Your message dated Thu, 13 Jul 2023 00:48:56 +0000
with message-id <e1qjkvs-008juq...@fasolo.debian.org>
and subject line Bug#1029466: fixed in esda 2.4.3-4
has caused the Debian Bug report #1029466,
regarding esda: FTBFS with current numba version
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1029466: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1029466
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: esda
Version: 0.1.0-1
Severity: serious
The package cannot be built due to the unit tests:
======================================== short test summary info
========================================
FAILED esda/tests/test_getisord.py::G_Local_Tester::test_G_Local_Binary - numba.core.errors.TypingError: Failed in
nopython mode pipeline (step: nopython frontend)
FAILED esda/tests/test_getisord.py::G_Local_Tester::test_G_Local_Row_Standardized - numba.core.errors.TypingError:
Failed in nopython mode pipeline (step: nopython frontend)
FAILED esda/tests/test_getisord.py::G_Local_Tester::test_G_star_Local_Binary - numba.core.errors.TypingError: Failed in
nopython mode pipeline (step: nopython frontend)
FAILED esda/tests/test_getisord.py::G_Local_Tester::test_G_star_Row_Standardized - numba.core.errors.TypingError: Failed
in nopython mode pipeline (step: nopython frontend)
FAILED esda/tests/test_getisord.py::G_Local_Tester::test_by_col - numba.core.errors.TypingError: Failed in nopython mode
pipeline (step: nopython frontend)
FAILED esda/tests/test_getisord.py::i::test_G_Local_Binary - numba.core.errors.TypingError: Failed in nopython mode
pipeline (step: nopython frontend)
FAILED esda/tests/test_getisord.py::i::test_G_Local_Row_Standardized - numba.core.errors.TypingError: Failed in nopython
mode pipeline (step: nopython frontend)
FAILED esda/tests/test_getisord.py::i::test_G_star_Local_Binary - numba.core.errors.TypingError: Failed in nopython mode
pipeline (step: nopython frontend)
FAILED esda/tests/test_getisord.py::i::test_G_star_Row_Standardized - numba.core.errors.TypingError: Failed in nopython
mode pipeline (step: nopython frontend)
FAILED esda/tests/test_getisord.py::i::test_by_col - numba.core.errors.TypingError: Failed in nopython mode pipeline
(step: nopython frontend)
FAILED esda/tests/test_ljc.py::Join_Counts_Locals_Tester::test_Join_Counts_Locals - numba.core.errors.TypingError:
Failed in nopython mode pipeline (step: nopython frontend)
FAILED esda/tests/test_ljc.py::i::test_Join_Counts_Locals - numba.core.errors.TypingError: Failed in nopython mode
pipeline (step: nopython frontend)
FAILED esda/tests/test_ljc_bv.py::Local_Join_Counts_BV_Tester::test_Local_Join_Counts_BV -
numba.core.errors.TypingError: Failed in nopython mode pipeline (step: nopython frontend)
FAILED esda/tests/test_ljc_bv.py::i::test_Local_Join_Counts_BV - numba.core.errors.TypingError: Failed in nopython mode
pipeline (step: nopython frontend)
FAILED esda/tests/test_ljc_mv.py::Local_Join_Counts_MV_Tester::test_Local_Join_Counts_MV -
numba.core.errors.TypingError: Failed in nopython mode pipeline (step: nopython frontend)
FAILED esda/tests/test_ljc_mv.py::i::test_Local_Join_Counts_MV - numba.core.errors.TypingError: Failed in nopython mode
pipeline (step: nopython frontend)
FAILED esda/tests/test_moran.py::Moran_Tester::test_z_consistency - numba.core.errors.TypingError: Failed in nopython
mode pipeline (step: nopython frontend)
FAILED esda/tests/test_moran.py::Moran_Local_Tester::test_Moran_Local - numba.core.errors.TypingError: Failed in
nopython mode pipeline (step: nopython frontend)
FAILED esda/tests/test_moran.py::Moran_Local_Tester::test_Moran_Local_parallel - numba.core.errors.TypingError: Failed
