Your message dated Tue, 31 Oct 2023 08:26:10 +0000
with message-id <e1qxk4g-00dnxf...@fasolo.debian.org>
and subject line Bug#1054763: fixed in openmm 8.0.0+dfsg-3
has caused the Debian Bug report #1054763,
regarding openmm: FTBFS: make[1]: *** [debian/rules:38: override_dh_auto_test]
Error 2
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
1054763: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1054763
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: openmm
Version: 8.0.0+dfsg-2
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: lu...@debian.org
Usertags: ftbfs-20231027 ftbfs-trixie
Hi,
During a rebuild of all packages in sid, your package failed to build
on amd64.
Relevant part (hopefully):
> make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
> Running tests...
> /usr/bin/ctest --force-new-ctest-process --verbose -j8
> UpdateCTestConfiguration from
> :/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/DartConfiguration.tcl
> Parse Config file:/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/DartConfiguration.tcl
> UpdateCTestConfiguration from
> :/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/DartConfiguration.tcl
> Parse Config file:/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/DartConfiguration.tcl
> Test project /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu
> Constructing a list of tests
> Done constructing a list of tests
> Updating test list for fixtures
> Added 0 tests to meet fixture requirements
> Checking test dependency graph...
> Checking test dependency graph end
> test 1
> Start 1: TestReferenceAndersenThermostat
>
> 1: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceAndersenThermostat
> 1: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 1: Test timeout computed to be: 1500
> test 2
> Start 2: TestReferenceBrownianIntegrator
>
> 2: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceBrownianIntegrator
> 2: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 2: Test timeout computed to be: 1500
> test 3
> Start 3: TestReferenceCMAPTorsionForce
>
> 3: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceCMAPTorsionForce
> 3: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 3: Test timeout computed to be: 1500
> test 4
> Start 4: TestReferenceCMMotionRemover
>
> 4: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceCMMotionRemover
> 4: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 4: Test timeout computed to be: 1500
> test 5
> Start 5: TestReferenceCheckpoints
>
> 5: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceCheckpoints
> 5: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 5: Test timeout computed to be: 1500
> test 6
> Start 6: TestReferenceCompoundIntegrator
>
> 6: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceCompoundIntegrator
> 6: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 6: Test timeout computed to be: 1500
> test 7
> Start 7: TestReferenceCustomAngleForce
>
> 7: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceCustomAngleForce
> 7: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 7: Test timeout computed to be: 1500
> test 8
> Start 8: TestReferenceCustomBondForce
>
> 8: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceCustomBondForce
> 8: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 8: Test timeout computed to be: 1500
> 7: Done
> 4: Done
> 1/116 Test #4: TestReferenceCMMotionRemover .................. Passed
> 0.01 sec
> test 9
> Start 9: TestReferenceCustomCVForce
>
> 9: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceCustomCVForce
> 9: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 9: Test timeout computed to be: 1500
> 2/116 Test #7: TestReferenceCustomAngleForce ................. Passed
> 0.01 sec
> test 10
> Start 10: TestReferenceCustomCentroidBondForce
>
> 10: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceCustomCentroidBondForce
> 10: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 10: Test timeout computed to be: 1500
> 8: Done
> 3/116 Test #8: TestReferenceCustomBondForce .................. Passed
> 0.01 sec
> test 11
> Start 11: TestReferenceCustomCompoundBondForce
>
> 11: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceCustomCompoundBondForce
> 11: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 11: Test timeout computed to be: 1500
> 9: Done
> 4/116 Test #9: TestReferenceCustomCVForce .................... Passed
> 0.01 sec
> test 12
> Start 12: TestReferenceCustomExternalForce
>
> 12: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceCustomExternalForce
> 12: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 12: Test timeout computed to be: 1500
> 3: Done
> 12: Done
> 5/116 Test #3: TestReferenceCMAPTorsionForce ................. Passed
> 0.03 sec
> test 13
> Start 13: TestReferenceCustomGBForce
>
> 13: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceCustomGBForce
> 13: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 13: Test timeout computed to be: 1500
> 6/116 Test #12: TestReferenceCustomExternalForce .............. Passed
> 0.01 sec
> test 14
> Start 14: TestReferenceCustomHbondForce
>
> 14: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceCustomHbondForce
> 14: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 14: Test timeout computed to be: 1500
> 6: Done
> 7/116 Test #6: TestReferenceCompoundIntegrator ............... Passed
> 0.03 sec
> test 15
> Start 15: TestReferenceCustomIntegrator
>
> 15: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceCustomIntegrator
> 15: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 15: Test timeout computed to be: 1500
> 14: Done
> 8/116 Test #14: TestReferenceCustomHbondForce ................. Passed
> 0.01 sec
> test 16
> Start 16: TestReferenceCustomManyParticleForce
>
> 16: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceCustomManyParticleForce
> 16: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 16: Test timeout computed to be: 1500
> 10: Done
> 9/116 Test #10: TestReferenceCustomCentroidBondForce .......... Passed
> 0.14 sec
> test 17
> Start 17: TestReferenceCustomNonbondedForce
>
> 17: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceCustomNonbondedForce
> 17: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 17: Test timeout computed to be: 1500
> 2: Done
> 10/116 Test #2: TestReferenceBrownianIntegrator ............... Passed
> 0.20 sec
> test 18
> Start 18: TestReferenceCustomTorsionForce
>
> 18: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceCustomTorsionForce
> 18: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 18: Test timeout computed to be: 1500
> 11: Done
