Your message dated Mon, 29 Apr 2024 17:50:32 +0000
with message-id <e1s1v96-005q3p...@fasolo.debian.org>
and subject line Bug#1070055: fixed in toil 6.1.0-4
has caused the Debian Bug report #1070055,
regarding toil: FTBFS: ModuleNotFoundError: No module named 'pytz'
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
1070055: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1070055
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:toil
Version: 6.1.0-3
Severity: serious
Tags: ftbfs
Dear maintainer:
During a rebuild of all packages in unstable, your package failed to build:
--------------------------------------------------------------------------------
[...]
debian/rules binary
dh binary --buildsystem=pybuild
dh_update_autotools_config -O--buildsystem=pybuild
dh_autoreconf -O--buildsystem=pybuild
dh_auto_configure -O--buildsystem=pybuild
I: pybuild base:311: python3.12 setup.py config
running config
I: pybuild base:311: python3.11 setup.py config
running config
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_build
I: pybuild base:311: /usr/bin/python3.12 setup.py build
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil
copying src/toil/exceptions.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil
copying src/toil/deferred.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil
copying src/toil/serviceManager.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil
copying src/toil/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil
copying src/toil/realtimeLogger.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil
copying src/toil/leader.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil
copying src/toil/toilState.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil
copying src/toil/bus.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil
copying src/toil/job.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil
copying src/toil/worker.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil
copying src/toil/resource.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil
copying src/toil/version.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil
copying src/toil/statsAndLogging.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil
copying src/toil/common.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/jobStores
copying src/toil/jobStores/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/jobStores
copying src/toil/jobStores/utils.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/jobStores
copying src/toil/jobStores/fileJobStore.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/jobStores
copying src/toil/jobStores/conftest.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/jobStores
copying src/toil/jobStores/abstractJobStore.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/jobStores
copying src/toil/jobStores/googleJobStore.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/jobStores
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/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/lib
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/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/lib
copying src/toil/lib/resources.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/lib
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copying src/toil/lib/threading.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/lib
copying src/toil/lib/objects.py ->
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copying src/toil/lib/throttle.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/lib
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copying src/toil/lib/bioio.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/lib
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copying src/toil/lib/ec2.py ->
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copying src/toil/lib/conversions.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/lib
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/cwl
copying src/toil/cwl/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/cwl
copying src/toil/cwl/utils.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/cwl
copying src/toil/cwl/cwltoil.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/cwl
copying src/toil/cwl/conftest.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/cwl
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems
copying src/toil/batchSystems/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems
copying src/toil/batchSystems/abstractGridEngineBatchSystem.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems
copying src/toil/batchSystems/singleMachine.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems
copying src/toil/batchSystems/lsf.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems
copying src/toil/batchSystems/cleanup_support.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems
copying src/toil/batchSystems/awsBatch.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems
copying src/toil/batchSystems/gridengine.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems
copying src/toil/batchSystems/contained_executor.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems
copying src/toil/batchSystems/registry.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems
copying src/toil/batchSystems/lsfHelper.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems
copying src/toil/batchSystems/local_support.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems
copying src/toil/batchSystems/htcondor.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems
copying src/toil/batchSystems/kubernetes.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems
copying src/toil/batchSystems/torque.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems
copying src/toil/batchSystems/options.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems
copying src/toil/batchSystems/slurm.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems
copying src/toil/batchSystems/abstractBatchSystem.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/provisioners
copying src/toil/provisioners/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/provisioners
copying src/toil/provisioners/abstractProvisioner.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/provisioners
copying src/toil/provisioners/gceProvisioner.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/provisioners
copying src/toil/provisioners/node.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/provisioners
copying src/toil/provisioners/clusterScaler.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/provisioners
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/fileStores
copying src/toil/fileStores/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/fileStores
copying src/toil/fileStores/cachingFileStore.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/fileStores
copying src/toil/fileStores/abstractFileStore.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/fileStores
copying src/toil/fileStores/nonCachingFileStore.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/fileStores
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/test
copying src/toil/test/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/test
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copying src/toil/wdl/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/wdl
copying src/toil/wdl/wdltoil.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/wdl
copying src/toil/wdl/utils.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/wdl
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/options
copying src/toil/options/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/options
copying src/toil/options/wdl.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/options
copying src/toil/options/common.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/options
copying src/toil/options/cwl.py ->
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copying src/toil/utils/__init__.py ->
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copying src/toil/utils/toilDebugFile.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/utils
copying src/toil/utils/toilStats.py ->
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copying src/toil/utils/toilDestroyCluster.py ->
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copying src/toil/utils/toilKill.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/utils
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/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/utils
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/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/utils
copying src/toil/utils/toilSshCluster.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/utils
copying src/toil/utils/toilLaunchCluster.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/utils
copying src/toil/utils/toilStatus.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/utils
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copying src/toil/server/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/server
copying src/toil/server/celery_app.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/server
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/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/server
copying src/toil/server/app.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/server
copying src/toil/server/wsgi_app.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/server
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/jobStores/aws
copying src/toil/jobStores/aws/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/jobStores/aws
