Your message dated Fri, 18 Aug 2023 11:49:57 +0000 with message-id <e1qwxzj-00aobh...@fasolo.debian.org> and subject line Bug#1042133: fixed in nipype 1.8.6-1 has caused the Debian Bug report #1042133, regarding nipype: FTBFS: make[1]: *** [debian/rules:39: override_dh_auto_test] Error 2 to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 1042133: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1042133 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: nipype Version: 1.8.5-3 Severity: serious Justification: FTBFS Tags: trixie sid ftbfs User: lu...@debian.org Usertags: ftbfs-20230726 ftbfs-trixie Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > =========================== short test summary info > ============================ > ERROR ../nipype/algorithms/metrics.py - > nibabel.deprecator.ExpiredDeprecation... > ERROR ../nipype/algorithms/misc.py - > nibabel.deprecator.ExpiredDeprecationErr... > ERROR ../nipype/algorithms/tests/test_ErrorMap.py - > nibabel.deprecator.Expire... > ERROR ../nipype/algorithms/tests/test_ErrorMap.py - > nibabel.deprecator.Expire... > ERROR ../nipype/algorithms/tests/test_TSNR.py - > nibabel.deprecator.ExpiredDep... > ERROR ../nipype/algorithms/tests/test_TSNR.py - > nibabel.deprecator.ExpiredDep... > ERROR ../nipype/algorithms/tests/test_auto_AddCSVColumn.py - > nibabel.deprecat... > ERROR ../nipype/algorithms/tests/test_auto_AddCSVColumn.py - > nibabel.deprecat... > ERROR ../nipype/algorithms/tests/test_auto_AddCSVRow.py - > nibabel.deprecator.... > ERROR ../nipype/algorithms/tests/test_auto_AddCSVRow.py - > nibabel.deprecator.... > ERROR ../nipype/algorithms/tests/test_auto_AddNoise.py - > nibabel.deprecator.E... > ERROR ../nipype/algorithms/tests/test_auto_AddNoise.py - > nibabel.deprecator.E... > ERROR ../nipype/algorithms/tests/test_auto_CalculateMedian.py - > nibabel.depre... > ERROR ../nipype/algorithms/tests/test_auto_CalculateMedian.py - > nibabel.depre... > ERROR ../nipype/algorithms/tests/test_auto_CalculateNormalizedMoments.py - > ni... > ERROR ../nipype/algorithms/tests/test_auto_CalculateNormalizedMoments.py - > ni... > ERROR ../nipype/algorithms/tests/test_auto_CreateNifti.py - > nibabel.deprecato... > ERROR ../nipype/algorithms/tests/test_auto_CreateNifti.py - > nibabel.deprecato... > ERROR ../nipype/algorithms/tests/test_auto_Distance.py - > nibabel.deprecator.E... > ERROR ../nipype/algorithms/tests/test_auto_Distance.py - > nibabel.deprecator.E... > ERROR ../nipype/algorithms/tests/test_auto_FuzzyOverlap.py - > nibabel.deprecat... > ERROR ../nipype/algorithms/tests/test_auto_FuzzyOverlap.py - > nibabel.deprecat... > ERROR ../nipype/algorithms/tests/test_auto_Gunzip.py - > nibabel.deprecator.Exp... > ERROR ../nipype/algorithms/tests/test_auto_Gunzip.py - > nibabel.deprecator.Exp... > ERROR ../nipype/algorithms/tests/test_auto_Gzip.py - > nibabel.deprecator.Expir... > ERROR ../nipype/algorithms/tests/test_auto_Gzip.py - > nibabel.deprecator.Expir... > ERROR ../nipype/algorithms/tests/test_auto_Matlab2CSV.py - > nibabel.deprecator... > ERROR ../nipype/algorithms/tests/test_auto_Matlab2CSV.py - > nibabel.deprecator... > ERROR ../nipype/algorithms/tests/test_auto_MergeCSVFiles.py - > nibabel.depreca... > ERROR ../nipype/algorithms/tests/test_auto_MergeCSVFiles.py - > nibabel.depreca... > ERROR ../nipype/algorithms/tests/test_auto_MergeROIs.py - > nibabel.deprecator.... > ERROR ../nipype/algorithms/tests/test_auto_MergeROIs.py - > nibabel.deprecator.... > ERROR ../nipype/algorithms/tests/test_auto_ModifyAffine.py - > nibabel.deprecat... > ERROR ../nipype/algorithms/tests/test_auto_ModifyAffine.py - > nibabel.deprecat... > ERROR ../nipype/algorithms/tests/test_auto_NormalizeProbabilityMapSet.py - > ni... > ERROR ../nipype/algorithms/tests/test_auto_NormalizeProbabilityMapSet.py - > ni... > ERROR ../nipype/algorithms/tests/test_auto_PickAtlas.py - > nibabel.deprecator.... > ERROR ../nipype/algorithms/tests/test_auto_PickAtlas.py - > nibabel.deprecator.... > ERROR ../nipype/algorithms/tests/test_auto_Similarity.py - > nibabel.deprecator... > ERROR ../nipype/algorithms/tests/test_auto_Similarity.py - > nibabel.deprecator... > ERROR ../nipype/algorithms/tests/test_auto_SimpleThreshold.py - > nibabel.depre... > ERROR ../nipype/algorithms/tests/test_auto_SimpleThreshold.py - > nibabel.depre... > ERROR ../nipype/algorithms/tests/test_auto_SplitROIs.py - > nibabel.deprecator.... > ERROR ../nipype/algorithms/tests/test_auto_SplitROIs.py - > nibabel.deprecator.... > ERROR ../nipype/algorithms/tests/test_metrics.py - > nibabel.deprecator.Expired... > ERROR ../nipype/algorithms/tests/test_metrics.py - > nibabel.deprecator.Expired... > ERROR ../nipype/algorithms/tests/test_misc.py - > nibabel.deprecator.ExpiredDep... > ERROR ../nipype/algorithms/tests/test_misc.py - > nibabel.deprecator.ExpiredDep... > ERROR ../nipype/algorithms/tests/test_moments.py - > nibabel.deprecator.Expired... > ERROR ../nipype/algorithms/tests/test_moments.py - > nibabel.deprecator.Expired... > ERROR ../nipype/algorithms/tests/test_normalize_tpms.py - > nibabel.deprecator.... > ERROR ../nipype/algorithms/tests/test_normalize_tpms.py - > nibabel.deprecator.... > ERROR ../nipype/interfaces/nipy/__init__.py - > nibabel.deprecator.ExpiredDepre... > ERROR ../nipype/interfaces/nipy/base.py - > nibabel.deprecator.ExpiredDeprecati... > ERROR ../nipype/interfaces/nipy/model.py - > nibabel.deprecator.ExpiredDeprecat... > ERROR ../nipype/interfaces/nipy/preprocess.py - > nibabel.deprecator.ExpiredDep... > ERROR ../nipype/interfaces/nipy/utils.py - > nibabel.deprecator.ExpiredDeprecat... > ERROR ../nipype/interfaces/nipy/tests/__init__.py - > nibabel.deprecator.Expire... > ERROR ../nipype/interfaces/nipy/tests/test_auto_ComputeMask.py - > nibabel.depr... > ERROR ../nipype/interfaces/nipy/tests/test_auto_ComputeMask.py - > nibabel.depr... > ERROR ../nipype/interfaces/nipy/tests/test_auto_EstimateContrast.py - > nibabel... > ERROR ../nipype/interfaces/nipy/tests/test_auto_EstimateContrast.py - > nibabel... > ERROR ../nipype/interfaces/nipy/tests/test_auto_FitGLM.py - > nibabel.deprecato... > ERROR ../nipype/interfaces/nipy/tests/test_auto_FitGLM.py - > nibabel.deprecato... > ERROR ../nipype/interfaces/nipy/tests/test_auto_NipyBaseInterface.py - > nibabe... > ERROR ../nipype/interfaces/nipy/tests/test_auto_NipyBaseInterface.py - > nibabe... > ERROR ../nipype/interfaces/nipy/tests/test_auto_Similarity.py - > nibabel.depre... > ERROR ../nipype/interfaces/nipy/tests/test_auto_Similarity.py - > nibabel.depre... > ERROR ../nipype/interfaces/nipy/tests/test_auto_SpaceTimeRealigner.py - > nibab... > ERROR ../nipype/interfaces/nipy/tests/test_auto_SpaceTimeRealigner.py - > nibab... > ERROR ../nipype/interfaces/nipy/tests/test_auto_Trim.py - > nibabel.deprecator.... > ERROR ../nipype/interfaces/nipy/tests/test_auto_Trim.py - > nibabel.deprecator.... > !!!!!!!!!!!!!!!!!!! Interrupted: 72 errors during collection > !!!!!!!!!!!!!!!!!!! > ================ 1 deselected, 20 warnings, 72 errors in 19.85s > ================ > make[1]: *** [debian/rules:39: override_dh_auto_test] Error 2 The full build log is available from: http://qa-logs.debian.net/2023/07/26/nipype_1.8.5-3_unstable.log All bugs filed during this archive rebuild are listed at: https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20230726;users=lu...@debian.org or: https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20230726&fusertaguser=lu...@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! If you reassign this bug to another package, please mark it as 'affects'-ing this package. See https://www.debian.org/Bugs/server-control#affects If you fail to reproduce this, please provide a build log and diff it with mine so that we can identify if something relevant changed in the meantime.