> 11/116 Test #11: TestReferenceCustomCompoundBondForce .......... Passed
> 0.19 sec
> test 19
> Start 19: TestReferenceDispersionPME
>
> 19: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceDispersionPME
> 19: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 19: Test timeout computed to be: 1500
> 5: Done
> 12/116 Test #5: TestReferenceCheckpoints ...................... Passed
> 0.21 sec
> test 20
> Start 20: TestReferenceEwald
>
> 20: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceEwald
> 20: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 20: Test timeout computed to be: 1500
> 18: Done
> 13/116 Test #18: TestReferenceCustomTorsionForce ............... Passed
> 0.01 sec
> test 21
> Start 21: TestReferenceGBSAOBCForce
>
> 21: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceGBSAOBCForce
> 21: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 21: Test timeout computed to be: 1500
> 1: Done
> 14/116 Test #1: TestReferenceAndersenThermostat ............... Passed
> 0.29 sec
> test 22
> Start 22: TestReferenceGayBerneForce
>
> 22: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceGayBerneForce
> 22: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 22: Test timeout computed to be: 1500
> 22: Done
> 15/116 Test #22: TestReferenceGayBerneForce .................... Passed
> 0.05 sec
> test 23
> Start 23: TestReferenceHarmonicAngleForce
>
> 23: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceHarmonicAngleForce
> 23: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 23: Test timeout computed to be: 1500
> 23: Done
> 16/116 Test #23: TestReferenceHarmonicAngleForce ............... Passed
> 0.01 sec
> test 24
> Start 24: TestReferenceHarmonicBondForce
>
> 24: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceHarmonicBondForce
> 24: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 24: Test timeout computed to be: 1500
> 24: Done
> 17/116 Test #24: TestReferenceHarmonicBondForce ................ Passed
> 0.00 sec
> test 25
> Start 25: TestReferenceKineticEnergy
>
> 25: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceKineticEnergy
> 25: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 25: Test timeout computed to be: 1500
> 25: Done
> 18/116 Test #25: TestReferenceKineticEnergy .................... Passed
> 0.00 sec
> test 26
> Start 26: TestReferenceLangevinIntegrator
>
> 26: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceLangevinIntegrator
> 26: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 26: Test timeout computed to be: 1500
> 13: Done
> 19/116 Test #13: TestReferenceCustomGBForce .................... Passed
> 0.31 sec
> test 27
> Start 27: TestReferenceLangevinMiddleIntegrator
>
> 27: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceLangevinMiddleIntegrator
> 27: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 27: Test timeout computed to be: 1500
> 26: Done
> 20/116 Test #26: TestReferenceLangevinIntegrator ............... Passed
> 0.12 sec
> test 28
> Start 28: TestReferenceLocalEnergyMinimizer
>
> 28: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceLocalEnergyMinimizer
> 28: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 28: Test timeout computed to be: 1500
> 20: Done
> 21/116 Test #20: TestReferenceEwald ............................ Passed
> 1.55 sec
> test 29
> Start 29: TestReferenceMonteCarloAnisotropicBarostat
>
> 29: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceMonteCarloAnisotropicBarostat
> 29: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 29: Test timeout computed to be: 1500
> 15: Done
> 22/116 Test #15: TestReferenceCustomIntegrator ................. Passed
> 1.81 sec
> test 30
> Start 30: TestReferenceMonteCarloBarostat
>
> 30: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceMonteCarloBarostat
> 30: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 30: Test timeout computed to be: 1500
> 27: Done
> 23/116 Test #27: TestReferenceLangevinMiddleIntegrator ......... Passed
> 1.57 sec
> test 31
> Start 31: TestReferenceMonteCarloFlexibleBarostat
>
> 31: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceMonteCarloFlexibleBarostat
> 31: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 31: Test timeout computed to be: 1500
> 19: Done
> 24/116 Test #19: TestReferenceDispersionPME .................... Passed
> 1.88 sec
> test 32
> Start 32: TestReferenceMonteCarloMembraneBarostat
>
> 32: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceMonteCarloMembraneBarostat
> 32: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 32: Test timeout computed to be: 1500
> 21: Done
> 25/116 Test #21: TestReferenceGBSAOBCForce ..................... Passed
> 2.19 sec
> test 33
> Start 33: TestReferenceNeighborList
>
> 33: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceNeighborList
> 33: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 33: Test timeout computed to be: 1500
> 30: Done
> 26/116 Test #30: TestReferenceMonteCarloBarostat ............... Passed
> 0.61 sec
> test 34
> Start 34: TestReferenceNonbondedForce
>
> 34: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceNonbondedForce
> 34: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 34: Test timeout computed to be: 1500
> 33: Done
> 27/116 Test #33: TestReferenceNeighborList ..................... Passed
> 0.09 sec
> test 35
> Start 35: TestReferenceNoseHooverIntegrator
>
> 35: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceNoseHooverIntegrator
> 35: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 35: Test timeout computed to be: 1500
> 31: Done
> 28/116 Test #31: TestReferenceMonteCarloFlexibleBarostat ....... Passed
> 0.61 sec
> test 36
> Start 36: TestReferencePeriodicTorsionForce
>
> 36: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferencePeriodicTorsionForce
> 36: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 36: Test timeout computed to be: 1500
> 36: Done
> 29/116 Test #36: TestReferencePeriodicTorsionForce ............. Passed
> 0.01 sec
> test 37
> Start 37: TestReferenceRBTorsionForce
>
> 37: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceRBTorsionForce
> 37: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 37: Test timeout computed to be: 1500
> 37: Done
> 30/116 Test #37: TestReferenceRBTorsionForce ................... Passed
> 0.00 sec
> test 38
> Start 38: TestReferenceRMSDForce
>
> 38: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceRMSDForce
> 38: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 38: Test timeout computed to be: 1500
> 38: Done
> 31/116 Test #38: TestReferenceRMSDForce ........................ Passed
> 0.00 sec
> test 39