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/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/jobStores/aws
copying src/toil/jobStores/aws/jobStore.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/jobStores/aws
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/lib/aws
copying src/toil/lib/aws/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/lib/aws
copying src/toil/lib/aws/session.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/lib/aws
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/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/lib/aws
copying src/toil/lib/aws/ami.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/lib/aws
copying src/toil/lib/aws/iam.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/lib/aws
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/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/lib/encryption
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/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/lib/encryption
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/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/lib/encryption
copying src/toil/lib/encryption/_nacl.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/lib/encryption
creating
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems/mesos
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/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems/mesos
copying src/toil/batchSystems/mesos/executor.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems/mesos
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/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems/mesos
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/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_toil/build/toil/batchSystems/mesos/test
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/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/src
copying src/toil/test/src/jobFileStoreTest.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/src
copying src/toil/test/src/regularLogTest.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/src
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/wdl
copying src/toil/test/wdl/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/wdl
copying src/toil/test/wdl/wdltoil_test.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/wdl
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/options
copying src/toil/test/options/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/options
copying src/toil/test/options/options.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/options
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/utils
copying src/toil/test/utils/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/utils
copying src/toil/test/utils/toilKillTest.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/utils
copying src/toil/test/utils/toilDebugTest.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/utils
copying src/toil/test/utils/utilsTest.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/utils
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/server
copying src/toil/test/server/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/server
copying src/toil/test/server/serverTest.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/server
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/lib/aws
copying src/toil/test/lib/aws/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/lib/aws
copying src/toil/test/lib/aws/test_iam.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/lib/aws
copying src/toil/test/lib/aws/test_utils.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/lib/aws
copying src/toil/test/lib/aws/test_s3.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/lib/aws
creating
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/provisioners/aws
copying src/toil/test/provisioners/aws/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/provisioners/aws
copying src/toil/test/provisioners/aws/awsProvisionerTest.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/provisioners/aws
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/server/wes
copying src/toil/server/wes/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/server/wes
copying src/toil/server/wes/tasks.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/server/wes
copying src/toil/server/wes/abstract_backend.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/server/wes
copying src/toil/server/wes/toil_backend.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/server/wes
copying src/toil/server/wes/amazon_wes_utils.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/server/wes
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/server/cli
copying src/toil/server/cli/__init__.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/server/cli
copying src/toil/server/cli/wes_cwl_runner.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/server/cli
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/server/api_spec
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/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/server/api_spec
copying src/toil/test/cwl/colon_test_output_job.yaml ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
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/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
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/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/revsort2.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/stream.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/download_directory.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/preemptible_expression.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/download_subdirectory.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/directory_from_directory.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/echo_string_scatter_capture_stdout.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/echo-stdout-log-dir.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/echo-stderr.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/load_contents.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/alwaysfails.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/test_filename_conflict_detection_at_root.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/preemptible.cwl ->
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copying src/toil/test/cwl/test_filename_conflict_detection.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/file_from_directory.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/colon_test_output.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/seqtk_seq.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/glob_dir.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/revtool2.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/s3_secondary_file.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/echo.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/download.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/echo_string.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/conditional_wf.cwl ->
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copying src/toil/test/cwl/sorttool.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/test_filename_conflict_resolution.cwl ->
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copying src/toil/test/cwl/revtool.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/revsort.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/test/cwl/nvidia_smi.cwl ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/test/cwl
copying src/toil/server/api_spec/workflow_execution_service.swagger.yaml ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_toil/build/toil/server/api_spec
PYTHONPATH=/<<PKGBUILDDIR>>/src /usr/bin/make -C docs man SPHINXOPTS=""
make[2]: Entering directory '/<<PKGBUILDDIR>>/docs'
Running Sphinx v7.2.6
Configuration error:
There is a programmable error in your configuration file:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/config.py", line 358, in
eval_config_file
exec(code, namespace) # NoQA: S102
^^^^^^^^^^^^^^^^^^^^^
File "/<<PKGBUILDDIR>>/docs/conf.py", line 17, in <module>
import toil.version
File "/<<PKGBUILDDIR>>/src/toil/__init__.py", line 25, in <module>
from pytz import timezone
ModuleNotFoundError: No module named 'pytz'
make[2]: *** [Makefile:20: man] Error 2
make[2]: Leaving directory '/<<PKGBUILDDIR>>/docs'
make[1]: *** [debian/rules:15: override_dh_auto_build] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:11: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:
https://people.debian.org/~sanvila/build-logs/202404/
About the archive rebuild: The build was made on virtual machines
of type m6a.large from AWS, using sbuild and a reduced chroot
with only build-essential packages.
If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.
Thanks.
--- End Message ---
--- Begin Message ---
Source: toil
Source-Version: 6.1.0-4
Done: Michael R. Crusoe <cru...@debian.org>
We believe that the bug you reported is fixed in the latest version of
toil, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1070...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Michael R. Crusoe <cru...@debian.org> (supplier of updated toil package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Mon, 29 Apr 2024 16:41:47 +0200
Source: toil
Architecture: source
Version: 6.1.0-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Michael R. Crusoe <cru...@debian.org>
Closes: 1070055
Changes:
toil (6.1.0-4) unstable; urgency=medium
.
* d/control: we now need an explicit dependency on python3-tz. Closes:
#1070055
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