Your message dated Wed, 24 May 2023 05:19:17 +0000 with message-id <e1q1gu5-00dx2y...@fasolo.debian.org> and subject line Bug#1036639: fixed in openstructure 2.3.1-9 has caused the Debian Bug report #1036639, regarding libost-base2.3: please add Breaks: libost-base2.2 for smoother upgrades from bullseye to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 1036639: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1036639 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Package: libost-base2.3 Version: 2.3.1-8 Severity: serious Tags: patch User: debian...@lists.debian.org Usertags: piuparts Hi, the openstructure library stacks from bullseye and bookworm are not co-installable due to a transitive dependency conflict on libboost-regex1.74.0-icu67 which is a virtual package provided by libboost-regex1.74.0 in bullseye only, while the bookworm version provides libboost-regex1.74.0-icu72. This is hard for apt to figure out correctly and on some upgrade paths apt prefers to keep the obsolete library stack installed instead of replacng it with the new one. Adding a Breaks to the base package which is at the top of the dependency tree helps apt making the right choice: removing the old library stack s.t. it can upgrade libboost-regex1.74.0. Please consider applying the attached patch. Andreas>From 69fc50fdf3bdc26ed5152a7d6ec3c264e279c143 Mon Sep 17 00:00:00 2001 From: Andreas Beckmann <a...@debian.org> Date: Tue, 23 May 2023 18:38:19 +0200 Subject: [PATCH] libost-base2.3: add Breaks: libost-base2.2 for smoother upgrades from bullseye --- debian/changelog | 7 +++++++ debian/control | 2 ++ 2 files changed, 9 insertions(+) diff --git a/debian/changelog b/debian/changelog index eda78fd..e6970ac 100644 --- a/debian/changelog +++ b/debian/changelog @@ -1,3 +1,10 @@ +openstructure (2.3.1-9) UNRELEASED; urgency=medium + + * libost-base2.3: Add Breaks: libost-base2.2 for smoother upgrades from + bullseye. (Closes: #) + + -- Andreas Beckmann <a...@debian.org> Tue, 23 May 2023 18:37:03 +0200 + openstructure (2.3.1-8) unstable; urgency=medium * Install shlibs into multiarch locations using debian/rules. diff --git a/debian/control b/debian/control index f7340ea..310d73b 100644 --- a/debian/control +++ b/debian/control @@ -41,6 +41,8 @@ Section: libs Depends: ${misc:Depends}, ${shlibs:Depends}, +Breaks: + libost-base2.2, Description: Open-Source Computational Structural Biology Framework OpenStructure aims to provide an open-source, modular, flexible, molecular modelling and visualization environment. It is targeted at interested method -- 2.20.1
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--- Begin Message ---Source: openstructure Source-Version: 2.3.1-9 Done: Andrius Merkys <mer...@debian.org> We believe that the bug you reported is fixed in the latest version of openstructure, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 1036...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andrius Merkys <mer...@debian.org> (supplier of updated openstructure package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Wed, 24 May 2023 00:56:53 -0400 Source: openstructure Architecture: source Version: 2.3.1-9 Distribution: unstable Urgency: medium Maintainer: Debichem Team <debichem-de...@lists.alioth.debian.org> Changed-By: Andrius Merkys <mer...@debian.org> Closes: 1036639 Changes: openstructure (2.3.1-9) unstable; urgency=medium . * libost-base2.3: Add Breaks: libost-base2.2 for smoother upgrades from bullseye. (Closes: #1036639) Checksums-Sha1: 56ea064655ffee58ee35d56619d519e5a713859e 4617 openstructure_2.3.1-9.dsc 21a29136bba759745d17a40f1553d46227a9d652 84062732 openstructure_2.3.1-9.debian.tar.xz bcb39ffaf8b2c367fced6210e4990b711172a483 14404 openstructure_2.3.1-9_source.buildinfo Checksums-Sha256: 29da90df6746dae26bd183ffdf4c92e277eadb39fd1df84465bd8612d9a5239b 4617 openstructure_2.3.1-9.dsc 833f305194c546155c25da8f9502e36e01e64ee0c61a2c7bb0cdc5e7e1b36214 84062732 openstructure_2.3.1-9.debian.tar.xz 3f3b2b2d9cb3b1987de183b4c870fa2f5c3959f5aa84eeede4f1591900940c61 14404 openstructure_2.3.1-9_source.buildinfo Files: 2ec27d178a4ee1c3c31ac73285650577 4617 science optional openstructure_2.3.1-9.dsc 084250628c50ea532edca3fee43f148a 84062732 science optional openstructure_2.3.1-9.debian.tar.xz d8a64f8f992f2c44825854d87c20a65f 14404 science optional openstructure_2.3.1-9_source.buildinfo -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEdyKS9veshfrgQdQe5fQ/nCc08ocFAmRtmckSHG1lcmt5c0Bk ZWJpYW4ub3JnAAoJEOX0P5wnNPKHxHoP/0Xrnq7F1CeEyKpPoTrkY89I+s3EBGcW u2gIPDdQjJ19qrgbNDAe2daxuL0LmTLAEO/pJvVUhc3HmfaXd5jUV1XTHUK1SS8r LAssd0DN2fCWWADqxruhVWTbsj7p5Bc5Y/KFCdJ3hXcPtkTwgjVbKddBXam3i09P WAPN6rmO7gJP+5oIOVZ1YrKdPrnJ4Ik+Tw+wjlzonGuyKhjmEMH/evJ6BXFz1gpy i1zbyi+AhjjpJpr/SRzCMh8zrnYBIDn7Jcq3kj3CUIKIT2yZibGuewh9VmJ9BlGM 9FVLI4JoKlEzmJ8fNI0eBW5KOE94uELH+Urv4WuJetGLR/yq8WZcqQsyozPmSN26 aSbYEIPW8/bU7aAJhIKkF7lQKKRwxzsM4+pwbUaUJqn336y+UjH4gFo03Vd9TD73 EoDrRdBEPkP6cllICfruVZrleh0MhnqJiTc8/GBe6OHTHjOD5UlTAlxA83QtjEAx iZCId3gL6m8b2TCKTR5pMNXeVvEubVAcoGGjxHXOMIs+1HjzdXGhlFwaIQITGxIH fdkbVwwvqsS7zJMVFe8R2TXBimeWIa3Y6CCs98kafVNyphAoy+ebNMoEiYT1l6Ha m/kv+AJZq+6sLfaUQAFX6KdrBPwrasGMVtbfbnFYVXX57UnF1L5RcWfiH8BY/pAh 6SUDHbgCLK5v =7Z2g -----END PGP SIGNATURE-----
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