> Start 39: TestReferenceRandom
>
> 39: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceRandom
> 39: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 39: Test timeout computed to be: 1500
> 28: Done
> 32/116 Test #28: TestReferenceLocalEnergyMinimizer ............. Passed
> 2.36 sec
> test 40
> Start 40: TestReferenceSettle
>
> 40: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceSettle
> 40: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 40: Test timeout computed to be: 1500
> 40: Done
> 33/116 Test #40: TestReferenceSettle ........................... Passed
> 0.06 sec
> test 41
> Start 41: TestReferenceVariableLangevinIntegrator
>
> 41: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceVariableLangevinIntegrator
> 41: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 41: Test timeout computed to be: 1500
> 34: Done
> 34/116 Test #34: TestReferenceNonbondedForce ................... Passed
> 0.68 sec
> test 42
> Start 42: TestReferenceVariableVerletIntegrator
>
> 42: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceVariableVerletIntegrator
> 42: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 42: Test timeout computed to be: 1500
> 39: Done
> 35/116 Test #39: TestReferenceRandom ........................... Passed
> 0.87 sec
> test 43
> Start 43: TestReferenceVerletIntegrator
>
> 43: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceVerletIntegrator
> 43: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 43: Test timeout computed to be: 1500
> 32: Done
> 36/116 Test #32: TestReferenceMonteCarloMembraneBarostat ....... Passed
> 1.98 sec
> test 44
> Start 44: TestReferenceVirtualSites
>
> 44: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceVirtualSites
> 44: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/reference/tests
> 44: Test timeout computed to be: 1500
> 44: Done
> 37/116 Test #44: TestReferenceVirtualSites ..................... Passed
> 0.04 sec
> test 45
> Start 45: TestCpuCheckpoints
>
> 45: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestCpuCheckpoints
> "single"
> 45: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/cpu/tests
> 45: Test timeout computed to be: 1500
> 45: Done
> 38/116 Test #45: TestCpuCheckpoints ............................ Passed
> 0.08 sec
> test 46
> Start 46: TestCpuCompoundIntegrator
>
> 46: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestCpuCompoundIntegrator "single"
> 46: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/cpu/tests
> 46: Test timeout computed to be: 1500
> 43: Done
> 39/116 Test #43: TestReferenceVerletIntegrator ................. Passed
> 0.89 sec
> test 47
> Start 47: TestCpuCustomGBForce
>
> 47: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestCpuCustomGBForce
> "single"
> 47: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/cpu/tests
> 47: Test timeout computed to be: 1500
> 29: Done
> 40/116 Test #29: TestReferenceMonteCarloAnisotropicBarostat .... Passed
> 2.68 sec
> test 48
> Start 48: TestCpuCustomManyParticleForce
>
> 48: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestCpuCustomManyParticleForce "single"
> 48: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/cpu/tests
> 48: Test timeout computed to be: 1500
> 47: Done
> 41/116 Test #47: TestCpuCustomGBForce .......................... Passed
> 0.60 sec
> test 49
> Start 49: TestCpuCustomNonbondedForce
>
> 49: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestCpuCustomNonbondedForce "single"
> 49: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/cpu/tests
> 49: Test timeout computed to be: 1500
> 35: Done
> 42/116 Test #35: TestReferenceNoseHooverIntegrator ............. Passed
> 6.98 sec
> test 50
> Start 50: TestCpuDispersionPME
>
> 50: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestCpuDispersionPME
> "single"
> 50: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/cpu/tests
> 50: Test timeout computed to be: 1500
> 49: Done
> 43/116 Test #49: TestCpuCustomNonbondedForce ................... Passed
> 4.60 sec
> test 51
> Start 51: TestCpuEwald
>
> 51: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestCpuEwald "single"
> 51: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/cpu/tests
> 51: Test timeout computed to be: 1500
> 42: Done
> 44/116 Test #42: TestReferenceVariableVerletIntegrator ......... Passed
> 6.89 sec
> test 52
> Start 52: TestCpuGBSAOBCForce
>
> 52: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestCpuGBSAOBCForce
> "single"
> 52: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/cpu/tests
> 52: Test timeout computed to be: 1500
> 50: Done
> 45/116 Test #50: TestCpuDispersionPME .......................... Passed
> 1.69 sec
> test 53
> Start 53: TestCpuGayBerneForce
>
> 53: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestCpuGayBerneForce
> "single"
> 53: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/cpu/tests
> 53: Test timeout computed to be: 1500
> 52: Done
> 46/116 Test #52: TestCpuGBSAOBCForce ........................... Passed
> 1.17 sec
> test 54
> Start 54: TestCpuHarmonicAngleForce
>
> 54: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestCpuHarmonicAngleForce "single"
> 54: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/cpu/tests
> 54: Test timeout computed to be: 1500
> 54: Done
> 47/116 Test #54: TestCpuHarmonicAngleForce ..................... Passed
> 0.02 sec
> test 55
> Start 55: TestCpuLangevinIntegrator
>
> 55: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestCpuLangevinIntegrator "single"
> 55: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/cpu/tests
> 55: Test timeout computed to be: 1500
> 51: Done
> 48/116 Test #51: TestCpuEwald .................................. Passed
> 1.75 sec
> test 56
> Start 56: TestCpuLangevinMiddleIntegrator
>
> 56: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestCpuLangevinMiddleIntegrator "single"
> 56: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/cpu/tests
> 56: Test timeout computed to be: 1500
> 53: Done
> 49/116 Test #53: TestCpuGayBerneForce .......................... Passed
> 0.59 sec
> test 57
> Start 57: TestCpuNeighborList
>
> 57: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestCpuNeighborList
> "single"
> 57: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/cpu/tests
> 57: Test timeout computed to be: 1500
> 57: Done
> 50/116 Test #57: TestCpuNeighborList ........................... Passed
> 0.15 sec
> test 58
> Start 58: TestCpuNonbondedForce
>
> 58: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestCpuNonbondedForce
> "single"
> 58: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/cpu/tests
> 58: Test timeout computed to be: 1500
