Your message dated Wed, 07 Aug 2024 15:30:45 +0000
with message-id <e1sbicf-00caas...@fasolo.debian.org>
and subject line Bug#1078087: fixed in bowtie2 2.5.4-1
has caused the Debian Bug report #1078087,
regarding bowtie2: test dependency on non-free libmath-random-perl
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
1078087: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1078087
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: bowtie2
Version: 2.5.3-1
Severity: serious
This package has a test dependency (as in debian/tests/control)
on libmath-random-perl, which is non-free.
>From https://ftp-master.debian.org/REJECT-FAQ.html , "Non-Main II":
Tests, including autopkgtests, are part of our build
process. Packages in Main can only require packages in Main to
run their tests (both build time and autopkgtest). Downloading
unpackaged programs, depending on contrib/non-free packages,
etc. are not acceptable for Main. We are just adding this now
as it turns out this wasn't nearly as obvious to some of you as
it was to the FTP Team.
--
Niko Tyni nt...@debian.org
--- End Message ---
--- Begin Message ---
Source: bowtie2
Source-Version: 2.5.4-1
Done: Andreas Tille <ti...@debian.org>
We believe that the bug you reported is fixed in the latest version of
bowtie2, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1078...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated bowtie2 package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Wed, 07 Aug 2024 13:31:40 +0200
Source: bowtie2
Architecture: source
Version: 2.5.4-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Andreas Tille <ti...@debian.org>
Closes: 1078087
Changes:
bowtie2 (2.5.4-1) unstable; urgency=medium
.
* Remove libmath-random-perl from Test-Depends and complete patch removing
tests needing this module
Closes: #1078087
* New upstream version
* Standards-Version: 4.7.0 (routine-update)
Checksums-Sha1:
ffe94a50f8165c11b9c476ebf43d59a4bf2a3295 2405 bowtie2_2.5.4-1.dsc
e76be3d7aed9a1f05b743811b4a11fc62f9971aa 10638569 bowtie2_2.5.4.orig.tar.gz
e5d09b9614e25e396c06522903f13de380e068c9 22616 bowtie2_2.5.4-1.debian.tar.xz
cf30fe0ed0aa9653cf53a7f840fca93d261e804e 7442 bowtie2_2.5.4-1_amd64.buildinfo
Checksums-Sha256:
194d72329093563c1c1845b59fec1ef28cbb41795bd76748e44a8c130fbdffd9 2405
bowtie2_2.5.4-1.dsc
841a6a60111b690c11d1e123cb5c11560b4cd1502b5cee7e394fd50f83e74e13 10638569
bowtie2_2.5.4.orig.tar.gz
83051931731bd5e23f0600da98cea0867caed701445cb573bc399b918f49e194 22616
bowtie2_2.5.4-1.debian.tar.xz
cd6ebbe0ff832ddda689eb6ac05602cc232954405d882eb36574858291f6499a 7442
bowtie2_2.5.4-1_amd64.buildinfo
Files:
3d7a52188f5f2453761085c9a90e916d 2405 science optional bowtie2_2.5.4-1.dsc
c51944797f47e0c82f3c3041a4a5d355 10638569 science optional
bowtie2_2.5.4.orig.tar.gz
4fcc7e0fa83f8df6bc1ff87bdc06c713 22616 science optional
bowtie2_2.5.4-1.debian.tar.xz
76e1c66735a130ca27c8fd8a2759d697 7442 science optional
bowtie2_2.5.4-1_amd64.buildinfo
-----BEGIN PGP SIGNATURE-----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=UsHQ
-----END PGP SIGNATURE-----
pgpKpBwaJAUjS.pgp
Description: PGP signature
--- End Message ---
