Source: libbpp-phyl-omics
Version: 2.4.1-5
Severity: serious
Tags: patch pending
Justification: library ABI skew on upgrade
User: debian-...@lists.debian.org
Usertags: time-t
Dear maintainer,
As part of the 64-bit time_t transition required to support 32-bit
architectures in 2038 and beyond
(https://wiki.debian.org/ReleaseGoals/64bit-time), we have identified
libbpp-phyl-omics as a source package shipping runtime libraries whose ABI
either is affected by the change in size of time_t, or could not be
analyzed via abi-compliance-checker (and therefore to be on the safe
side we assume is affected).
To ensure that inconsistent combinations of libraries with their
reverse-dependencies are never installed together, it is necessary to
have a library transition, which is most easily done by renaming the
runtime library package.
Since turning on 64-bit time_t is being handled centrally through a change
to the default dpkg-buildflags (https://bugs.debian.org/1037136), it is
important that libraries affected by this ABI change all be uploaded close
together in time. Therefore I have prepared a 0-day NMU for libbpp-phyl-omics
which will initially be uploaded to experimental if possible, then to
unstable after packages have cleared binary NEW.
Please find the patch for this NMU attached.
If you have any concerns about this patch, please reach out ASAP. Although
this package will be uploaded to experimental immediately, there will be a
period of several days before we begin uploads to unstable; so if information
becomes available that your package should not be included in the transition,
there is time for us to amend the planned uploads.
-- System Information:
Debian Release: trixie/sid
APT prefers unstable
APT policy: (500, 'unstable'), (500, 'testing'), (1, 'experimental')
Architecture: amd64 (x86_64)
Kernel: Linux 6.5.0-14-generic (SMP w/12 CPU threads; PREEMPT)
Kernel taint flags: TAINT_PROPRIETARY_MODULE, TAINT_OOT_MODULE
Locale: LANG=C, LC_CTYPE=C.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
diff -Nru libbpp-phyl-omics-2.4.1/debian/changelog
libbpp-phyl-omics-2.4.1/debian/changelog
--- libbpp-phyl-omics-2.4.1/debian/changelog 2023-08-13 11:11:55.000000000
+0000
+++ libbpp-phyl-omics-2.4.1/debian/changelog 2024-01-31 19:54:16.000000000
+0000
@@ -1,3 +1,10 @@
+libbpp-phyl-omics (2.4.1-5.1) experimental; urgency=medium
+
+ * Non-maintainer upload.
+ * Rename libraries for 64-bit time_t transition.
+
+ -- Steve Langasek <vor...@debian.org> Wed, 31 Jan 2024 19:54:16 +0000
+
libbpp-phyl-omics (2.4.1-5) unstable; urgency=medium
* Team upload.
diff -Nru libbpp-phyl-omics-2.4.1/debian/control
libbpp-phyl-omics-2.4.1/debian/control
--- libbpp-phyl-omics-2.4.1/debian/control 2023-08-13 11:11:41.000000000
+0000
+++ libbpp-phyl-omics-2.4.1/debian/control 2024-01-31 19:54:16.000000000
+0000
@@ -18,7 +18,7 @@
Package: libbpp-phyl-omics-dev
Architecture: any
Section: libdevel
-Depends: libbpp-phyl-omics3 (= ${binary:Version}),
+Depends: libbpp-phyl-omics3t64 (= ${binary:Version}),
${misc:Depends},
${devlibs:Depends}
Multi-Arch: same
@@ -32,7 +32,10 @@
This package contains the static library and the header files of the
Bio++ classes dedicated to genomic phylogeny.
-Package: libbpp-phyl-omics3
+Package: libbpp-phyl-omics3t64
+Provides: ${t64:Provides}
+Replaces: libbpp-phyl-omics3
+Breaks: libbpp-phyl-omics3 (<< ${source:Version})
Architecture: any
Multi-Arch: same
Section: libs
diff -Nru libbpp-phyl-omics-2.4.1/debian/libbpp-phyl-omics3.symbols
libbpp-phyl-omics-2.4.1/debian/libbpp-phyl-omics3.symbols
--- libbpp-phyl-omics-2.4.1/debian/libbpp-phyl-omics3.symbols 2023-08-13
11:11:55.000000000 +0000
+++ libbpp-phyl-omics-2.4.1/debian/libbpp-phyl-omics3.symbols 1970-01-01
00:00:00.000000000 +0000
@@ -1,543 +0,0 @@
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2.4.1
- _ZNK3bpp12TreeTemplateINS_4NodeEE17getNumberOfLeavesEv@Base 2.4.1
-
_ZNK3bpp12TreeTemplateINS_4NodeEE17hasBranchPropertyEiRKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
- _ZNK3bpp12TreeTemplateINS_4NodeEE19getDistanceToFatherEi@Base 2.4.1
- _ZNK3bpp12TreeTemplateINS_4NodeEE19hasDistanceToFatherEi@Base 2.4.1
- _ZNK3bpp12TreeTemplateINS_4NodeEE20getNodePropertyNamesB5cxx11Ei@Base 2.4.1
- _ZNK3bpp12TreeTemplateINS_4NodeEE22getBranchPropertyNamesB5cxx11Ei@Base 2.4.1
- _ZNK3bpp12TreeTemplateINS_4NodeEE5cloneEv@Base 2.4.1
- _ZNK3bpp12TreeTemplateINS_4NodeEE6isLeafEi@Base 2.4.1
- _ZNK3bpp12TreeTemplateINS_4NodeEE6isRootEi@Base 2.4.1
- _ZNK3bpp12TreeTemplateINS_4NodeEE7getNameB5cxx11Ev@Base 2.4.1