> 46: Done
> 51/116 Test #46: TestCpuCompoundIntegrator ..................... Passed
> 7.77 sec
> test 59
> Start 59: TestCpuPeriodicTorsionForce
>
> 59: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestCpuPeriodicTorsionForce "single"
> 59: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/cpu/tests
> 59: Test timeout computed to be: 1500
> 59: Done
> 52/116 Test #59: TestCpuPeriodicTorsionForce ................... Passed
> 0.01 sec
> test 60
> Start 60: TestCpuRBTorsionForce
>
> 60: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestCpuRBTorsionForce
> "single"
> 60: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/cpu/tests
> 60: Test timeout computed to be: 1500
> 60: Done
> 53/116 Test #60: TestCpuRBTorsionForce ......................... Passed
> 0.02 sec
> test 61
> Start 61: TestCpuSettle
>
> 61: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestCpuSettle "single"
> 61: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/platforms/cpu/tests
> 61: Test timeout computed to be: 1500
> 61: Done
> 54/116 Test #61: TestCpuSettle ................................. Passed
> 0.90 sec
> test 62
> Start 62: TestReferenceAmoebaExtrapolatedPolarization
>
> 62: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceAmoebaExtrapolatedPolarization
> 62: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests
> 62: Test timeout computed to be: 1500
> 58: Done
> 55/116 Test #58: TestCpuNonbondedForce ......................... Passed
> 1.20 sec
> test 63
> Start 63: TestReferenceAmoebaGeneralizedKirkwoodForce
>
> 63: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceAmoebaGeneralizedKirkwoodForce
> 63: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests
> 63: Test timeout computed to be: 1500
> 62: Done
> 56/116 Test #62: TestReferenceAmoebaExtrapolatedPolarization ... Passed
> 0.97 sec
> test 64
> Start 64: TestReferenceAmoebaMultipoleForce
>
> 64: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceAmoebaMultipoleForce
> 64: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests
> 64: Test timeout computed to be: 1500
> 64: Done
> 57/116 Test #64: TestReferenceAmoebaMultipoleForce ............. Passed
> 1.41 sec
> test 65
> Start 65: TestReferenceAmoebaTorsionTorsionForce
>
> 65: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceAmoebaTorsionTorsionForce
> 65: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests
> 65: Test timeout computed to be: 1500
> 65: Done
> 58/116 Test #65: TestReferenceAmoebaTorsionTorsionForce ........ Passed
> 0.01 sec
> test 66
> Start 66: TestReferenceAmoebaVdwForce
>
> 66: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceAmoebaVdwForce
> 66: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests
> 66: Test timeout computed to be: 1500
> 66: Done
> 59/116 Test #66: TestReferenceAmoebaVdwForce ................... Passed
> 0.22 sec
> test 67
> Start 67: TestReferenceHippoNonbondedForce
>
> 67: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceHippoNonbondedForce
> 67: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests
> 67: Test timeout computed to be: 1500
> 67: Done
> 60/116 Test #67: TestReferenceHippoNonbondedForce .............. Passed
> 0.92 sec
> test 68
> Start 68: TestReferenceWcaDispersionForce
>
> 68: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceWcaDispersionForce
> 68: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests
> 68: Test timeout computed to be: 1500
> 68: Done
> 61/116 Test #68: TestReferenceWcaDispersionForce ............... Passed
> 0.01 sec
> test 69
> Start 69: TestReferenceRpmd
>
> 69: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceRpmd
> 69: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference/tests
> 69: Test timeout computed to be: 1500
> 63: Done
> 62/116 Test #63: TestReferenceAmoebaGeneralizedKirkwoodForce ... Passed
> 10.83 sec
> test 70
> Start 70: TestReferenceDrudeForce
>
> 70: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceDrudeForce
> 70: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests
> 70: Test timeout computed to be: 1500
> 70: Done
> 63/116 Test #70: TestReferenceDrudeForce ....................... Passed
> 0.01 sec
> test 71
> Start 71: TestReferenceDrudeLangevinIntegrator
>
> 71: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceDrudeLangevinIntegrator
> 71: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests
> 71: Test timeout computed to be: 1500
> 56: Done
> 64/116 Test #56: TestCpuLangevinMiddleIntegrator ............... Passed
> 13.89 sec
> test 72
> Start 72: TestReferenceDrudeNoseHoover
>
> 72: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceDrudeNoseHoover
> 72: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests
> 72: Test timeout computed to be: 1500
> 55: Done
> 65/116 Test #55: TestCpuLangevinIntegrator ..................... Passed
> 17.81 sec
> test 73
> Start 73: TestReferenceDrudeSCFIntegrator
>
> 73: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestReferenceDrudeSCFIntegrator
> 73: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests
> 73: Test timeout computed to be: 1500
> 48: Done
> 66/116 Test #48: TestCpuCustomManyParticleForce ................ Passed
> 26.89 sec
> test 74
> Start 74: TestCpuPme
>
> 74: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestCpuPme
> 74: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/plugins/cpupme/tests
> 74: Test timeout computed to be: 1500
> 74: Done
> 67/116 Test #74: TestCpuPme .................................... Passed
> 0.34 sec
> test 75
> Start 75: TestSerializationNode
>
> 75: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializationNode
> 75: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 75: Test timeout computed to be: 1500
> 75: Done
> 68/116 Test #75: TestSerializationNode ......................... Passed
> 0.00 sec
> test 76
> Start 76: TestSerializeAndersenThermostat
>
> 76: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeAndersenThermostat
> 76: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 76: Test timeout computed to be: 1500
> 76: Done
> 69/116 Test #76: TestSerializeAndersenThermostat ............... Passed
> 0.00 sec
> test 77
> Start 77: TestSerializeCMAPTorsion
>
> 77: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeCMAPTorsion
> 77: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 77: Test timeout computed to be: 1500
> 77: Done
> 70/116 Test #77: TestSerializeCMAPTorsion ...................... Passed
> 0.00 sec
> test 78
> Start 78: TestSerializeCMMotionRemover
>
> 78: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeCMMotionRemover
