Your message dated Thu, 26 Oct 2023 00:32:43 +0000
with message-id <e1qvoil-004pbw...@fasolo.debian.org>
and subject line Bug#1051986: fixed in scalapack 2.2.1-3
has caused the Debian Bug report #1051986,
regarding scalapack: cmake files miss multiarch, referencing missing file
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
1051986: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1051986
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: scalapack
Version: 2.2.1-2
Severity: serious
Hi,
I'm building a package that can use scalapack; it uses cmake as build
system and fails configuring as such:
|dh_auto_configure -- \
| -DCMAKE_BUILD_TYPE= \
| -DBUILD_SHARED_LIBS=NO \
| -DBUILD_TESTING=YES \
| -DENABLE_SCALAPACK_MPI=YES
| cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake
|-DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None
|-DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var
|-DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON
|-DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF
|-DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON
|-DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run
|"-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON
|-DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_BUILD_TYPE=
|-DBUILD_SHARED_LIBS=NO -DBUILD_TESTING=YES -DENABLE_SCALAPACK_MPI=YES ..
|-- Setting build type to Release as none was set
|-- Will use the mpi_f08 Fortran module
|CMake Error at
|/usr/lib/cmake/scalapack-2.2.1.openmpi/scalapack-targets.cmake:93
|(message):
| The imported target "scalapack" references the file
|
| "/usr/lib/libscalapack-openmpi.so.2.2.1"
|
| but this file does not exist. Possible reasons include:
|
| * The file was deleted, renamed, or moved to another location.
|
| * An install or uninstall procedure did not complete successfully.
|
| * The installation package was faulty and contained
|
| "/usr/lib/cmake/scalapack-2.2.1.openmpi/scalapack-targets.cmake"
|
| but not all the files it references.
|
|Call Stack (most recent call first):
| /usr/lib/cmake/scalapack-2.2.1.openmpi/scalapack-config.cmake:2
|(include)
| CMakeLists.txt:61 (find_package)
Looking at
/usr/lib/cmake/scalapack-2.2.1.openmpi/scalapack-targets-none.cmake it
does not take multiarch into account:
|# grep PREFIX.*openmpi
/usr/lib/cmake/scalapack-2.2.1.openmpi/scalapack-targets-none.cmake
| IMPORTED_LOCATION_NONE "${_IMPORT_PREFIX}/lib/libscalapack-openmpi.so.2.2.1"
|list(APPEND _cmake_import_check_files_for_scalapack
"${_IMPORT_PREFIX}/lib/libscalapack-openmpi.so.2.2.1" )
If I add (see attached patch), the build goes fine. I have not looked so
far at what it would take to change in the scalapack build system to fix
this.
Michael
-- System Information:
Debian Release: 10.13
APT prefers oldoldstable-updates
APT policy: (500, 'oldoldstable-updates'), (500, 'oldoldstable')
Architecture: amd64 (x86_64)
Foreign Architectures: i386
Kernel: Linux 4.19.0-22-amd64 (SMP w/2 CPU cores)
Kernel taint flags: TAINT_UNSIGNED_MODULE
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8),
LANGUAGE=en_US:en (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
--- /usr/lib/cmake/scalapack-2.2.1.openmpi/scalapack-targets-none.cmake 2023-09-15 11:27:13.423032655 +0000
+++ /usr/lib/cmake/scalapack-2.2.1.openmpi/scalapack-targets-none.cmake.new 2023-09-15 11:26:56.347447809 +0000
@@ -8,12 +8,12 @@
# Import target "scalapack" for configuration "None"
set_property(TARGET scalapack APPEND PROPERTY IMPORTED_CONFIGURATIONS NONE)
set_target_properties(scalapack PROPERTIES
- IMPORTED_LOCATION_NONE "${_IMPORT_PREFIX}/lib/libscalapack-openmpi.so.2.2.1"
+ IMPORTED_LOCATION_NONE "${_IMPORT_PREFIX}/lib/${CMAKE_LIBRARY_ARCHITECTURE}/libscalapack-openmpi.so.2.2.1"
IMPORTED_SONAME_NONE "libscalapack-openmpi.so.2.2"
)
list(APPEND _cmake_import_check_targets scalapack )
-list(APPEND _cmake_import_check_files_for_scalapack "${_IMPORT_PREFIX}/lib/libscalapack-openmpi.so.2.2.1" )
+list(APPEND _cmake_import_check_files_for_scalapack "${_IMPORT_PREFIX}/lib/${CMAKE_LIBRARY_ARCHITECTURE}/libscalapack-openmpi.so.2.2.1" )
# Commands beyond this point should not need to know the version.
set(CMAKE_IMPORT_FILE_VERSION)
--- End Message ---
--- Begin Message ---
Source: scalapack
Source-Version: 2.2.1-3
Done: Drew Parsons <dpars...@debian.org>
We believe that the bug you reported is fixed in the latest version of
scalapack, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1051...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Drew Parsons <dpars...@debian.org> (supplier of updated scalapack package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Thu, 26 Oct 2023 00:08:06 +0200
Source: scalapack
Architecture: source
Version: 2.2.1-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<debian-science-maintain...@lists.alioth.debian.org>
Changed-By: Drew Parsons <dpars...@debian.org>
Closes: 1051986
Changes:
scalapack (2.2.1-3) unstable; urgency=medium
.
* Team upload.
.
[ Debian Janitor ]
* Trim trailing whitespace.
* Use secure URI in Homepage field.
* Update renamed lintian tag names in lintian overrides.
* Set upstream metadata fields: Repository-Browse.
* Fix day-of-week for changelog entry 1.8.0-7.
* Avoid explicitly specifying -Wl,--as-needed linker flag.
.
[ Drew Parsons ]
* debian patch install_libdir_multiarch.patch installs libraries,
cmake and pkgconfig files into multiarch destinations
(CMAKE_INSTALL_LIBDIR from GNUInstallDirs). Closes: #1051986.
* extend debian patch sharedlibs-soname.patch to add MPI_FLAVOR
suffix to installed pkgconfig files and cmake install dirs.
Simplifies package install scripts (executable scripts no longer
needed).
* debian/rules: set LD_LIBRARY_PATH to new libraries only when
running tests
* Standards-Version: 4.6.2
Checksums-Sha1:
d08f68dec06806cdf493af5f92730ba4eb9a393d 2669 scalapack_2.2.1-3.dsc
4d07fe790aa3349b40b1b4dba4c079bb2205c38d 14916 scalapack_2.2.1-3.debian.tar.xz
Checksums-Sha256:
900e4703c1ed7c79082f819320813c3c44138574b6bb3a3dcb0733144e66d1e5 2669
scalapack_2.2.1-3.dsc
9fd0088320cfde8cf436a2e41bd85fccb9ea9e823ee0b238d745200f0e3be747 14916
scalapack_2.2.1-3.debian.tar.xz
Files:
2c3c776db05a266fd50a2990822e46b9 2669 devel optional scalapack_2.2.1-3.dsc
7811233c6f6ad32c911d0b581c1ac60a 14916 devel optional
scalapack_2.2.1-3.debian.tar.xz
-----BEGIN PGP SIGNATURE-----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=MD1h
-----END PGP SIGNATURE-----
--- End Message ---