-
_ZNK3bpp12TreeTemplateINS_4NodeEE7getNodeERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
- _ZNK3bpp12TreeTemplateINS_4NodeEE7getNodeEib@Base 2.4.1
- _ZNK3bpp12TreeTemplateINS_4NodeEE7hasNodeEi@Base 2.4.1
- _ZNK3bpp12TreeTemplateINS_4NodeEE8getNodesEv@Base 2.4.1
- _ZNK3bpp12TreeTemplateINS_4NodeEE8isRootedEv@Base 2.4.1
-
_ZNK3bpp12TreeTemplateINS_4NodeEE9getLeafIdERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
- _ZNK3bpp12TreeTemplateINS_4NodeEE9getLeavesEv@Base 2.4.1
- _ZNK3bpp12TreeTemplateINS_4NodeEE9getRootIdEv@Base 2.4.1
- _ZNK3bpp12TreeTemplateINS_4NodeEE9getSonsIdEi@Base 2.4.1
- _ZNK3bpp12TreeTemplateINS_4NodeEE9hasFatherEi@Base 2.4.1
- _ZNK3bpp13MetaOptimizer5cloneEv@Base 2.4.1
- _ZNK3bpp13NodeException9getNodeIdEv@Base 2.4.1
- _ZNK3bpp13TreeException7getTreeEv@Base 2.4.1
- _ZNK3bpp14DistanceMatrix5cloneEv@Base 2.4.1
- _ZNK3bpp14DistanceMatrix8asMatrixEv@Base 2.4.1
-
_ZNK3bpp14DistanceMatrixclERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_@Base
2.4.1
- _ZNK3bpp14DistanceMatrixclEmm@Base 2.4.1
- _ZNK3bpp14NodePException7getNodeEv@Base 2.4.1
- _ZNK3bpp14NodePException9getNodeIdEv@Base 2.4.1
- _ZNK3bpp18BppUnsignedInteger5cloneEv@Base 2.4.1
- _ZNK3bpp18DistanceEstimation5cloneEv@Base 2.4.1
- _ZNK3bpp19AbstractMafIterator9isVerboseEv@Base 2.4.1
-
_ZNK3bpp19MafStatisticsResult8getValueERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
-
_ZNK3bpp19MafStatisticsResult8hasValueERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
- _ZNK3bpp21AbstractMafStatistics9getResultEv@Base 2.4.1
- _ZNK3bpp21NodeNotFoundException5getIdB5cxx11Ev@Base 2.4.1
- _ZNK3bpp21OutputTreeMafIterator11stripNames_ERNS_4NodeE@Base 2.4.1
- _ZNK3bpp21OutputTreeMafIterator11writeBlock_ERSoRKNS_8MafBlockE@Base 2.4.1
- _ZNK3bpp25PropertyNotFoundException15getPropertyNameB5cxx11Ev@Base 2.4.1
-
_ZNK3bpp25SimpleMafStatisticsResult8getValueERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
- _ZNK3bpp25SimpleMafStatisticsResult8getValueEv@Base 2.4.1
- _ZNK3bpp26AbstractParameterAliasable24getIndependentParametersEv@Base 2.4.1
- _ZNK3bpp26CountClustersMafStatistics11getFullNameB5cxx11Ev@Base 2.4.1
- _ZNK3bpp26CountClustersMafStatistics12getShortNameB5cxx11Ev@Base 2.4.1
- _ZNK3bpp27AbstractMafStatisticsSimple16getSupportedTagsB5cxx11Ev@Base 2.4.1
- _ZNK3bpp27AbstractMafStatisticsSimple9getResultEv@Base 2.4.1
-
_ZNK3bpp31OutputDistanceMatrixMafIterator11stripNames_ERSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS7_EE@Base
2.4.1
-
_ZNK3bpp31OutputDistanceMatrixMafIterator11writeBlock_ERSoRKNS_8MafBlockE@Base
2.4.1
- _ZNK3bpp34CountDistanceEstimationMafIterator15getPropertyNameB5cxx11Ev@Base
2.4.1
- _ZNK3bpp38MaximumLikelihoodModelFitMafStatistics11getFullNameB5cxx11Ev@Base
2.4.1
- _ZNK3bpp38MaximumLikelihoodModelFitMafStatistics12getShortNameB5cxx11Ev@Base
2.4.1
-
_ZNK3bpp38MaximumLikelihoodModelFitMafStatistics16getSupportedTagsB5cxx11Ev@Base
2.4.1
-
_ZNK3bpp46MaximumLikelihoodDistanceEstimationMafIterator15getPropertyNameB5cxx11Ev@Base
2.4.1
-
_ZNK3bpp47DistanceBasedPhylogenyReconstructionMafIterator15getPropertyNameB5cxx11Ev@Base
2.4.1
- _ZNK3bpp4Node11getFatherIdEv@Base 2.4.1
-
_ZNK3bpp4Node15getNodePropertyERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
- _ZNK3bpp4Node15getNumberOfSonsEv@Base 2.4.1
-
_ZNK3bpp4Node15hasNodePropertyERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
-
_ZNK3bpp4Node17getBranchPropertyERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
-
_ZNK3bpp4Node17hasBranchPropertyERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
- _ZNK3bpp4Node19hasDistanceToFatherEv@Base 2.4.1
- _ZNK3bpp4Node20getNodePropertyNamesB5cxx11Ev@Base 2.4.1
- _ZNK3bpp4Node22getBranchPropertyNamesB5cxx11Ev@Base 2.4.1
- _ZNK3bpp4Node5getIdEv@Base 2.4.1
- _ZNK3bpp4Node7hasNameEv@Base 2.4.1
- _ZNK3bpp4Node9getFatherEv@Base 2.4.1
- _ZNK3bpp4Node9getSonsIdEv@Base 2.4.1
- _ZNK3bpp4Node9hasFatherEv@Base 2.4.1
- _ZNK3bpp6NumberIdE5cloneEv@Base 2.4.1
- _ZNK3bpp6NumberIdE8toStringB5cxx11Ev@Base 2.4.1
- _ZNK3bpp6NumberIiE5cloneEv@Base 2.4.1
- _ZNK3bpp6NumberIiE8toStringB5cxx11Ev@Base 2.4.1
- _ZNK3bpp6NumberIjE5cloneEv@Base 2.4.1
- _ZNK3bpp6NumberIjE8toStringB5cxx11Ev@Base 2.4.1
-
_ZNK3bpp8MafBlock11getPropertyERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
- _ZNK3bpp9BppDouble5cloneEv@Base 2.4.1
- _ZNK3bpp9RowMatrixIdE15getNumberOfRowsEv@Base 2.4.1
- _ZNK3bpp9RowMatrixIdE18getNumberOfColumnsEv@Base 2.4.1
- _ZNK3bpp9RowMatrixIdE3colEm@Base 2.4.1
- _ZNK3bpp9RowMatrixIdE3rowEm@Base 2.4.1
- _ZNK3bpp9RowMatrixIdE5cloneEv@Base 2.4.1