> 78: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 78: Test timeout computed to be: 1500
> 78: Done
> 71/116 Test #78: TestSerializeCMMotionRemover .................. Passed
> 0.00 sec
> test 79
> Start 79: TestSerializeCustomAngleForce
>
> 79: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeCustomAngleForce
> 79: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 79: Test timeout computed to be: 1500
> 79: Done
> 72/116 Test #79: TestSerializeCustomAngleForce ................. Passed
> 0.00 sec
> test 80
> Start 80: TestSerializeCustomBondForce
>
> 80: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeCustomBondForce
> 80: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 80: Test timeout computed to be: 1500
> 80: Done
> 73/116 Test #80: TestSerializeCustomBondForce .................. Passed
> 0.00 sec
> test 81
> Start 81: TestSerializeCustomCVForce
>
> 81: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeCustomCVForce
> 81: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 81: Test timeout computed to be: 1500
> 81: Done
> 74/116 Test #81: TestSerializeCustomCVForce .................... Passed
> 0.00 sec
> test 82
> Start 82: TestSerializeCustomCentroidBondForce
>
> 82: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeCustomCentroidBondForce
> 82: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 82: Test timeout computed to be: 1500
> 82: Done
> 75/116 Test #82: TestSerializeCustomCentroidBondForce .......... Passed
> 0.00 sec
> test 83
> Start 83: TestSerializeCustomCompoundBondForce
>
> 83: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeCustomCompoundBondForce
> 83: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 83: Test timeout computed to be: 1500
> 83: Done
> 76/116 Test #83: TestSerializeCustomCompoundBondForce .......... Passed
> 0.00 sec
> test 84
> Start 84: TestSerializeCustomExternalForce
>
> 84: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeCustomExternalForce
> 84: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 84: Test timeout computed to be: 1500
> 84: Done
> 77/116 Test #84: TestSerializeCustomExternalForce .............. Passed
> 0.00 sec
> test 85
> Start 85: TestSerializeCustomGBForce
>
> 85: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeCustomGBForce
> 85: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 85: Test timeout computed to be: 1500
> 85: Done
> 78/116 Test #85: TestSerializeCustomGBForce .................... Passed
> 0.00 sec
> test 86
> Start 86: TestSerializeCustomHbondForce
>
> 86: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeCustomHbondForce
> 86: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 86: Test timeout computed to be: 1500
> 86: Done
> 79/116 Test #86: TestSerializeCustomHbondForce ................. Passed
> 0.00 sec
> test 87
> Start 87: TestSerializeCustomManyParticleForce
>
> 87: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeCustomManyParticleForce
> 87: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 87: Test timeout computed to be: 1500
> 87: Done
> 80/116 Test #87: TestSerializeCustomManyParticleForce .......... Passed
> 0.00 sec
> test 88
> Start 88: TestSerializeCustomNonbondedForce
>
> 88: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeCustomNonbondedForce
> 88: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 88: Test timeout computed to be: 1500
> 88: Done
> 81/116 Test #88: TestSerializeCustomNonbondedForce ............. Passed
> 0.00 sec
> test 89
> Start 89: TestSerializeCustomTorsionForce
>
> 89: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeCustomTorsionForce
> 89: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 89: Test timeout computed to be: 1500
> 89: Done
> 82/116 Test #89: TestSerializeCustomTorsionForce ............... Passed
> 0.00 sec
> test 90
> Start 90: TestSerializeGBSAOBCForce
>
> 90: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeGBSAOBCForce
> 90: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 90: Test timeout computed to be: 1500
> 90: Done
> 83/116 Test #90: TestSerializeGBSAOBCForce ..................... Passed
> 0.00 sec
> test 91
> Start 91: TestSerializeGayBerneForce
>
> 91: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeGayBerneForce
> 91: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 91: Test timeout computed to be: 1500
> 91: Done
> 84/116 Test #91: TestSerializeGayBerneForce .................... Passed
> 0.00 sec
> test 92
> Start 92: TestSerializeHarmonicAngleForce
>
> 92: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeHarmonicAngleForce
> 92: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 92: Test timeout computed to be: 1500
> 92: Done
> 85/116 Test #92: TestSerializeHarmonicAngleForce ............... Passed
> 0.00 sec
> test 93
> Start 93: TestSerializeHarmonicBondForce
>
> 93: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeHarmonicBondForce
> 93: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 93: Test timeout computed to be: 1500
> 93: Done
> 86/116 Test #93: TestSerializeHarmonicBondForce ................ Passed
> 0.00 sec
> test 94
> Start 94: TestSerializeIntegrator
>
> 94: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeIntegrator
> 94: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 94: Test timeout computed to be: 1500
> 94: Done
> 87/116 Test #94: TestSerializeIntegrator ....................... Passed
> 0.01 sec
> test 95
> Start 95: TestSerializeMonteCarloAnisotropicBarostat
>
> 95: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeMonteCarloAnisotropicBarostat
> 95: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 95: Test timeout computed to be: 1500
> 95: Done
> 88/116 Test #95: TestSerializeMonteCarloAnisotropicBarostat .... Passed
> 0.00 sec
> test 96
> Start 96: TestSerializeMonteCarloBarostat
>
> 96: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeMonteCarloBarostat
> 96: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 96: Test timeout computed to be: 1500
> 96: Done
> 89/116 Test #96: TestSerializeMonteCarloBarostat ............... Passed
> 0.00 sec
> test 97
> Start 97: TestSerializeMonteCarloFlexibleBarostat
>
> 97: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeMonteCarloFlexibleBarostat
> 97: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 97: Test timeout computed to be: 1500
> 97: Done
> 90/116 Test #97: TestSerializeMonteCarloFlexibleBarostat ....... Passed
> 0.00 sec
> test 98
> Start 98: TestSerializeMonteCarloMembraneBarostat
>
> 98: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeMonteCarloMembraneBarostat
> 98: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 98: Test timeout computed to be: 1500
> 98: Done
