Your message dated Wed, 17 Jul 2024 10:49:19 +0200
with message-id <9b3d515cbdf8098bca798bffaf6e5...@debian.org>
and subject line Ere: Bug#1076232 fenics-dolfinx: FTBFS with mpich as default
MPI provier on 32 bit architectures
has caused the Debian Bug report #1076232,
regarding fenics-dolfinx: FTBFS with mpich as default MPI provier on 32 bit
architectures: E: pybuild pybuild:435: plugin pyproject failed: exit code=1: cd
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_dolfinx-real/build; python3.12 -m
pytest --durations=20 -k "not ( test_cube_distance )"
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1076232: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1076232
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: fenics-dolfinx
Version: 1:0.8.0-10
Severity: serious
Tags: ftbfs
Justification: fails to build from source (but built successfully in the past)
X-Debbugs-Cc: sramac...@debian.org
https://buildd.debian.org/status/fetch.php?pkg=fenics-dolfinx&arch=armel&ver=1%3A0.8.0-10%2Bb1&stamp=1720783021&raw=0
/<<PKGBUILDDIR>>/debian/tmp-real/usr/include/dolfinx/refinement/plaza.h:536:60:
note: parameter passing for argument of type ‘std::span<const double,
4294967295>’ changed in GCC 7.1
[100%] Linking CXX shared module cpp.cpython-312-arm-linux-gnueabi.so
/usr/bin/cmake -E cmake_link_script CMakeFiles/cpp.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -isystem /<<PKGBUILDDIR>>/debian/tmp-real/usr/include
-O3 -DNDEBUG -Wl,-s -Wl,--gc-sections -Wl,-z,relro -shared -o
cpp.cpython-312-arm-linux-gnueabi.so
CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o
CMakeFiles/cpp.dir/dolfinx/wrappers/assemble.cpp.o
CMakeFiles/cpp.dir/dolfinx/wrappers/common.cpp.o
CMakeFiles/cpp.dir/dolfinx/wrappers/fem.cpp.o
CMakeFiles/cpp.dir/dolfinx/wrappers/geometry.cpp.o
CMakeFiles/cpp.dir/dolfinx/wrappers/graph.cpp.o
CMakeFiles/cpp.dir/dolfinx/wrappers/io.cpp.o
CMakeFiles/cpp.dir/dolfinx/wrappers/la.cpp.o
CMakeFiles/cpp.dir/dolfinx/wrappers/log.cpp.o
CMakeFiles/cpp.dir/dolfinx/wrappers/mesh.cpp.o
CMakeFiles/cpp.dir/dolfinx/wrappers/petsc.cpp.o
CMakeFiles/cpp.dir/dolfinx/wrappers/refinement.cpp.o
-Wl,-rpath,/<<PKGBUILDDIR>>/debian/tmp-real/usr/lib/arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/mpich/lib:/usr/lib/arm-linux-gnueabi/hdf5/mpich:/usr/lib/slepcdir/slepc3.20/arm-linux-gnueabi-real/lib:/usr/lib/petscdir/petsc3.20/arm-linux-gnueabi-real/lib:
libnanobind-static.a
/<<PKGBUILDDIR>>/debian/tmp-real/usr/lib/arm-linux-gnueabi/libdolfinx_real.so.0.8.0
/usr/lib/arm-linux-gnueabi/libpugixml.so.1.14
/usr/lib/arm-linux-gnueabi/libbasix.so.0.8.0
/usr/lib/arm-linux-gnueabi/libboost_timer.so.1.83.0
/usr/lib/arm-linux-gnueabi/mpich/lib/libmpichcxx.so
/usr/lib/arm-linux-gnueabi/mpich/lib/libmpich.so
/usr/lib/arm-linux-gnueabi/hdf5/mpich/libhdf5.so
/usr/lib/slepcdir/slepc3.20/arm-linux-gnueabi-real/lib/libslepc_real.so
/usr/lib/petscdir/petsc3.20/arm-linux-gnueabi-real/lib/libpetsc_real.so
gmake[4]: Leaving directory '/tmp/tmpau7h4lpa/build'
[100%] Built target cpp
gmake[3]: Leaving directory '/tmp/tmpau7h4lpa/build'
/usr/bin/cmake -E cmake_progress_start /tmp/tmpau7h4lpa/build/CMakeFiles 0
gmake[2]: Leaving directory '/tmp/tmpau7h4lpa/build'
*** Installing project into wheel...
-- Install configuration: "Release"
-- Installing:
/tmp/tmpau7h4lpa/wheel/platlib/dolfinx/cpp.cpython-312-arm-linux-gnueabi.so
-- Set non-toolchain portion of runtime path of
"/tmp/tmpau7h4lpa/wheel/platlib/dolfinx/cpp.cpython-312-arm-linux-gnueabi.so"
to
"/<<PKGBUILDDIR>>/debian/tmp-real/usr/lib/arm-linux-gnueabi:/usr/lib/arm-linux-gnueabi/mpich/lib:/usr/lib/arm-linux-gnueabi/hdf5/mpich:/usr/lib/slepcdir/slepc3.20/arm-linux-gnueabi-real/lib:/usr/lib/petscdir/petsc3.20/arm-linux-gnueabi-real/lib"
*** Making wheel...
*** Created fenics_dolfinx-0.8.0-cp312-cp312-linux_arm.whl...
Successfully built fenics_dolfinx-0.8.0-cp312-cp312-linux_arm.whl
I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with
"installer" module
I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir
I: pybuild base:311: cd
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_dolfinx-real/build; python3.12 -m
pytest --durations=20 -k "not ( test_cube_distance )"
E: pybuild pybuild:435: plugin pyproject failed: exit code=1: cd
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_dolfinx-real/build; python3.12 -m
pytest --durations=20 -k "not ( test_cube_distance )"
make[1]: *** [debian/rules:192: debian/tmp-real] Error 14
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:161: binary-arch] Error 2
Cheers
--
Sebastian Ramacher
--- End Message ---
--- Begin Message ---
32-bit arches are compiling now. I guess this bug just caught the
middle of the mpi-defaults transition.
Drew
--- End Message ---
