Your message dated Tue, 31 Jan 2023 22:51:27 +0000 with message-id <e1pmztl-0041zz...@fasolo.debian.org> and subject line Bug#1030138: fixed in nipy 0.5.0-7 has caused the Debian Bug report #1030138, regarding nipy: FTBFS in unstable to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 1030138: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1030138 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: nipy Version: 0.5.0-6 Severity: serious Tags: ftbfs Hi Maintainer While rebuilding nipy for the removal of Python 3.10, it FTBFS [1]. I've copied what I hope is the relevant part of the log below. Regards Graham [1] https://buildd.debian.org/status/package.php?p=nipy ====================================================================== ERROR: Failure: ModuleNotFoundError (No module named 'nibabel.py3k') ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python3/dist-packages/nose/failure.py", line 39, in runTest raise self.exc_val.with_traceback(self.tb) File "/usr/lib/python3/dist-packages/nose/loader.py", line 416, in loadTestsFromName module = self.importer.importFromPath( ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/nose/importer.py", line 47, in importFromPath return self.importFromDir(dir_path, fqname) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/nose/importer.py", line 94, in importFromDir mod = load_module(part_fqname, fh, filename, desc) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3.11/imp.py", line 235, in load_module return load_source(name, filename, file) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3.11/imp.py", line 172, in load_source module = _load(spec) ^^^^^^^^^^^ File "<frozen importlib._bootstrap>", line 721, in _load File "<frozen importlib._bootstrap>", line 690, in _load_unlocked File "<frozen importlib._bootstrap_external>", line 940, in exec_module File "<frozen importlib._bootstrap>", line 241, in _call_with_frames_removed File "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_nipy/build/nipy/algorithms/statistics/formula/tests/test_formula.py", line 21, in <module> from nibabel.py3k import asbytes ModuleNotFoundError: No module named 'nibabel.py3k' ====================================================================== ERROR: nipy.core.image.tests.test_image_spaces.test_image_xyz_affine ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python3/dist-packages/nose/case.py", line 197, in runTest self.test(*self.arg) File "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_nipy/build/nipy/core/image/tests/test_image_spaces.py", line 37, in test_image_xyz_affine nimg = nib.Nifti1Image(arr, aff) ^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/nibabel/nifti1.py", line 1838, in __init__ alert_future_error( File "/usr/lib/python3/dist-packages/nibabel/deprecated.py", line 118, in alert_future_error raise error_class(f'{msg} {error_rec}'.strip()) ValueError: Image data has type int64, which may cause incompatibilities with other tools. To use this type, pass an explicit header or dtype argument to Nifti1Image().
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--- Begin Message ---Source: nipy Source-Version: 0.5.0-7 Done: Étienne Mollier <emoll...@debian.org> We believe that the bug you reported is fixed in the latest version of nipy, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 1030...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Étienne Mollier <emoll...@debian.org> (supplier of updated nipy package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Tue, 31 Jan 2023 22:51:15 +0100 Source: nipy Architecture: source Version: 0.5.0-7 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Étienne Mollier <emoll...@debian.org> Closes: 1030138 Changes: nipy (0.5.0-7) unstable; urgency=medium . * Team upload. * d/control: build depends on python3-pytest. * nibabel5.0.0.patch: add; fix unit test failure with nibabel 5. (Closes: #1030138) Checksums-Sha1: 117143c82916e36efe958cfd5b80f870afff8df4 2583 nipy_0.5.0-7.dsc eb58294fe1448d26e818241290600d2bd1580048 14780 nipy_0.5.0-7.debian.tar.xz Checksums-Sha256: 78e4bd85483722966eae3ecffa4523f7f7a9298806872baa0109b41bd97d97cf 2583 nipy_0.5.0-7.dsc 60bf940a2bb45e3edc11f39736a0735d7251706ab7736e72e5f1586cc603667b 14780 nipy_0.5.0-7.debian.tar.xz Files: e3d646660611c5a42107b2c97065fe17 2583 python optional nipy_0.5.0-7.dsc 02714aac750f19c8853b8b84b4cf32ce 14780 python optional nipy_0.5.0-7.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmPZlVEUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdpFiA//ZVPg1Wl7764LC9By1jiYdp+dgqYw AuMAs1aCFwCnFxss3vWKtxxRIbHl5GVaDf+aoR4DIBHIVGEJHVlK+WSatX275Gbx CXUKLXpbUR89DhQM5HmEwl91QAt/e0dOFOCmoPbG+EAhmhuv7xNtdILsdiMPrGGd P4XONHzWSftI0cn5RBCWE6+VfAkLJQBqv63uGe7FbsAW66wxOoo3ECk33tlIOHU4 ybXxAFW8GENiW4a0Og4e40XEHDpq9Lwk1HH4YytCbcMZuulfnTiw2cJ9Om8YZ7a/ cP4SWgkz4DUfmhccKpFwlGHK/RICAkSl2o3jmMTU2t2JAfEH6uRzBf75NV+ReYmv SHSSvsHIH/hLHLuQQ7goO8Zb/liCFA+Iek/VXoUUd9fePg7nnTbHud1lanfEMR4y FZu50MQiDxhP3uHJlg8A1ywrb89nTwHNibCCjoliu2OPW+8QOHBjsbV5+b82IPRw ViDyrHi9IZgtevB44qV79K9QcoyqA+v77/mou/KoH2RqasdaSxSRITviDZlWuaOT bHEA/SQPDaghl+CInp4KwOvJGejR9EqPSPhTN3sD+40YTYaJ/SApFeISBxKNO+dr SJSAM8koCI8GX02nLKTyRN5o07ba3RYkP6Qp3tWDOmZambJjOttFFOcURVYx5Z6e MT8x3PslW65Iy7s= =46Ir -----END PGP SIGNATURE-----
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