> 91/116 Test #98: TestSerializeMonteCarloMembraneBarostat ....... Passed
> 0.00 sec
> test 99
> Start 99: TestSerializeNonbondedForce
>
> 99: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeNonbondedForce
> 99: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 99: Test timeout computed to be: 1500
> 99: Done
> 92/116 Test #99: TestSerializeNonbondedForce ................... Passed
> 0.00 sec
> test 100
> Start 100: TestSerializeNoseHooverIntegrator
>
> 100: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeNoseHooverIntegrator
> 100: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 100: Test timeout computed to be: 1500
> 100: Done
> 93/116 Test #100: TestSerializeNoseHooverIntegrator ............. Passed
> 0.00 sec
> test 101
> Start 101: TestSerializePeriodicTorsionForce
>
> 101: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializePeriodicTorsionForce
> 101: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 101: Test timeout computed to be: 1500
> 101: Done
> 94/116 Test #101: TestSerializePeriodicTorsionForce ............. Passed
> 0.00 sec
> test 102
> Start 102: TestSerializeRBTorsionForce
>
> 102: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeRBTorsionForce
> 102: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 102: Test timeout computed to be: 1500
> 102: Done
> 95/116 Test #102: TestSerializeRBTorsionForce ................... Passed
> 0.00 sec
> test 103
> Start 103: TestSerializeRMSDForce
>
> 103: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeRMSDForce
> 103: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 103: Test timeout computed to be: 1500
> 103: Done
> 96/116 Test #103: TestSerializeRMSDForce ........................ Passed
> 0.00 sec
> test 104
> Start 104: TestSerializeState
>
> 104: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeState
> 104: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 104: Test timeout computed to be: 1500
> 104: Done
> 97/116 Test #104: TestSerializeState ............................ Passed
> 0.02 sec
> test 105
> Start 105: TestSerializeSystem
>
> 105: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeSystem
> 105: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 105: Test timeout computed to be: 1500
> 105: Done
> 98/116 Test #105: TestSerializeSystem ........................... Passed
> 0.01 sec
> test 106
> Start 106: TestSerializeTabulatedFunctions
>
> 106: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSerializeTabulatedFunctions
> 106: Working Directory:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/serialization/tests
> 106: Test timeout computed to be: 1500
> 106: Done
> 99/116 Test #106: TestSerializeTabulatedFunctions ............... Passed
> 0.01 sec
> test 107
> Start 107: TestEnforcePeriodicBox
>
> 107: Test command:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestEnforcePeriodicBox
> 107: Working Directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/tests
> 107: Test timeout computed to be: 1500
> 107: Done
> 100/116 Test #107: TestEnforcePeriodicBox ........................ Passed
> 0.01 sec
> test 108
> Start 108: TestFindExclusions
>
> 108: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestFindExclusions
> 108: Working Directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/tests
> 108: Test timeout computed to be: 1500
> 108: Done
> 101/116 Test #108: TestFindExclusions ............................ Passed
> 0.00 sec
> test 109
> Start 109: TestFindMolecules
>
> 109: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestFindMolecules
> 109: Working Directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/tests
> 109: Test timeout computed to be: 1500
> 109: Done
> 102/116 Test #109: TestFindMolecules ............................. Passed
> 0.01 sec
> test 110
> Start 110: TestParser
>
> 110: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestParser
> 110: Working Directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/tests
> 110: Test timeout computed to be: 1500
> 110: square(x)
> 110: cube(x)
> 110: cube(x)
> 110: 6*(x)
> 110: recip(1+(x))
> 110: sqrt(x)
> 110: 1
> 110: Done
> 103/116 Test #110: TestParser .................................... Passed
> 0.13 sec
> test 111
> Start 111: TestSplineFitter
>
> 111: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSplineFitter
> 111: Working Directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/tests
> 111: Test timeout computed to be: 1500
> 111: Done
> 104/116 Test #111: TestSplineFitter .............................. Passed
> 0.02 sec
> test 112
> Start 112: TestSystem
>
> 112: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestSystem
> 112: Working Directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/tests
> 112: Test timeout computed to be: 1500
> 112: Done
> 105/116 Test #112: TestSystem .................................... Passed
> 0.00 sec
> test 113
> Start 113: TestVectorExpression
>
> 113: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestVectorExpression
> 113: Working Directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/tests
> 113: Test timeout computed to be: 1500
> 113: Done
> 106/116 Test #113: TestVectorExpression .......................... Passed
> 0.00 sec
> test 114
> Start 114: TestVectorize
>
> 114: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestVectorize
> 114: Working Directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/tests
> 114: Test timeout computed to be: 1500
> 114: Done
> 107/116 Test #114: TestVectorize ................................. Passed
> 0.00 sec
> test 115
> Start 115: TestVectorizeAvx
>
> 115: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestVectorizeAvx
> 115: Working Directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/tests
> 115: Test timeout computed to be: 1500
> 115: Done
> 108/116 Test #115: TestVectorizeAvx .............................. Passed
> 0.00 sec
> test 116
> Start 116: TestVectorizeAvx2
>
> 116: Test command: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/TestVectorizeAvx2
> 116: Working Directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/tests
> 116: Test timeout computed to be: 1500
> 116: Done
> 109/116 Test #116: TestVectorizeAvx2 ............................. Passed
> 0.00 sec
> 72: Done
> 110/116 Test #72: TestReferenceDrudeNoseHoover .................. Passed
> 10.15 sec
> 41: Done
> 111/116 Test #41: TestReferenceVariableLangevinIntegrator ....... Passed
> 35.50 sec
> 16: Done
> 112/116 Test #16: TestReferenceCustomManyParticleForce .......... Passed
> 41.26 sec
> 73: Done
> 113/116 Test #73: TestReferenceDrudeSCFIntegrator ............... Passed
