Your message dated Sun, 13 Aug 2023 19:13:36 +0000 with message-id <e1qvgwu-000knj...@fasolo.debian.org> and subject line Bug#1037742: fixed in libssw 1.1-14 has caused the Debian Bug report #1037742, regarding libssw: FTBFS: dpkg-gensymbols: error: some symbols or patterns disappeared in the symbols file: see diff output below to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 1037742: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1037742 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: libssw Version: 1.1-13 Severity: serious Justification: FTBFS Tags: trixie sid ftbfs User: lu...@debian.org Usertags: ftbfs-20230726 ftbfs-trixie Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > make[1]: Entering directory '/<<PKGBUILDDIR>>' > LD_LIBRARY_PATH=`pwd`/src help2man --version-string=' ' --help-option=' ' \ > -I debian/extra-man-info.txt \ > -N -n 'fast Smith-Waterman aligner' \ > --no-discard-stderr src/ssw-align \ > | fgrep -v ERROR > debian/ssw-align.1 > dh_installman > make[1]: Leaving directory '/<<PKGBUILDDIR>>' > dh_perl > dh_link > jh_installlibs > jh_classpath > jh_manifest > jh_exec > jh_depends > mh_installpoms > mh_linkjars --skip-clean-poms > dh_strip_nondeterminism > dh_compress > dh_fixperms > dh_missing > dh_dwz -a > dh_strip -a > dh_makeshlibs -a > dpkg-gensymbols: error: some symbols or patterns disappeared in the symbols > file: see diff output below > dpkg-gensymbols: warning: debian/libssw0/DEBIAN/symbols doesn't match > completely debian/libssw0.symbols > --- debian/libssw0.symbols (libssw0_1.1-13_amd64) > +++ dpkg-gensymbolsLQ_iNr 2023-07-26 19:14:10.300342095 +0000 > @@ -22,9 +22,9 @@ > > _ZNK20StripedSmithWaterman7Aligner5AlignEPKcRKNS_6FilterEPNS_9AlignmentE@Base > 1.1 > > _ZNK20StripedSmithWaterman7Aligner5AlignEPKcS2_RKiRKNS_6FilterEPNS_9AlignmentE@Base > 1.1 > > (optional)_ZNSt6vectorIjSaIjEE17_M_realloc_insertIJRKjEEEvN9__gnu_cxx17__normal_iteratorIPjS1_EEDpOT_@Base > 1.1 > - _ZNSt7__cxx1115basic_stringbufIcSt11char_traitsIcESaIcEED0Ev@Base 1.1 > - _ZNSt7__cxx1115basic_stringbufIcSt11char_traitsIcESaIcEED1Ev@Base 1.1 > - _ZNSt7__cxx1115basic_stringbufIcSt11char_traitsIcESaIcEED2Ev@Base 1.1 > +#MISSING: 1.1-13# > _ZNSt7__cxx1115basic_stringbufIcSt11char_traitsIcESaIcEED0Ev@Base 1.1 > +#MISSING: 1.1-13# > _ZNSt7__cxx1115basic_stringbufIcSt11char_traitsIcESaIcEED1Ev@Base 1.1 > +#MISSING: 1.1-13# > _ZNSt7__cxx1115basic_stringbufIcSt11char_traitsIcESaIcEED2Ev@Base 1.1 > align_destroy@Base 1.1 > init_destroy@Base 1.1 > mark_mismatch@Base 1.1 > dh_makeshlibs: error: failing due to earlier errors > make: *** [debian/rules:20: binary] Error 25 The full build log is available from: http://qa-logs.debian.net/2023/07/26/libssw_1.1-13_unstable.log All bugs filed during this archive rebuild are listed at: https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20230726;users=lu...@debian.org or: https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20230726&fusertaguser=lu...@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! If you reassign this bug to another package, please mark it as 'affects'-ing this package. See https://www.debian.org/Bugs/server-control#affects If you fail to reproduce this, please provide a build log and diff it with mine so that we can identify if something relevant changed in the meantime.
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--- Begin Message ---Source: libssw Source-Version: 1.1-14 Done: Michael R. Crusoe <cru...@debian.org> We believe that the bug you reported is fixed in the latest version of libssw, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 1037...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Michael R. Crusoe <cru...@debian.org> (supplier of updated libssw package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Sun, 13 Aug 2023 20:51:28 +0200 Source: libssw Architecture: source Version: 1.1-14 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Michael R. Crusoe <cru...@debian.org> Closes: 1037742 1042114 Changes: libssw (1.1-14) unstable; urgency=medium . * d/libssw0.symbols: update for gcc-13. Closes: #1037742, #1042114 * Standards-Version: 4.6.2 (routine-update) Checksums-Sha1: 20fa4f315c305cf07a404ca5915e319fae6ee0cd 2369 libssw_1.1-14.dsc f78e9eace8abd1c2a9069ba4f8b45da2086742f9 54188 libssw_1.1-14.debian.tar.xz be52e10680e61a020a5a57ee1298398154404f79 14046 libssw_1.1-14_source.buildinfo Checksums-Sha256: c9ec73f0f7282453d26985f6e035b3a884e3643d237dcc8e9b3ea1f48e8944dc 2369 libssw_1.1-14.dsc f90e962a626ab2df8e504ed8f3b54ef41691967ecf3b277244b5fb368431ca1d 54188 libssw_1.1-14.debian.tar.xz 0f83d384fee15d634ff192dbd940b87805a6f609ec6b2d1ba64b422b2df60c34 14046 libssw_1.1-14_source.buildinfo Files: 47f7c90f6a42318962ef16c6c9a52549 2369 science optional libssw_1.1-14.dsc b21dfad07beffb6fa413dac33b560802 54188 science optional libssw_1.1-14.debian.tar.xz b56ed3124a12835e79a12ba8e247fa04 14046 science optional libssw_1.1-14_source.buildinfo -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmTZJlUACgkQPCZ2P2xn 5uKTFw//TE4i9Jy1Bo5d7ZaWTlblFSNAHZ5lScO87laNMw1f9seU7Ii4zgCLHcsi us4OqLAnI/TKsHRCdJ5yeUL6Ws18r6dGico6FOK9OGk9BqfR1evHXiOXmTP6fmEK mztcqQwlh9IQJ233bZKxAYPGfF1tSxbiyGB1nrMjxlJE38ZyvobIXw5P6oHrKPPq 0NIx6glgDlg4wQb/Vvcx95Ptcg75iZgpEwAGTDW4BvNa8LlaKjQHrnxBrENB+VUB NmdCLhl0KYYPpCpvUTtC++L+pekJGjilTjcMf/0rvN27OpbWLPUa1bKPZmSs9U7Q j+E4MYBuKaCDgkjRCpDAOYYSEigUlKtQaSyDAxLTomD1lw811spzTOcGSKHjckXn kobyrTIW3JgOjizFrNlQ60rWxVTtfTaRsNUFmYpz7oZLlQdKeW9eAg8mTz83z/6P nmn0/Mjj5Sjm9+XEvPVKysUuCl6mzWxK4AzHMLA7QGOn9l6hbZLdQv/6KDPiYFLm cbs67x9bTU3/Z9K72xTStOSog8f8RsIL7BZybR8RVajNvBlO0X8LZy+1V4KZwW8M Zut4j3QVCIG9TB4b859J4Ku5OImY1i9ALM044xRddYm+yOnAm9Jbw2wna43ZdMx3 bJwpAYhvgFtjC/VQqEVd0J6lGUoHOrTWTSsu+QD/LFYEYlaEsLs= =VolG -----END PGP SIGNATURE-----
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