- _ZNK3bpp9RowMatrixIdEclEmm@Base 2.4.1
- _ZNKSt5ctypeIcE8do_widenEc@Base 2.4.1
-
_ZNKSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8ClonableEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE4findERS7_@Base
2.4.1
-
_ZNSt12_Vector_baseINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED1Ev@Base
2.4.1
-
_ZNSt12_Vector_baseINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED2Ev@Base
2.4.1
- _ZNSt12_Vector_baseIPKN3bpp4NodeESaIS3_EED1Ev@Base 2.4.1
- _ZNSt12_Vector_baseIPKN3bpp4NodeESaIS3_EED2Ev@Base 2.4.1
- _ZNSt12_Vector_baseIPN3bpp4NodeESaIS2_EED1Ev@Base 2.4.1
- _ZNSt12_Vector_baseIPN3bpp4NodeESaIS2_EED2Ev@Base 2.4.1
- _ZNSt12_Vector_baseISt6vectorIdSaIdEESaIS2_EED1Ev@Base 2.4.1
- _ZNSt12_Vector_baseISt6vectorIdSaIdEESaIS2_EED2Ev@Base 2.4.1
- _ZNSt12_Vector_baseIdSaIdEED1Ev@Base 2.4.1
- _ZNSt12_Vector_baseIdSaIdEED2Ev@Base 2.4.1
- _ZNSt12_Vector_baseIiSaIiEED1Ev@Base 2.4.1
- _ZNSt12_Vector_baseIiSaIiEED2Ev@Base 2.4.1
- _ZNSt15_Sp_counted_ptrIDnLN9__gnu_cxx12_Lock_policyE2EE10_M_disposeEv@Base
2.4.1
- _ZNSt16_Sp_counted_baseILN9__gnu_cxx12_Lock_policyE2EE10_M_destroyEv@Base
2.4.1
-
_ZNSt16_Sp_counted_baseILN9__gnu_cxx12_Lock_policyE2EE24_M_release_last_use_coldEv@Base
2.4.1
-
_ZNSt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEPN3bpp10BppNumberIESt4lessIS5_ESaISt4pairIKS5_S8_EEEixERSC_@Base
2.4.1
-
_ZNSt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEPN3bpp8ClonableESt4lessIS5_ESaISt4pairIKS5_S8_EEEixERSC_@Base
2.4.1
-
_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_@Base
2.4.1
-
_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED1Ev@Base
2.4.1
-
_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED2Ev@Base
2.4.1
-
_ZNSt6vectorIPKN3bpp4NodeESaIS3_EE17_M_realloc_insertIJS3_EEEvN9__gnu_cxx17__normal_iteratorIPS3_S5_EEDpOT_@Base
2.4.1
-
_ZNSt6vectorIPN3bpp17IterationListenerESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base
2.4.1
-
_ZNSt6vectorIPN3bpp4NodeESaIS2_EE17_M_realloc_insertIJS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base
2.4.1
- _ZNSt6vectorIS_IdSaIdEESaIS1_EE17_M_default_appendEm@Base 2.4.1
- _ZNSt6vectorIS_IdSaIdEESaIS1_EED1Ev@Base 2.4.1
- _ZNSt6vectorIS_IdSaIdEESaIS1_EED2Ev@Base 2.4.1
- _ZNSt6vectorIdSaIdEE17_M_default_appendEm@Base 2.4.1
-
_ZNSt6vectorIdSaIdEE17_M_realloc_insertIJRKdEEEvN9__gnu_cxx17__normal_iteratorIPdS1_EEDpOT_@Base
2.4.1
-
_ZNSt6vectorIiSaIiEE17_M_realloc_insertIJiEEEvN9__gnu_cxx17__normal_iteratorIPiS1_EEDpOT_@Base
2.4.1
- _ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEC1IS3_EEPKcRKS3_@Base
2.4.1
- _ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEC2IS3_EEPKcRKS3_@Base
2.4.1
-
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp10BppNumberIEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE24_M_get_insert_unique_posERS7_@Base
2.4.1
-
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp10BppNumberIEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorISB_ERS7_@Base
2.4.1
-
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp10BppNumberIEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE4findERS7_@Base
2.4.1
-
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8ClonableEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE24_M_get_insert_unique_posERS7_@Base
2.4.1
-
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8ClonableEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorISB_ERS7_@Base
2.4.1
-
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8ClonableEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE4findERS7_@Base
2.4.1
-
_ZNSt8_Rb_treeIPKN3bpp4NodeESt4pairIKS3_dESt10_Select1stIS6_ESt4lessIS3_ESaIS6_EE24_M_get_insert_unique_posERS5_@Base
2.4.1
-
_ZNSt8_Rb_treeIPKN3bpp4NodeESt4pairIKS3_dESt10_Select1stIS6_ESt4lessIS3_ESaIS6_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS6_ERS5_@Base
2.4.1
-
_ZSt16__do_uninit_copyIN9__gnu_cxx17__normal_iteratorIPKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorIS7_SaIS7_EEEEPS7_ET0_T_SG_SF_@Base
2.4.1
-
_ZSt16__do_uninit_copyIN9__gnu_cxx17__normal_iteratorIPKSt6vectorIdSaIdEES2_IS4_SaIS4_EEEEPS4_ET0_T_SC_SB_@Base
2.4.1
-
_ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorIS7_SaIS7_EEEEPS7_ET0_T_SG_SF_@Base
2.4.1
-
_ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEPKS5_OS8_@Base
2.4.1
-
_ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEPKS5_RKS8_@Base
2.4.1
- _ZTIN3bpp10BppIntegerE@Base 2.4.1
- _ZTIN3bpp10BppNumberIE@Base 2.4.1
- _ZTIN3bpp10SymbolListE@Base 2.4.1
- _ZTIN3bpp11MafSequenceE@Base 2.4.1
- _ZTIN3bpp12CoreSequenceE@Base 2.4.1