> 15.82 sec
> 71: Done
> 114/116 Test #71: TestReferenceDrudeLangevinIntegrator .......... Passed
> 28.63 sec
> 17: Done
> 115/116 Test #17: TestReferenceCustomNonbondedForce ............. Passed
> 61.27 sec
> 69: Done
> 116/116 Test #69: TestReferenceRpmd ............................. Passed
> 127.93 sec
>
> 100% tests passed, 0 tests failed out of 116
>
> Total Test time (real) = 144.35 sec
> make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
> cd obj-*/python/tests && PYTHONPATH=../build/lib.linux-$(arch)-$(py3versions
> -d | sed 's/^python//') pytest-3
> ============================= test session starts
> ==============================
> platform linux -- Python 3.11.6, pytest-7.4.3, pluggy-1.3.0
> rootdir: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests
> configfile: pytest.ini
> collected 0 items / 30 errors
>
> ==================================== ERRORS
> ====================================
> _______________________ ERROR collecting TestAPIUnits.py
> _______________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestAPIUnits.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestAPIUnits.py:4: in <module>
> from openmm import *
> E ModuleNotFoundError: No module named 'openmm'
> ___________________ ERROR collecting TestAmberInpcrdFile.py
> ____________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestAmberInpcrdFile.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestAmberInpcrdFile.py:2: in <module>
> from validateConstraints import *
> validateConstraints.py:1: in <module>
> from openmm.app import *
> E ModuleNotFoundError: No module named 'openmm'
> ___________________ ERROR collecting TestAmberPrmtopFile.py
> ____________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestAmberPrmtopFile.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestAmberPrmtopFile.py:4: in <module>
> from validateConstraints import *
> validateConstraints.py:1: in <module>
> from openmm.app import *
> E ModuleNotFoundError: No module named 'openmm'
> ________________________ ERROR collecting TestBytes.py
> _________________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestBytes.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestBytes.py:2: in <module>
> import openmm as mm
> E ModuleNotFoundError: No module named 'openmm'
> _____________________ ERROR collecting TestCharmmFiles.py
> ______________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestCharmmFiles.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestCharmmFiles.py:2: in <module>
> from validateConstraints import *
> validateConstraints.py:1: in <module>
> from openmm.app import *
> E ModuleNotFoundError: No module named 'openmm'
> __________________ ERROR collecting TestCheckpointReporter.py
> __________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestCheckpointReporter.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestCheckpointReporter.py:4: in <module>
> from openmm import app
> E ModuleNotFoundError: No module named 'openmm'
> _______________________ ERROR collecting TestDcdFile.py
> ________________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestDcdFile.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestDcdFile.py:3: in <module>
> from openmm import app
> E ModuleNotFoundError: No module named 'openmm'
> ____________________ ERROR collecting TestDesmondDMSFile.py
> ____________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestDesmondDMSFile.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestDesmondDMSFile.py:3: in <module>
> from openmm.app import *
> E ModuleNotFoundError: No module named 'openmm'
> _______________________ ERROR collecting TestElement.py
> ________________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestElement.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestElement.py:3: in <module>
> from openmm.unit import dalton, is_quantity
> E ModuleNotFoundError: No module named 'openmm'
> ______________________ ERROR collecting TestForceField.py
> ______________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestForceField.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestForceField.py:2: in <module>
> from validateConstraints import *
> validateConstraints.py:1: in <module>
> from openmm.app import *
> E ModuleNotFoundError: No module named 'openmm'
> _____________________ ERROR collecting TestForceGroups.py
> ______________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestForceGroups.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestForceGroups.py:3: in <module>
> import openmm as mm
> E ModuleNotFoundError: No module named 'openmm'
> ______________________ ERROR collecting TestGenerators.py
> ______________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestGenerators.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestGenerators.py:2: in <module>
> from validateConstraints import *
> validateConstraints.py:1: in <module>
> from openmm.app import *
> E ModuleNotFoundError: No module named 'openmm'
> ____________________ ERROR collecting TestGromacsGroFile.py
> ____________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestGromacsGroFile.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestGromacsGroFile.py:2: in <module>
> from openmm.app import *
> E ModuleNotFoundError: No module named 'openmm'
> ____________________ ERROR collecting TestGromacsTopFile.py
> ____________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestGromacsTopFile.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestGromacsTopFile.py:2: in <module>
> from validateConstraints import *
> validateConstraints.py:1: in <module>
> from openmm.app import *
> E ModuleNotFoundError: No module named 'openmm'
> _____________________ ERROR collecting TestIntegrators.py
> ______________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestIntegrators.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestIntegrators.py:5: in <module>
> from openmm import *
> E ModuleNotFoundError: No module named 'openmm'
> _____________________ ERROR collecting TestMetadynamics.py
> _____________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestMetadynamics.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestMetadynamics.py:2: in <module>
> from openmm import *
> E ModuleNotFoundError: No module named 'openmm'
> _______________________ ERROR collecting TestModeller.py
> _______________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestModeller.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestModeller.py:5: in <module>
> from openmm.app import *
> E ModuleNotFoundError: No module named 'openmm'
