Your message dated Tue, 15 Aug 2023 16:14:06 +0200
with message-id <znuilkbkh32un...@an3as.eu>
and subject line Re: Bug#1043223: r-cran-biocmanager: autopkgtest needs update
for r-bioc-biocversion
has caused the Debian Bug report #1043223,
regarding r-cran-biocmanager: autopkgtest needs update for r-bioc-biocversion
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1043223: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1043223
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: r-cran-biocmanager
Version: 1.30.21.1+dfsg-1
Severity: serious
User: debian...@lists.debian.org
Usertags: needs-update
Hi Maintainer
Since the upload of r-bioc-biocversion 3.17.1-1, the autopkgtests of
r-cran-biocmanager are failing [1]. I've copied what I hope is the
relevant part of the log below.
Regards
Graham
[1] https://ci.debian.net/packages/r/r-cran-biocmanager/testing/amd64/
38s > test_check("BiocManager")
58s [ FAIL 1 | WARN 1 | SKIP 24 | PASS 84 ]
58s
58s == Skipped tests (24)
==========================================================
59s * On CRAN (23): 'test_install.R:27:5', 'test_install.R:45:5',
59s 'test_install.R:204:5', 'test_repositories.R:5:5',
59s 'test_repositories.R:14:5', 'test_repositories.R:20:5',
59s 'test_repositories.R:26:5', 'test_repositories.R:33:5',
59s 'test_repositories.R:43:5', 'test_repositories.R:118:5',
59s 'test_repositories.R:127:5', 'test_repositories.R:165:5',
59s 'test_version.R:17:5', 'test_version.R:39:5', 'test_version.R:92:5',
59s 'test_version.R:107:5', 'test_version.R:147:5', 'test_version.R:194:5',
59s 'test_version.R:235:5', 'test_version.R:246:5', 'test_version.R:277:5',
59s 'test_version.R:328:5', 'test_version.R:387:5'
59s * too idiosyncratic for standardized testing (1): 'test_install.R:164:5'
59s
59s == Failed tests
================================================================
59s -- Failure ('test_install.R:355:5'): install() without package
names passes ... to install.packages --
59s `object` is not TRUE
59s
59s `actual`: FALSE
59s `expected`: TRUE
59s
59s [ FAIL 1 | WARN 1 | SKIP 24 | PASS 84 ]
--- End Message ---
--- Begin Message ---
Hi Graham,
thanks for the patch. There was a race condition between you filing
the bug and me realising the issue on Salsa-CI. Since the bug is
closed in 1.30.22+dfsg-2 I'm just closing this bug.
Thanks a lot for beeing that fast to spot an issue and providing a patch
Andreas.
--
http://fam-tille.de
--- End Message ---
