Your message dated Sat, 28 Jan 2023 02:41:48 +0000
with message-id <e1plba4-000fnm...@fasolo.debian.org>
and subject line Bug#1025183: fixed in silx 1.1.0+dfsg-4
has caused the Debian Bug report #1025183,
regarding silx: (autopkgtest) needs update for python3.11: Segmentation fault
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1025183: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1025183
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: silx
Version: 1.1.0+dfsg-3
Severity: serious
Tags: sid bookworm
User: debian...@lists.debian.org
Usertags: needs-update
User: debian-pyt...@lists.debian.org
Usertags: python3.11
Control: affects -1 src:python3-defaults
Dear maintainer(s),
We are in the transition of adding python3.11 as a supported Python
version [0]. With a recent upload of python3-defaults the autopkgtest of
silx fails in testing when that autopkgtest is run with the binary
packages of python3-defaults from unstable. It passes when run with only
packages from testing. In tabular form:
pass fail
python3-defaults from testing 3.10.6-3
silx from testing 1.1.0+dfsg-3
all others from testing from testing
I copied some of the output at the bottom of this report.
Currently this regression is blocking the migration of python3-defaults
to testing [1]. https://docs.python.org/3/whatsnew/3.11.html lists
what's new in Python3.11, it may help to identify what needs to be updated.
More information about this bug and the reason for filing it can be found on
https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation
Paul
[0] https://bugs.debian.org/1021984
[1] https://qa.debian.org/excuses.php?package=python3-defaults
https://ci.debian.net/data/autopkgtest/testing/amd64/s/silx/28796438/log.gz
Testing with python3.11:
============================= test session starts
==============================
platform linux -- Python 3.11.0+, pytest-7.1.2, pluggy-1.0.0+repack
rootdir: /tmp/autopkgtest-lxc.btdfxoen/downtmp/autopkgtest_tmp
plugins: xvfb-2.0.0
collected 1796 items
app/test/test_convert.py ....
[ 0%]
app/view/test/test_launcher.py .....
[ 0%]
app/view/test/test_view.py FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
[ 2%]
gui/data/test/test_arraywidget.py sFFFFFFFFFFFFFFF
[ 3%]
gui/data/test/test_dataviewer.py FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
[ 5%]
FFF
[ 5%]
gui/data/test/test_numpyaxesselector.py FFFFFFFFF
[ 6%]
gui/data/test/test_textformatter.py FFFFFFFFFFFFFFFFFFFF
[ 7%]
gui/dialog/test/test_colormapdialog.py
FEFEFEFEFEFEFEFEFEFEFEFEFEFEFEFEFE [ 8%]
FEFE
[ 8%]
gui/dialog/test/test_datafiledialog.py FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
[ 10%]
FF
[ 10%]
gui/dialog/test/test_imagefiledialog.py FFFFFFFFFFFFFatal Python error:
Segmentation fault
Current thread 0x00007fb29d541040 (most recent call first):
File "/usr/lib/python3/dist-packages/silx/gui/utils/testutils.py",
line 334 in qWait
File "/usr/lib/python3/dist-packages/silx/gui/utils/testutils.py",
line 393 in qWaitForDestroy
File
"/usr/lib/python3/dist-packages/silx/gui/dialog/test/test_imagefiledialog.py",
line 124 in _deleteDialog
File
"/usr/lib/python3/dist-packages/silx/gui/dialog/test/test_imagefiledialog.py",
line 151 in tearDown
File "/usr/lib/python3.11/unittest/case.py", line 584 in _callTearDown
File "/usr/lib/python3.11/unittest/case.py", line 626 in run
File "/usr/lib/python3.11/unittest/case.py", line 678 in __call__
File "/usr/lib/python3/dist-packages/_pytest/unittest.py", line 327
in runtest
File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 166 in
pytest_runtest_call
File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 39 in
_multicall
File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 80 in
_hookexec
File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 265 in
__call__
File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 259 in
<lambda>
File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 338 in
from_call
File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 258 in
call_runtest_hook
File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 219 in
call_and_report
File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 130 in
runtestprotocol
File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 111 in
pytest_runtest_protocol
File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 39 in
_multicall
File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 80 in
_hookexec
File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 265 in
__call__
File "/usr/lib/python3/dist-packages/_pytest/main.py", line 347 in
pytest_runtestloop
File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 39 in
_multicall
File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 80 in
_hookexec
File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 265 in
__call__
File "/usr/lib/python3/dist-packages/_pytest/main.py", line 322 in _main
File "/usr/lib/python3/dist-packages/_pytest/main.py", line 268 in
wrap_session