> __________________ ERROR collecting TestNumpyCompatibility.py
> __________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestNumpyCompatibility.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestNumpyCompatibility.py:2: in <module>
> from openmm import app
> E ModuleNotFoundError: No module named 'openmm'
> _______________________ ERROR collecting TestPatches.py
> ________________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestPatches.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestPatches.py:2: in <module>
> from openmm.app import *
> E ModuleNotFoundError: No module named 'openmm'
> _______________________ ERROR collecting TestPdbFile.py
> ________________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestPdbFile.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestPdbFile.py:3: in <module>
> from openmm.app import *
> E ModuleNotFoundError: No module named 'openmm'
> _______________________ ERROR collecting TestPdbxFile.py
> _______________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestPdbxFile.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestPdbxFile.py:2: in <module>
> from openmm.app import *
> E ModuleNotFoundError: No module named 'openmm'
> ________________________ ERROR collecting TestPickle.py
> ________________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestPickle.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestPickle.py:2: in <module>
> from validateConstraints import *
> validateConstraints.py:1: in <module>
> from openmm.app import *
> E ModuleNotFoundError: No module named 'openmm'
> __________________ ERROR collecting TestSimulatedTempering.py
> __________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestSimulatedTempering.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestSimulatedTempering.py:2: in <module>
> from openmm import *
> E ModuleNotFoundError: No module named 'openmm'
> ______________________ ERROR collecting TestSimulation.py
> ______________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestSimulation.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestSimulation.py:4: in <module>
> from openmm import *
> E ModuleNotFoundError: No module named 'openmm'
> __________________ ERROR collecting TestStateDataReporter.py
> ___________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestStateDataReporter.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestStateDataReporter.py:3: in <module>
> from openmm import app
> E ModuleNotFoundError: No module named 'openmm'
> _____________________ ERROR collecting TestSwigWrappers.py
> _____________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestSwigWrappers.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestSwigWrappers.py:2: in <module>
> import openmm as mm
> E ModuleNotFoundError: No module named 'openmm'
> _______________________ ERROR collecting TestTopology.py
> _______________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestTopology.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestTopology.py:4: in <module>
> from openmm.app import *
> E ModuleNotFoundError: No module named 'openmm'
> _______________________ ERROR collecting TestUnitCell.py
> _______________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestUnitCell.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestUnitCell.py:3: in <module>
> from openmm import Vec3
> E ModuleNotFoundError: No module named 'openmm'
> ________________________ ERROR collecting TestUnits.py
> _________________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestUnits.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestUnits.py:6: in <module>
> from openmm import unit as u
> E ModuleNotFoundError: No module named 'openmm'
> _________________________ ERROR collecting TestVec3.py
> _________________________
> ImportError while importing test module
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/python/tests/TestVec3.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> TestVec3.py:3: in <module>
> from openmm import Vec3
> E ModuleNotFoundError: No module named 'openmm'
> =========================== short test summary info
> ============================
> ERROR TestAPIUnits.py
> ERROR TestAmberInpcrdFile.py
> ERROR TestAmberPrmtopFile.py
> ERROR TestBytes.py
> ERROR TestCharmmFiles.py
> ERROR TestCheckpointReporter.py
> ERROR TestDcdFile.py
> ERROR TestDesmondDMSFile.py
> ERROR TestElement.py
> ERROR TestForceField.py
> ERROR TestForceGroups.py
> ERROR TestGenerators.py
> ERROR TestGromacsGroFile.py
> ERROR TestGromacsTopFile.py
> ERROR TestIntegrators.py
> ERROR TestMetadynamics.py
> ERROR TestModeller.py
> ERROR TestNumpyCompatibility.py
> ERROR TestPatches.py
> ERROR TestPdbFile.py
> ERROR TestPdbxFile.py
> ERROR TestPickle.py
> ERROR TestSimulatedTempering.py
> ERROR TestSimulation.py
> ERROR TestStateDataReporter.py
> ERROR TestSwigWrappers.py
> ERROR TestTopology.py
> ERROR TestUnitCell.py
> ERROR TestUnits.py
> ERROR TestVec3.py
> !!!!!!!!!!!!!!!!!!! Interrupted: 30 errors during collection
> !!!!!!!!!!!!!!!!!!!
> ============================== 30 errors in 0.54s
> ==============================
> make[1]: *** [debian/rules:38: override_dh_auto_test] Error 2
The full build log is available from:
http://qa-logs.debian.net/2023/10/27/openmm_8.0.0+dfsg-2_unstable.log
All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20231027;users=lu...@debian.org
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20231027&fusertaguser=lu...@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
--- End Message ---
--- Begin Message ---
Source: openmm
Source-Version: 8.0.0+dfsg-3
Done: Andrius Merkys <mer...@debian.org>
We believe that the bug you reported is fixed in the latest version of
openmm, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1054...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andrius Merkys <mer...@debian.org> (supplier of updated openmm package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Tue, 31 Oct 2023 03:54:33 -0400
Source: openmm
Architecture: source
Version: 8.0.0+dfsg-3
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-de...@lists.alioth.debian.org>
Changed-By: Andrius Merkys <mer...@debian.org>
Closes: 1054763
Changes:
openmm (8.0.0+dfsg-3) unstable; urgency=medium
.
* Adjust tests to path changes (Closes: #1054763)
* Simplify debian/rules.
Checksums-Sha1:
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a4b683949b5e4c5507c12eca6ec5181d4e20275b 16616
openmm_8.0.0+dfsg-3.debian.tar.xz
58c567c2117b8ae05ba4fc6e0c0018a3579512c4 9545
openmm_8.0.0+dfsg-3_source.buildinfo
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