- _ZTIN3bpp12TreeTemplateINS_4NodeEEE@Base 2.4.1
- _ZTIN3bpp13MafStatisticsE@Base 2.4.1
- _ZTIN3bpp13NodeExceptionE@Base 2.4.1
- _ZTIN3bpp13TreeExceptionE@Base 2.4.1
- _ZTIN3bpp14DistanceMatrixE@Base 2.4.1
- _ZTIN3bpp14NodePExceptionE@Base 2.4.1
- _ZTIN3bpp16MafTrashIteratorE@Base 2.4.1
- _ZTIN3bpp18BppUnsignedIntegerE@Base 2.4.1
- _ZTIN3bpp18DimensionExceptionE@Base 2.4.1
- _ZTIN3bpp18DistanceEstimationE@Base 2.4.1
- _ZTIN3bpp19MafStatisticsResultE@Base 2.4.1
- _ZTIN3bpp21AbstractMafStatisticsE@Base 2.4.1
- _ZTIN3bpp21FilterTreeMafIteratorE@Base 2.4.1
- _ZTIN3bpp21NodeNotFoundExceptionE@Base 2.4.1
- _ZTIN3bpp21UnrootedTreeExceptionE@Base 2.4.1
- _ZTIN3bpp22DropSpeciesMafIteratorE@Base 2.4.1
- _ZTIN3bpp22NewOutgroupMafIteratorE@Base 2.4.1
- _ZTIN3bpp25AbstractFilterMafIteratorE@Base 2.4.1
- _ZTIN3bpp25IndexOutOfBoundsExceptionE@Base 2.4.1
- _ZTIN3bpp25PropertyNotFoundExceptionE@Base 2.4.1
- _ZTIN3bpp25SimpleMafStatisticsResultE@Base 2.4.1
- _ZTIN3bpp26CountClustersMafStatisticsE@Base 2.4.1
- _ZTIN3bpp27AbstractMafStatisticsSimpleE@Base 2.4.1
- _ZTIN3bpp27TreeManipulationMafIteratorE@Base 2.4.1
- _ZTIN3bpp34CountDistanceEstimationMafIteratorE@Base 2.4.1
- _ZTIN3bpp37AbstractDistanceEstimationMafIteratorE@Base 2.4.1
- _ZTIN3bpp38MaximumLikelihoodModelFitMafStatisticsE@Base 2.4.1
- _ZTIN3bpp42AbstractPhylogenyReconstructionMafIteratorE@Base 2.4.1
- _ZTIN3bpp46MaximumLikelihoodDistanceEstimationMafIteratorE@Base 2.4.1
- _ZTIN3bpp47DistanceBasedPhylogenyReconstructionMafIteratorE@Base 2.4.1
- _ZTIN3bpp4TreeE@Base 2.4.1
- _ZTIN3bpp6MatrixIdEE@Base 2.4.1
- _ZTIN3bpp6NumberIdEE@Base 2.4.1
- _ZTIN3bpp6NumberIiEE@Base 2.4.1
- _ZTIN3bpp6NumberIjEE@Base 2.4.1
- _ZTIN3bpp8ClonableE@Base 2.4.1
- _ZTIN3bpp8SequenceE@Base 2.4.1
- _ZTIN3bpp9BppDoubleE@Base 2.4.1
- _ZTIN3bpp9RowMatrixIdEE@Base 2.4.1
- _ZTSN3bpp10BppIntegerE@Base 2.4.1
- _ZTSN3bpp10BppNumberIE@Base 2.4.1
- _ZTSN3bpp10SymbolListE@Base 2.4.1
- _ZTSN3bpp11MafSequenceE@Base 2.4.1
- _ZTSN3bpp12CoreSequenceE@Base 2.4.1
- _ZTSN3bpp12TreeTemplateINS_4NodeEEE@Base 2.4.1
- _ZTSN3bpp13MafStatisticsE@Base 2.4.1
- _ZTSN3bpp13NodeExceptionE@Base 2.4.1
- _ZTSN3bpp13TreeExceptionE@Base 2.4.1
- _ZTSN3bpp14DistanceMatrixE@Base 2.4.1
- _ZTSN3bpp14NodePExceptionE@Base 2.4.1
- _ZTSN3bpp16MafTrashIteratorE@Base 2.4.1
- _ZTSN3bpp18BppUnsignedIntegerE@Base 2.4.1
- _ZTSN3bpp18DimensionExceptionE@Base 2.4.1
- _ZTSN3bpp18DistanceEstimationE@Base 2.4.1
- _ZTSN3bpp19MafStatisticsResultE@Base 2.4.1
- _ZTSN3bpp21AbstractMafStatisticsE@Base 2.4.1
- _ZTSN3bpp21FilterTreeMafIteratorE@Base 2.4.1
- _ZTSN3bpp21NodeNotFoundExceptionE@Base 2.4.1
- _ZTSN3bpp21UnrootedTreeExceptionE@Base 2.4.1
- _ZTSN3bpp22DropSpeciesMafIteratorE@Base 2.4.1
- _ZTSN3bpp22NewOutgroupMafIteratorE@Base 2.4.1
- _ZTSN3bpp25AbstractFilterMafIteratorE@Base 2.4.1
- _ZTSN3bpp25IndexOutOfBoundsExceptionE@Base 2.4.1
- _ZTSN3bpp25PropertyNotFoundExceptionE@Base 2.4.1
- _ZTSN3bpp25SimpleMafStatisticsResultE@Base 2.4.1
- _ZTSN3bpp26CountClustersMafStatisticsE@Base 2.4.1
- _ZTSN3bpp27AbstractMafStatisticsSimpleE@Base 2.4.1
- _ZTSN3bpp27TreeManipulationMafIteratorE@Base 2.4.1
- _ZTSN3bpp34CountDistanceEstimationMafIteratorE@Base 2.4.1
- _ZTSN3bpp37AbstractDistanceEstimationMafIteratorE@Base 2.4.1
- _ZTSN3bpp38MaximumLikelihoodModelFitMafStatisticsE@Base 2.4.1
- _ZTSN3bpp42AbstractPhylogenyReconstructionMafIteratorE@Base 2.4.1
- _ZTSN3bpp46MaximumLikelihoodDistanceEstimationMafIteratorE@Base 2.4.1
- _ZTSN3bpp47DistanceBasedPhylogenyReconstructionMafIteratorE@Base 2.4.1
- _ZTSN3bpp4TreeE@Base 2.4.1
- _ZTSN3bpp6MatrixIdEE@Base 2.4.1
- _ZTSN3bpp6NumberIdEE@Base 2.4.1
- _ZTSN3bpp6NumberIiEE@Base 2.4.1
- _ZTSN3bpp6NumberIjEE@Base 2.4.1
- _ZTSN3bpp8ClonableE@Base 2.4.1
- _ZTSN3bpp8SequenceE@Base 2.4.1
- _ZTSN3bpp9BppDoubleE@Base 2.4.1
- _ZTSN3bpp9RowMatrixIdEE@Base 2.4.1
- _ZTTN3bpp10BppIntegerE@Base 2.4.1
- _ZTTN3bpp12TreeTemplateINS_4NodeEEE@Base 2.4.1
- _ZTTN3bpp14DistanceMatrixE@Base 2.4.1
- _ZTTN3bpp18BppUnsignedIntegerE@Base 2.4.1
- _ZTTN3bpp18DistanceEstimationE@Base 2.4.1
- _ZTTN3bpp21FilterTreeMafIteratorE@Base 2.4.1
- _ZTTN3bpp22DropSpeciesMafIteratorE@Base 2.4.1
- _ZTTN3bpp22NewOutgroupMafIteratorE@Base 2.4.1
- _ZTTN3bpp25SimpleMafStatisticsResultE@Base 2.4.1
- _ZTTN3bpp27TreeManipulationMafIteratorE@Base 2.4.1
- _ZTTN3bpp34CountDistanceEstimationMafIteratorE@Base 2.4.1
- _ZTTN3bpp38MaximumLikelihoodModelFitMafStatisticsE@Base 2.4.1
- _ZTTN3bpp46MaximumLikelihoodDistanceEstimationMafIteratorE@Base 2.4.1
- _ZTTN3bpp47DistanceBasedPhylogenyReconstructionMafIteratorE@Base 2.4.1