File "/usr/lib/python3/dist-packages/_pytest/main.py", line 315 in
pytest_cmdline_main
File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 39 in
_multicall
File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 80 in
_hookexec
File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 265 in
__call__
File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py",
line 164 in main
File "/usr/lib/python3/dist-packages/silx/test/__init__.py", line 44
in run_tests
File "<string>", line 1 in <module>
Extension modules: numpy.core._multiarray_umath,
numpy.core._multiarray_tests, numpy.linalg.lapack_lite,
numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal,
numpy.random._common, numpy.random.bit_generator,
numpy.random._bounded_integers, numpy.random._mt19937,
numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64,
numpy.random._sfc64, numpy.random._generator,
h5py._debian_h5py_serial._errors, h5py._debian_h5py_serial.defs,
h5py._debian_h5py_serial._objects, h5py._debian_h5py_serial.h5,
h5py._debian_h5py_serial.h5r, h5py._debian_h5py_serial.utils,
h5py._debian_h5py_serial.h5s, h5py._debian_h5py_serial.h5ac,
h5py._debian_h5py_serial.h5p, h5py._debian_h5py_serial.h5t,
h5py._debian_h5py_serial._conv, h5py._debian_h5py_serial.h5z,
h5py._debian_h5py_serial._proxy, h5py._debian_h5py_serial.h5a,
h5py._debian_h5py_serial.h5d, h5py._debian_h5py_serial.h5ds,
h5py._debian_h5py_serial.h5g, h5py._debian_h5py_serial.h5i,
h5py._debian_h5py_serial.h5f, h5py._debian_h5py_serial.h5fd,
h5py._debian_h5py_serial.h5pl, h5py._debian_h5py_serial.h5o,
h5py._debian_h5py_serial.h5l, h5py._debian_h5py_serial._selector,
h5py.atexit, h5py._errors, h5py.defs, h5py._objects, h5py.h5, h5py.h5r,
h5py.utils, h5py.h5s, h5py.h5ac, h5py.h5p, h5py.h5t, h5py._conv,
h5py.h5z, h5py._proxy, h5py.h5a, h5py.h5d, h5py.h5ds, h5py.h5g,
h5py.h5i, h5py.h5f, h5py.h5fd, h5py.h5pl, h5py.h5o, h5py.h5l,
h5py._selector, silx.io.specfile, PIL._imaging, fabio.ext._cif,
lxml._elementpath, lxml.etree, fabio.ext._agi_bitfield, fabio.ext.dense,
PyQt5.QtCore, PyQt5.QtGui, PyQt5.QtWidgets, PyQt5.QtPrintSupport,
PyQt5.QtOpenGL, PyQt5.QtSvg, silx.math.chistogramnd,
silx.math.chistogramnd_lut, silx.math.medianfilter.medianfilter,
silx.math.combo, silx.math._colormap, matplotlib._c_internal_utils,
matplotlib._path, kiwisolver, matplotlib._image, silx.image.shapes,
silx.image.bilinear, zmq.backend.cython.context,
zmq.backend.cython.message, zmq.backend.cython.socket,
zmq.backend.cython._device, zmq.backend.cython._poll,
zmq.backend.cython._proxy_steerable, zmq.backend.cython._version,
zmq.backend.cython.error, zmq.backend.cython.utils, tornado.speedups,
PyQt5.QtTest, silx.image.marchingsquares._mergeimpl,
silx.math.fit.functions, silx.math.fit.filters, silx.math.fit.peaks,
scipy._lib._ccallback_c, scipy.ndimage._nd_image,
scipy.special._ufuncs_cxx, scipy.special._ufuncs,
scipy.special._specfun, scipy.linalg._fblas, scipy.linalg._flapack,
scipy.linalg._cythonized_array_utils, scipy.linalg._flinalg,
scipy.linalg._solve_toeplitz, scipy.linalg._matfuncs_sqrtm_triu,
scipy.linalg.cython_blas, scipy.linalg.cython_lapack,
scipy.linalg._decomp_update, scipy.sparse._sparsetools,
scipy.sparse._csparsetools, scipy.sparse.csgraph._tools,
scipy.sparse.csgraph._shortest_path, scipy.sparse.csgraph._traversal,
scipy.sparse.csgraph._min_spanning_tree, scipy.sparse.csgraph._flow,
scipy.sparse.csgraph._matching, scipy.sparse.csgraph._reordering,
scipy.special._comb, scipy.special._ellip_harm_2, _ni_label,
scipy.ndimage._ni_label, scipy.interpolate._fitpack,
scipy.interpolate.dfitpack, scipy.interpolate._bspl,
scipy.interpolate._ppoly, scipy.spatial._ckdtree,
scipy._lib.messagestream, scipy.spatial._qhull, scipy.spatial._voronoi,
scipy.spatial._distance_wrap, scipy.spatial._hausdorff,
scipy.spatial.transform._rotation, scipy.interpolate.interpnd,
scipy.interpolate._rbfinterp_pythran, silx.math.interpolate,
silx.math.marchingcubes, markupsafe._speedups (total: 145)
Segmentation fault
autopkgtest [01:18:56]: test command1
OpenPGP_signature
Description: OpenPGP digital signature
--- End Message ---
--- Begin Message ---
Source: silx
Source-Version: 1.1.0+dfsg-4
Done: Stefano Rivera <stefa...@debian.org>
We believe that the bug you reported is fixed in the latest version of
silx, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1025...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Stefano Rivera <stefa...@debian.org> (supplier of updated silx package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Fri, 27 Jan 2023 21:20:42 -0400
Source: silx
Architecture: source
Version: 1.1.0+dfsg-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<debian-science-maintain...@lists.alioth.debian.org>
Changed-By: Stefano Rivera <stefa...@debian.org>
Closes: 1025183
Changes:
silx (1.1.0+dfsg-4) unstable; urgency=medium
.
* Team upload.
* Add a patch fixing the build with Python 3.11, thanks Simon Quigley.
(Closes: #1025183)
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