Source: cyarray
Version: 1.1-4
Severity: serious
Justification: FTBFS
Tags: bookworm sid ftbfs
User: lu...@debian.org
Usertags: ftbfs-20230113 ftbfs-bookworm
Hi,
During a rebuild of all packages in sid, your package failed to build
on amd64.
Relevant part (hopefully):
> debian/rules binary
> dh binary --with python3 --buildsystem=pybuild
> dh_update_autotools_config -O--buildsystem=pybuild
> dh_autoreconf -O--buildsystem=pybuild
> dh_auto_configure -O--buildsystem=pybuild
> I: pybuild base:240: python3.10 setup.py config
> /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning:
> Cython directive 'language_level' not set, using 2 for now (Py2). This will
> change in a later release! File: /<<PKGBUILDDIR>>/cyarray/carray.pxd
> tree = Parsing.p_module(s, pxd, full_module_name)
> Compiling cyarray/carray.pyx because it changed.
> [1/1] Cythonizing cyarray/carray.pyx
> running config
> I: pybuild base:240: python3.11 setup.py config
> running config
> dh_auto_build -O--buildsystem=pybuild
> I: pybuild base:240: /usr/bin/python3.10 setup.py build
> running build
> running build_py
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cyarray/build/cyarray
> copying cyarray/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cyarray/build/cyarray
> copying cyarray/api.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cyarray/build/cyarray
> copying cyarray/generator.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cyarray/build/cyarray
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cyarray/build/cyarray/tests
> copying cyarray/tests/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cyarray/build/cyarray/tests
> copying cyarray/tests/test_carray.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cyarray/build/cyarray/tests
> running egg_info
> creating cyarray.egg-info
> writing cyarray.egg-info/PKG-INFO
> writing dependency_links to cyarray.egg-info/dependency_links.txt
> writing requirements to cyarray.egg-info/requires.txt
> writing top-level names to cyarray.egg-info/top_level.txt
> writing manifest file 'cyarray.egg-info/SOURCES.txt'
> reading manifest file 'cyarray.egg-info/SOURCES.txt'
> reading manifest template 'MANIFEST.in'
> warning: no files found matching 'Makefile'
> warning: no files found matching '*.toml'
> adding license file 'LICENSE.txt'
> writing manifest file 'cyarray.egg-info/SOURCES.txt'
> copying cyarray/carray.pxd ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cyarray/build/cyarray
> copying cyarray/carray.pxd.mako ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cyarray/build/cyarray
> copying cyarray/carray.pyx.mako ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cyarray/build/cyarray
> copying cyarray/msstdint.h ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cyarray/build/cyarray
> running build_ext
> building 'cyarray.carray' extension
> creating build
> creating build/temp.linux-x86_64-cpython-310
> creating build/temp.linux-x86_64-cpython-310/cyarray
> x86_64-linux-gnu-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv
> -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g
> -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=.
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -fPIC -Icyarray
> -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10
> -c cyarray/carray.cpp -o build/temp.linux-x86_64-cpython-310/cyarray/carray.o
> In file included from
> /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940,
> from
> /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
> from
> /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
> from cyarray/carray.cpp:785:
> /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2:
> warning: #warning "Using deprecated NumPy API, disable it with " "#define
> NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
> 17 | #warning "Using deprecated NumPy API, disable it with " \
> | ^~~~~~~
> x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2
> -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=.