- _ZTTN3bpp6NumberIdEE@Base 2.4.1
- _ZTTN3bpp6NumberIiEE@Base 2.4.1
- _ZTTN3bpp6NumberIjEE@Base 2.4.1
- _ZTTN3bpp9BppDoubleE@Base 2.4.1
- _ZTVN3bpp10BppIntegerE@Base 2.4.1
- _ZTVN3bpp12TreeTemplateINS_4NodeEEE@Base 2.4.1
- _ZTVN3bpp13NodeExceptionE@Base 2.4.1
- _ZTVN3bpp14DistanceMatrixE@Base 2.4.1
- _ZTVN3bpp18BppUnsignedIntegerE@Base 2.4.1
- _ZTVN3bpp18DimensionExceptionE@Base 2.4.1
- _ZTVN3bpp18DistanceEstimationE@Base 2.4.1
- _ZTVN3bpp19MafStatisticsResultE@Base 2.4.1
- _ZTVN3bpp21FilterTreeMafIteratorE@Base 2.4.1
- _ZTVN3bpp21NodeNotFoundExceptionE@Base 2.4.1
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diff -Nru
libbpp-phyl-omics-2.4.1/debian/libbpp-phyl-omics3t64.lintian-overrides
libbpp-phyl-omics-2.4.1/debian/libbpp-phyl-omics3t64.lintian-overrides
--- libbpp-phyl-omics-2.4.1/debian/libbpp-phyl-omics3t64.lintian-overrides
1970-01-01 00:00:00.000000000 +0000
+++ libbpp-phyl-omics-2.4.1/debian/libbpp-phyl-omics3t64.lintian-overrides
2024-01-31 19:54:16.000000000 +0000
@@ -0,0 +1 @@
+libbpp-phyl-omics3t64: package-name-doesnt-match-sonames libbpp-phyl-omics3
diff -Nru libbpp-phyl-omics-2.4.1/debian/libbpp-phyl-omics3t64.symbols
libbpp-phyl-omics-2.4.1/debian/libbpp-phyl-omics3t64.symbols
--- libbpp-phyl-omics-2.4.1/debian/libbpp-phyl-omics3t64.symbols
1970-01-01 00:00:00.000000000 +0000
+++ libbpp-phyl-omics-2.4.1/debian/libbpp-phyl-omics3t64.symbols
2024-01-31 19:54:16.000000000 +0000
@@ -0,0 +1,543 @@
+libbpp-phyl-omics.so.3 libbpp-phyl-omics3t64 #MINVER#
+* Build-Depends-Package: libbpp-phyl-omics-dev
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_ZN3bpp11MafSequence33splitNameIntoSpeciesAndChromosomeERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERS6_S9_@Base
2.4.1
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_ZN3bpp25PropertyNotFoundExceptionC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_PKNS_4NodeE@Base
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+
_ZN3bpp26CountClustersMafStatistics20getNumberOfClusters_EPKNS_4NodeERSt3mapIS3_dSt4lessIS3_ESaISt4pairIKS3_dEEE@Base
2.4.1
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+ _ZN3bpp26CountClustersMafStatisticsD2Ev@Base 2.4.1
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+
_ZN3bpp34CountDistanceEstimationMafIterator30estimateDistanceMatrixForBlockERKNS_8MafBlockE@Base
2.4.1
+ _ZN3bpp34CountDistanceEstimationMafIteratorD0Ev@Base 2.4.1
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2.4.1
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2.4.1
+ _ZN3bpp38MaximumLikelihoodModelFitMafStatistics5init_Ev@Base 2.4.1
+ _ZN3bpp38MaximumLikelihoodModelFitMafStatistics7computeERKNS_8MafBlockE@Base
2.4.1
+ _ZN3bpp38MaximumLikelihoodModelFitMafStatisticsD0Ev@Base 2.4.1
+ _ZN3bpp38MaximumLikelihoodModelFitMafStatisticsD1Ev@Base 2.4.1
+
_ZN3bpp42AbstractPhylogenyReconstructionMafIterator20analyseCurrentBlock_Ev@Base
2.4.1
+
_ZN3bpp46MaximumLikelihoodDistanceEstimationMafIterator30estimateDistanceMatrixForBlockERKNS_8MafBlockE@Base
2.4.1
+ _ZN3bpp46MaximumLikelihoodDistanceEstimationMafIteratorD0Ev@Base 2.4.1
+ _ZN3bpp46MaximumLikelihoodDistanceEstimationMafIteratorD1Ev@Base 2.4.1
+
_ZN3bpp47DistanceBasedPhylogenyReconstructionMafIterator17buildTreeForBlockERKNS_8MafBlockE@Base
2.4.1
+ _ZN3bpp47DistanceBasedPhylogenyReconstructionMafIteratorD0Ev@Base 2.4.1
+ _ZN3bpp47DistanceBasedPhylogenyReconstructionMafIteratorD1Ev@Base 2.4.1
+ _ZN3bpp4Node10deleteNameEv@Base 2.4.1
+ _ZN3bpp4Node10removeSonsEv@Base 2.4.1
+ _ZN3bpp4Node12removeFatherEv@Base 2.4.1
+
_ZN3bpp4Node15getNodePropertyERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
+
_ZN3bpp4Node17getBranchPropertyERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
+
_ZN3bpp4Node17setBranchPropertyERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_8ClonableE@Base
2.4.1
+ _ZN3bpp4Node19setDistanceToFatherEd@Base 2.4.1
+ _ZN3bpp4Node22deleteBranchPropertiesEv@Base 2.4.1
+ _ZN3bpp4Node22deleteDistanceToFatherEv@Base 2.4.1
+ _ZN3bpp4Node5setIdEi@Base 2.4.1
+
_ZN3bpp4Node7setNameERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
+ _ZN3bpp4Node9getFatherEv@Base 2.4.1
+ _ZN3bpp4Node9removeSonEm@Base 2.4.1
+ _ZN3bpp4NodeD0Ev@Base 2.4.1
+ _ZN3bpp4NodeD1Ev@Base 2.4.1
+ _ZN3bpp4NodeD2Ev@Base 2.4.1
+ _ZN3bpp6MatrixIdE6equalsERKS1_d@Base 2.4.1
+ _ZN3bpp6NumberIdED0Ev@Base 2.4.1
+ _ZN3bpp6NumberIdED1Ev@Base 2.4.1
+ _ZN3bpp6NumberIiED0Ev@Base 2.4.1
+ _ZN3bpp6NumberIiED1Ev@Base 2.4.1
+ _ZN3bpp6NumberIjED0Ev@Base 2.4.1
+ _ZN3bpp6NumberIjED1Ev@Base 2.4.1
+