in nopython mode pipeline (step: nopython frontend)
FAILED esda/tests/test_moran.py::Moran_Local_Tester::test_local_moments - numba.core.errors.TypingError: Failed in
nopython mode pipeline (step: nopython frontend)
FAILED esda/tests/test_moran.py::Moran_Local_BV_Tester::test_Moran_Local_BV - numba.core.errors.TypingError: Failed in
nopython mode pipeline (step: nopython frontend)
FAILED esda/tests/test_moran.py::Moran_Local_Rate_Tester::test_moran_rate - numba.core.errors.TypingError: Failed in
nopython mode pipeline (step: nopython frontend)
FAILED esda/tests/test_moran.py::i::test_moran_rate - numba.core.errors.TypingError: Failed in nopython mode pipeline
(step: nopython frontend)
FAILED esda/tests/test_util.py::Fdr_Tester::test_fdr - numba.core.errors.TypingError: Failed in nopython mode pipeline
(step: nopython frontend)
FAILED esda/tests/test_util.py::i::test_fdr - numba.core.errors.TypingError: Failed in nopython mode pipeline (step:
nopython frontend)
======================== 25 failed, 57 passed, 11 skipped, 37 warnings in
13.53s ========================
Most of them end in a stack trace like the following:
E numba.core.errors.TypingError: Failed in nopython mode pipeline
(step: nopython frontend)
E No implementation of function Function(<built-in function seed>)
found for signature:
E
E >>> seed(int64)
E
E There are 4 candidate implementations:
E - Of which 4 did not match due to:
E Overload in function '_OverloadWrapper._build.<locals>.ol_generated': File: numba/core/overload_glue.py:
Line 129.
E With argument(s): '(int64)':
E Rejected as the implementation raised a specific error:
E TypeError: code() argument 13 must be str, not int
E raised from
/usr/lib/python3/dist-packages/numba/core/overload_glue.py:64
E
E During: resolving callee type: Function(<built-in function seed>)
E During: typing of call at
/home/bage/esda-2.4.3/.pybuild/cpython3_3.11_esda/build/esda/crand.py (60)
E
E
E File "esda/crand.py", line 60:
E def vec_permutations(max_card: int, n: int, k_replications: int,
seed: int):
E <source elided>
E """
E np.random.seed(seed)
E ^
--- End Message ---
--- Begin Message ---
Source: esda
Source-Version: 2.4.3-4
Done: Josenilson Ferreira da Silva <nilsonfsi...@hotmail.com>
We believe that the bug you reported is fixed in the latest version of
esda, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1029...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Josenilson Ferreira da Silva <nilsonfsi...@hotmail.com> (supplier of updated
esda package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Wed, 12 Jul 2023 18:53:42 -0300
Source: esda
Architecture: source
Version: 2.4.3-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<debian-science-maintain...@lists.alioth.debian.org>
Changed-By: Josenilson Ferreira da Silva <nilsonfsi...@hotmail.com>
Closes: 1029466 1032409
Changes:
esda (2.4.3-4) unstable; urgency=medium
.
* FTBFS with current numba version. (Closes: #1029466)
* please make the build reproducible. (Closes: #1032409)
* debian/control:
- dependency change from jdupes to fdupes
- update Standards-Version to 4.6.2
* debian/copyright: updated year to 2023
* debian/patches: reproducible build
- The documentation embedded the full build path,
ironically because esda was incorrectly passing
a directory to env.doc2path.
Thanks Chris Lamb <la...@debian.org> Bug report (1032409).
* debian/rules: changing shape remove file duplication
- calls out to jdupes, but this utility cleans up
duplicates depending on the underlying filesystem
order. Thanks Chris Lamb <la...@debian.org>.
Bug report (1032409.
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--- End Message ---
