknown)(): Other MPI error 158s : 158s system msg for write_line failure : Bad file descriptor 158s PASSED [ 75%] 158s tests/test_ros3.py::test_ros3_temp_token SKIPPED (AWS S3 access toke...) [100%]Fatal error in internal_Init_thread: Other MPI error, error stack: 158s internal_Init_thread(48394): MPI_Init_thread(argc=(nil), argv=(nil), required=3, provided=0xff8e4e68) failed 158s MPII_Init_thread(195)......: 158s MPIR_pmi_init(149).........: 158s (unknown)(): Other MPI error 158s autopkgtest [12:30:09]: test python3-mpi-network: -----------------------]