_ZN3bpp8MafBlock14deletePropertyERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
+ _ZN3bpp9BppDoubleD0Ev@Base 2.4.1
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+ _ZN3bpp9ExceptionD1Ev@Base 2.4.1
+ _ZN3bpp9ExceptionD2Ev@Base 2.4.1
+ _ZN3bpp9RowMatrixIdE6resizeEmm@Base 2.4.1
+ _ZN3bpp9RowMatrixIdED0Ev@Base 2.4.1
+ _ZN3bpp9RowMatrixIdED1Ev@Base 2.4.1
+ _ZN3bpp9RowMatrixIdED2Ev@Base 2.4.1
+ _ZN3bpp9RowMatrixIdEclEmm@Base 2.4.1
+
_ZN3bpp9TextTools8toStringIdEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEET_@Base
2.4.1
+
_ZN3bpp9TextTools8toStringIiEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEET_@Base
2.4.1
+
_ZN3bpp9TextTools8toStringIjEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEET_@Base
2.4.1
+ _ZNK3bpp10BppInteger5cloneEv@Base 2.4.1
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+ _ZNK3bpp12TreeTemplateINS_4NodeEE11getFatherIdEi@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE11getLeavesIdEv@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE11getNodeNameB5cxx11Ei@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE11getRootNodeEv@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE11hasNodeNameEi@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE12cloneSubtreeEi@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE13getBranchesIdEv@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE13getInnerNodesEv@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE14getAncestorsIdEi@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE14getLeavesNamesB5cxx11Ev@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE15getInnerNodesIdEv@Base 2.4.1
+
_ZNK3bpp12TreeTemplateINS_4NodeEE15getNodePropertyEiRKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
+
_ZNK3bpp12TreeTemplateINS_4NodeEE15hasNodePropertyEiRKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE16getBranchLengthsEv@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE16getNumberOfNodesEv@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE16isMultifurcatingEv@Base 2.4.1
+
_ZNK3bpp12TreeTemplateINS_4NodeEE17getBranchPropertyEiRKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE17getNumberOfLeavesEv@Base 2.4.1
+
_ZNK3bpp12TreeTemplateINS_4NodeEE17hasBranchPropertyEiRKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE19getDistanceToFatherEi@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE19hasDistanceToFatherEi@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE20getNodePropertyNamesB5cxx11Ei@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE22getBranchPropertyNamesB5cxx11Ei@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE5cloneEv@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE6isLeafEi@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE6isRootEi@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE7getNameB5cxx11Ev@Base 2.4.1
+
_ZNK3bpp12TreeTemplateINS_4NodeEE7getNodeERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE7getNodeEib@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE7hasNodeEi@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE8getNodesEv@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE8isRootedEv@Base 2.4.1
+
_ZNK3bpp12TreeTemplateINS_4NodeEE9getLeafIdERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE9getLeavesEv@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE9getRootIdEv@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE9getSonsIdEi@Base 2.4.1
+ _ZNK3bpp12TreeTemplateINS_4NodeEE9hasFatherEi@Base 2.4.1
+ _ZNK3bpp13MetaOptimizer5cloneEv@Base 2.4.1
+ _ZNK3bpp13NodeException9getNodeIdEv@Base 2.4.1
+ _ZNK3bpp13TreeException7getTreeEv@Base 2.4.1
+ _ZNK3bpp14DistanceMatrix5cloneEv@Base 2.4.1
+ _ZNK3bpp14DistanceMatrix8asMatrixEv@Base 2.4.1
+
_ZNK3bpp14DistanceMatrixclERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_@Base
2.4.1
+ _ZNK3bpp14DistanceMatrixclEmm@Base 2.4.1
+ _ZNK3bpp14NodePException7getNodeEv@Base 2.4.1
+ _ZNK3bpp14NodePException9getNodeIdEv@Base 2.4.1
+ _ZNK3bpp18BppUnsignedInteger5cloneEv@Base 2.4.1
+ _ZNK3bpp18DistanceEstimation5cloneEv@Base 2.4.1
+ _ZNK3bpp19AbstractMafIterator9isVerboseEv@Base 2.4.1
+
_ZNK3bpp19MafStatisticsResult8getValueERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
+
_ZNK3bpp19MafStatisticsResult8hasValueERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
+ _ZNK3bpp21AbstractMafStatistics9getResultEv@Base 2.4.1
+ _ZNK3bpp21NodeNotFoundException5getIdB5cxx11Ev@Base 2.4.1
+ _ZNK3bpp21OutputTreeMafIterator11stripNames_ERNS_4NodeE@Base 2.4.1
+ _ZNK3bpp21OutputTreeMafIterator11writeBlock_ERSoRKNS_8MafBlockE@Base 2.4.1