--- End Message ---
--- Begin Message ---Source: nipype Source-Version: 1.8.6-1 Done: Étienne Mollier <emoll...@debian.org> We believe that the bug you reported is fixed in the latest version of nipype, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 1042...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Étienne Mollier <emoll...@debian.org> (supplier of updated nipype package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Fri, 18 Aug 2023 09:29:10 +0200 Source: nipype Architecture: source Version: 1.8.6-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Étienne Mollier <emoll...@debian.org> Closes: 1042133 Changes: nipype (1.8.6-1) unstable; urgency=medium . * New upstream version 1.8.6 (Closes: #1042133) * d/control: remove fsl-core from suggestions. This package has been removed from unstable. * 010*_*.patch: delete: applied upstream. * deb_skip_doctest_pybids patch: refresh. * d/control: add myself to uploaders. * fix-privacy-breaches.patch: new: remove links from documentation. These links are automatically loaded upon reading the documentation, due to being images or stylesheets. * d/t/control: autopkgtest depends on python3-all. Checksums-Sha1: 0d51cd85c86d7470472742b03d2327cbcd40c132 2826 nipype_1.8.6-1.dsc 479b337107d6afa0056fbc0032b809645fce2d72 2921102 nipype_1.8.6.orig.tar.gz 60132e9411355058d716fb1a96b541531340948d 15996 nipype_1.8.6-1.debian.tar.xz Checksums-Sha256: c69773d37270a5971481913aa032c6a57e33be0cba46045c25797db51284c472 2826 nipype_1.8.6-1.dsc 1696fa0fe50db7252bc25e35d001bdcdce2a5afff52c2f3c2d9c88028aea8b5e 2921102 nipype_1.8.6.orig.tar.gz f7cb645c3bcf4fc52fc8d4a6aed14f7d4f3a102ace89ce14bbd536f15b3431f7 15996 nipype_1.8.6-1.debian.tar.xz Files: 24d99266e376fefb340c16585c556f6d 2826 science optional nipype_1.8.6-1.dsc 834445a36078a705c1acf77af223105d 2921102 science optional nipype_1.8.6.orig.tar.gz 00340c48607db341fe241c0807c86865 15996 science optional nipype_1.8.6-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmTfUM0UHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdoqqA//U3sjTILASHjF7IdmmlNvlYHQMsVy lOnehiVpUNebQ4LD6EyNcrgGj4plBh2FzPABivoy5Z60jthGvdS2CaGXdnEd5ERf /gbCKdkHUsJglACo6x6NPedfs5caeQmRt677/e3Ddsq9AbLgxuwGN4bmFy7Jgxu6 wCoM+qKYtnBtiOQWaPCCaeyeH31ANFlRvt7jUGk3lwMsErHPglRyTOyMPYyET8eY sqy68mJDdizcrKu5ONS8069VlCpst3TNlWcOqoSZTdFRRU8lwgZ1HjN/WloIjKSJ ZU6knJ0ehezoJTEhYm2zwKner3GW1jaOZvjDIzxjxdDXVN/Ene/EnCXF4s2LvAJx tZKCYSi2W7QGzJsPHpg3secGZ6fHXOF7BlpisFI+dong24HBpHwq1u/S4b+KvTbF Wf342nzSt1MNfXDHlD5rHvbkrnYn5I7CruKQISu4jvDKu6ZDo3WGhWfGLJXSLo1J ZVCiHDDpM6Iji+PU/O+lSxZdoaWHg9Cnp4z7lEH2K2iuj82hAaZSzUmhDP4rTfAN ZztEcYp0RXENsUfacO8vmTDOHxguvBdawGiHAjtIXLwgtWzWzDDPb8J7C+sGVIVV 6C34Zc56ohbkJGvstQft7Ea+rPjpNdqTuWrFAI6XiP+/z/ljhhh5/svpN7zCkalw 08u/INtFIiYeINk= =bwYU -----END PGP SIGNATURE-----
--- End Message ---
