Source: unifrac Version: 1.2-2 Severity: serious Tags: ftbfs Justification: fails to build from source (but built successfully in the past)
https://buildd.debian.org/status/fetch.php?pkg=unifrac&arch=amd64&ver=1.2-2%2Bb1&stamp=1675069851&raw=0 I: pybuild base:240: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_unifrac/build; python3.11 -m unittest discover -v unifrac (unittest.loader._FailedTest.unifrac) ... ERROR ====================================================================== ERROR: unifrac (unittest.loader._FailedTest.unifrac) ---------------------------------------------------------------------- ImportError: Failed to import test module: unifrac Traceback (most recent call last): File "/usr/lib/python3.11/unittest/loader.py", line 440, in _find_test_path package = self._get_module_from_name(name) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3.11/unittest/loader.py", line 350, in _get_module_from_name __import__(name) File "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_unifrac/build/unifrac/__init__.py", line 11, in <module> from unifrac._methods import (unweighted, File "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_unifrac/build/unifrac/_methods.py", line 15, in <module> import skbio File "/usr/lib/python3/dist-packages/skbio/__init__.py", line 11, in <module> import skbio.io # noqa ^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/skbio/io/__init__.py", line 248, in <module> import_module('skbio.io.format.lsmat') File "/usr/lib/python3.11/importlib/__init__.py", line 126, in import_module return _bootstrap._gcd_import(name[level:], package, level) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/skbio/io/format/lsmat.py", line 77, in <module> from skbio.stats.distance import DissimilarityMatrix, DistanceMatrix File "/usr/lib/python3/dist-packages/skbio/stats/distance/__init__.py", line 197, in <module> from ._mantel import mantel, pwmantel File "/usr/lib/python3/dist-packages/skbio/stats/distance/_mantel.py", line 16, in <module> from scipy.stats import PearsonRConstantInputWarning ImportError: cannot import name 'PearsonRConstantInputWarning' from 'scipy.stats' (/usr/lib/python3/dist-packages/scipy/stats/__init__.py) ---------------------------------------------------------------------- Ran 1 test in 0.001s FAILED (errors=1) E: pybuild pybuild:388: test: plugin distutils failed with: exit code=1: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_unifrac/build; python3.11 -m unittest discover -v dh_auto_test: error: pybuild --test -i python{version} -p 3.11 returned exit code 13 make: *** [debian/rules:8: binary-arch] Error 25 Cheers -- Sebastian Ramacher