+ _ZNK3bpp25PropertyNotFoundException15getPropertyNameB5cxx11Ev@Base 2.4.1
+
_ZNK3bpp25SimpleMafStatisticsResult8getValueERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
+ _ZNK3bpp25SimpleMafStatisticsResult8getValueEv@Base 2.4.1
+ _ZNK3bpp26AbstractParameterAliasable24getIndependentParametersEv@Base 2.4.1
+ _ZNK3bpp26CountClustersMafStatistics11getFullNameB5cxx11Ev@Base 2.4.1
+ _ZNK3bpp26CountClustersMafStatistics12getShortNameB5cxx11Ev@Base 2.4.1
+ _ZNK3bpp27AbstractMafStatisticsSimple16getSupportedTagsB5cxx11Ev@Base 2.4.1
+ _ZNK3bpp27AbstractMafStatisticsSimple9getResultEv@Base 2.4.1
+
_ZNK3bpp31OutputDistanceMatrixMafIterator11stripNames_ERSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS7_EE@Base
2.4.1
+
_ZNK3bpp31OutputDistanceMatrixMafIterator11writeBlock_ERSoRKNS_8MafBlockE@Base
2.4.1
+ _ZNK3bpp34CountDistanceEstimationMafIterator15getPropertyNameB5cxx11Ev@Base
2.4.1
+ _ZNK3bpp38MaximumLikelihoodModelFitMafStatistics11getFullNameB5cxx11Ev@Base
2.4.1
+ _ZNK3bpp38MaximumLikelihoodModelFitMafStatistics12getShortNameB5cxx11Ev@Base
2.4.1
+
_ZNK3bpp38MaximumLikelihoodModelFitMafStatistics16getSupportedTagsB5cxx11Ev@Base
2.4.1
+
_ZNK3bpp46MaximumLikelihoodDistanceEstimationMafIterator15getPropertyNameB5cxx11Ev@Base
2.4.1
+
_ZNK3bpp47DistanceBasedPhylogenyReconstructionMafIterator15getPropertyNameB5cxx11Ev@Base
2.4.1
+ _ZNK3bpp4Node11getFatherIdEv@Base 2.4.1
+
_ZNK3bpp4Node15getNodePropertyERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
+ _ZNK3bpp4Node15getNumberOfSonsEv@Base 2.4.1
+
_ZNK3bpp4Node15hasNodePropertyERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
+
_ZNK3bpp4Node17getBranchPropertyERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
+
_ZNK3bpp4Node17hasBranchPropertyERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
+ _ZNK3bpp4Node19hasDistanceToFatherEv@Base 2.4.1
+ _ZNK3bpp4Node20getNodePropertyNamesB5cxx11Ev@Base 2.4.1
+ _ZNK3bpp4Node22getBranchPropertyNamesB5cxx11Ev@Base 2.4.1
+ _ZNK3bpp4Node5getIdEv@Base 2.4.1
+ _ZNK3bpp4Node7hasNameEv@Base 2.4.1
+ _ZNK3bpp4Node9getFatherEv@Base 2.4.1
+ _ZNK3bpp4Node9getSonsIdEv@Base 2.4.1
+ _ZNK3bpp4Node9hasFatherEv@Base 2.4.1
+ _ZNK3bpp6NumberIdE5cloneEv@Base 2.4.1
+ _ZNK3bpp6NumberIdE8toStringB5cxx11Ev@Base 2.4.1
+ _ZNK3bpp6NumberIiE5cloneEv@Base 2.4.1
+ _ZNK3bpp6NumberIiE8toStringB5cxx11Ev@Base 2.4.1
+ _ZNK3bpp6NumberIjE5cloneEv@Base 2.4.1
+ _ZNK3bpp6NumberIjE8toStringB5cxx11Ev@Base 2.4.1
+
_ZNK3bpp8MafBlock11getPropertyERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
+ _ZNK3bpp9BppDouble5cloneEv@Base 2.4.1
+ _ZNK3bpp9RowMatrixIdE15getNumberOfRowsEv@Base 2.4.1
+ _ZNK3bpp9RowMatrixIdE18getNumberOfColumnsEv@Base 2.4.1
+ _ZNK3bpp9RowMatrixIdE3colEm@Base 2.4.1
+ _ZNK3bpp9RowMatrixIdE3rowEm@Base 2.4.1
+ _ZNK3bpp9RowMatrixIdE5cloneEv@Base 2.4.1
+ _ZNK3bpp9RowMatrixIdEclEmm@Base 2.4.1
+ _ZNKSt5ctypeIcE8do_widenEc@Base 2.4.1
+
_ZNKSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8ClonableEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE4findERS7_@Base
2.4.1
+
_ZNSt12_Vector_baseINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED1Ev@Base
2.4.1
+
_ZNSt12_Vector_baseINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED2Ev@Base
2.4.1
+ _ZNSt12_Vector_baseIPKN3bpp4NodeESaIS3_EED1Ev@Base 2.4.1
+ _ZNSt12_Vector_baseIPKN3bpp4NodeESaIS3_EED2Ev@Base 2.4.1
+ _ZNSt12_Vector_baseIPN3bpp4NodeESaIS2_EED1Ev@Base 2.4.1
+ _ZNSt12_Vector_baseIPN3bpp4NodeESaIS2_EED2Ev@Base 2.4.1
+ _ZNSt12_Vector_baseISt6vectorIdSaIdEESaIS2_EED1Ev@Base 2.4.1
+ _ZNSt12_Vector_baseISt6vectorIdSaIdEESaIS2_EED2Ev@Base 2.4.1
+ _ZNSt12_Vector_baseIdSaIdEED1Ev@Base 2.4.1
+ _ZNSt12_Vector_baseIdSaIdEED2Ev@Base 2.4.1
+ _ZNSt12_Vector_baseIiSaIiEED1Ev@Base 2.4.1
+ _ZNSt12_Vector_baseIiSaIiEED2Ev@Base 2.4.1
+ _ZNSt15_Sp_counted_ptrIDnLN9__gnu_cxx12_Lock_policyE2EE10_M_disposeEv@Base
2.4.1
+ _ZNSt16_Sp_counted_baseILN9__gnu_cxx12_Lock_policyE2EE10_M_destroyEv@Base
2.4.1
+
_ZNSt16_Sp_counted_baseILN9__gnu_cxx12_Lock_policyE2EE24_M_release_last_use_coldEv@Base
2.4.1
+
_ZNSt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEPN3bpp10BppNumberIESt4lessIS5_ESaISt4pairIKS5_S8_EEEixERSC_@Base
2.4.1
+
_ZNSt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEPN3bpp8ClonableESt4lessIS5_ESaISt4pairIKS5_S8_EEEixERSC_@Base
2.4.1
+
_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_@Base
2.4.1
+
_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED1Ev@Base
2.4.1
+
_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED2Ev@Base
2.4.1
+
_ZNSt6vectorIPKN3bpp4NodeESaIS3_EE17_M_realloc_insertIJS3_EEEvN9__gnu_cxx17__normal_iteratorIPS3_S5_EEDpOT_@Base
2.4.1
+
_ZNSt6vectorIPN3bpp17IterationListenerESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base
2.4.1
+
_ZNSt6vectorIPN3bpp4NodeESaIS2_EE17_M_realloc_insertIJS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base
2.4.1
+ _ZNSt6vectorIS_IdSaIdEESaIS1_EE17_M_default_appendEm@Base 2.4.1
+ _ZNSt6vectorIS_IdSaIdEESaIS1_EED1Ev@Base 2.4.1
+ _ZNSt6vectorIS_IdSaIdEESaIS1_EED2Ev@Base 2.4.1
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+
_ZNSt6vectorIdSaIdEE17_M_realloc_insertIJRKdEEEvN9__gnu_cxx17__normal_iteratorIPdS1_EEDpOT_@Base
2.4.1
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_ZNSt6vectorIiSaIiEE17_M_realloc_insertIJiEEEvN9__gnu_cxx17__normal_iteratorIPiS1_EEDpOT_@Base
2.4.1
+ _ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEC1IS3_EEPKcRKS3_@Base
2.4.1
+ _ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEC2IS3_EEPKcRKS3_@Base
2.4.1
+
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp10BppNumberIEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE24_M_get_insert_unique_posERS7_@Base
2.4.1
+
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp10BppNumberIEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorISB_ERS7_@Base
2.4.1
+
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp10BppNumberIEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE4findERS7_@Base
2.4.1
+
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8ClonableEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE24_M_get_insert_unique_posERS7_@Base
2.4.1
+
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8ClonableEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorISB_ERS7_@Base
2.4.1
+
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN3bpp8ClonableEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE4findERS7_@Base
2.4.1
+
_ZNSt8_Rb_treeIPKN3bpp4NodeESt4pairIKS3_dESt10_Select1stIS6_ESt4lessIS3_ESaIS6_EE24_M_get_insert_unique_posERS5_@Base
2.4.1
+
_ZNSt8_Rb_treeIPKN3bpp4NodeESt4pairIKS3_dESt10_Select1stIS6_ESt4lessIS3_ESaIS6_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS6_ERS5_@Base
2.4.1
+
_ZSt16__do_uninit_copyIN9__gnu_cxx17__normal_iteratorIPKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorIS7_SaIS7_EEEEPS7_ET0_T_SG_SF_@Base
2.4.1
+
_ZSt16__do_uninit_copyIN9__gnu_cxx17__normal_iteratorIPKSt6vectorIdSaIdEES2_IS4_SaIS4_EEEEPS4_ET0_T_SC_SB_@Base
2.4.1
+
_ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorIS7_SaIS7_EEEEPS7_ET0_T_SG_SF_@Base
2.4.1
+
_ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEPKS5_OS8_@Base
2.4.1
+
_ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEPKS5_RKS8_@Base
2.4.1
+ _ZTIN3bpp10BppIntegerE@Base 2.4.1
+ _ZTIN3bpp10BppNumberIE@Base 2.4.1
+ _ZTIN3bpp10SymbolListE@Base 2.4.1
+ _ZTIN3bpp11MafSequenceE@Base 2.4.1
+ _ZTIN3bpp12CoreSequenceE@Base 2.4.1
+ _ZTIN3bpp12TreeTemplateINS_4NodeEEE@Base 2.4.1
+ _ZTIN3bpp13MafStatisticsE@Base 2.4.1
+ _ZTIN3bpp13NodeExceptionE@Base 2.4.1
+ _ZTIN3bpp13TreeExceptionE@Base 2.4.1
+ _ZTIN3bpp14DistanceMatrixE@Base 2.4.1
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2.4.1
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2.4.1
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2.4.1
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+
_ZTv0_n32_NK3bpp25SimpleMafStatisticsResult8getValueERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base
2.4.1
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_ZTv0_n32_NK3bpp38MaximumLikelihoodModelFitMafStatistics12getShortNameB5cxx11Ev@Base
2.4.1
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_ZTv0_n40_N3bpp25SimpleMafStatisticsResult8setValueERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEd@Base
2.4.1
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+
_ZTv0_n40_NK3bpp38MaximumLikelihoodModelFitMafStatistics11getFullNameB5cxx11Ev@Base
2.4.1
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+
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2.4.1
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+
_ZTv0_n56_N3bpp19AbstractMafIterator20addIterationListenerEPNS_17IterationListenerE@Base
2.4.1
+
_ZTv0_n56_N3bpp25SimpleMafStatisticsResult8setValueERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEj@Base
2.4.1
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_ZTv0_n56_N3bpp38MaximumLikelihoodModelFitMafStatistics7computeERKNS_8MafBlockE@Base
2.4.1
+
_ZTv0_n64_NK3bpp38MaximumLikelihoodModelFitMafStatistics16getSupportedTagsB5cxx11Ev@Base
2.4.1
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