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-310/cyarray/carray.o
> -L/usr/lib/x86_64-linux-gnu -o
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cyarray/build/cyarray/carray.cpython-310-x86_64-linux-gnu.so
> I: pybuild base:240: /usr/bin/python3 setup.py build
> running build
> running build_py
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cyarray/build/cyarray
> copying cyarray/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cyarray/build/cyarray
> copying cyarray/api.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cyarray/build/cyarray
> copying cyarray/generator.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cyarray/build/cyarray
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cyarray/build/cyarray/tests
> copying cyarray/tests/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cyarray/build/cyarray/tests
> copying cyarray/tests/test_carray.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cyarray/build/cyarray/tests
> running egg_info
> writing cyarray.egg-info/PKG-INFO
> writing dependency_links to cyarray.egg-info/dependency_links.txt
> writing requirements to cyarray.egg-info/requires.txt
> writing top-level names to cyarray.egg-info/top_level.txt
> reading manifest file 'cyarray.egg-info/SOURCES.txt'
> reading manifest template 'MANIFEST.in'
> warning: no files found matching 'Makefile'
> warning: no files found matching '*.toml'
> adding license file 'LICENSE.txt'
> writing manifest file 'cyarray.egg-info/SOURCES.txt'
> copying cyarray/carray.pxd ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cyarray/build/cyarray
> copying cyarray/carray.pxd.mako ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cyarray/build/cyarray
> copying cyarray/carray.pyx.mako ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cyarray/build/cyarray
> copying cyarray/msstdint.h ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cyarray/build/cyarray
> running build_ext
> building 'cyarray.carray' extension
> creating build/temp.linux-x86_64-cpython-311
> creating build/temp.linux-x86_64-cpython-311/cyarray
> x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g
> -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g
> -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat
> -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icyarray
> -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11
> -c cyarray/carray.cpp -o build/temp.linux-x86_64-cpython-311/cyarray/carray.o
> In file included from
> /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940,
> from
> /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
> from
> /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
> from cyarray/carray.cpp:785:
> /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2:
> warning: #warning "Using deprecated NumPy API, disable it with " "#define
> NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
> 17 | #warning "Using deprecated NumPy API, disable it with " \
> | ^~~~~~~
> x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2
> -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=.
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/cyarray/carray.o
> -L/usr/lib/x86_64-linux-gnu -o
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cyarray/build/cyarray/carray.cpython-311-x86_64-linux-gnu.so
> dh_auto_test -O--buildsystem=pybuild
> I: pybuild base:240: cd
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cyarray/build; python3.10 -m pytest
> ============================= test session starts
> ==============================
> platform linux -- Python 3.10.9, pytest-7.2.0, pluggy-1.0.0+repack
> rootdir: /<<PKGBUILDDIR>>
> collected 26 items
>
> cyarray/tests/test_carray.py ............FF............
> [100%]
>
> =================================== FAILURES
> ===================================
> __________________________ TestLongArray.test_remove
> ___________________________
>
> self = <cyarray.tests.test_carray.TestLongArray testMethod=test_remove>
>
> def test_remove(self):
> l1 = LongArray(10)
> l1.set_data(numpy.arange(10))
> rem = [0, 4, 3]
> > l1.remove(numpy.array(rem, dtype=numpy.int))
>
> cyarray/tests/test_carray.py:227:
> _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
> _
>
> attr = 'int'
>
> def __getattr__(attr):
> # Warn for expired attributes, and return a dummy function
> # that always raises an exception.
> import warnings
> try:
> msg = __expired_functions__[attr]
> except KeyError:
> pass
> else:
> warnings.warn(msg, DeprecationWarning, stacklevel=2)
>
> def _expired(*args, **kwds):
> raise RuntimeError(msg)
>
> return _expired
>
> # Emit warnings for deprecated attributes
> try:
> val, msg = __deprecated_attrs__[attr]
> except KeyError:
> pass
> else:
> warnings.warn(msg, DeprecationWarning, stacklevel=2)
> return val
>
> if attr in __future_scalars__:
> # And future warnings for those that will change, but also give
> # the AttributeError
> warnings.warn(
> f"In the future `np.{attr}` will be defined as the "
> "corresponding NumPy scalar. (This may have returned Python "
> "scalars in past versions.", FutureWarning, stacklevel=2)
>
> # Importing Tester requires importing all of UnitTest which is not a
> # cheap import Since it is mainly used in test suits, we lazy import
> it
> # here to save on the order of 10 ms of import time for most users
> #
> # The previous way Tester was imported also had a side effect of
> adding
> # the full `numpy.testing` namespace
> if attr == 'testing':
> import numpy.testing as testing
> return testing
> elif attr == 'Tester':
> from .testing import Tester
> return Tester
>
> > raise AttributeError("module {!r} has no attribute "
> "{!r}".format(__name__, attr))
> E AttributeError: module 'numpy' has no attribute 'int'. Did you mean:
> 'inf'?
>
> /usr/lib/python3/dist-packages/numpy/__init__.py:284: AttributeError
> ____________________ TestLongArray.test_remove_with_strides
> ____________________
>
> self = <cyarray.tests.test_carray.TestLongArray
> testMethod=test_remove_with_strides>
>
> def test_remove_with_strides(self):
> # Given
> l1 = LongArray(12)
> l1.set_data(numpy.arange(12))
>
> # When
> rem = [3, 1]
> > l1.remove(numpy.array(rem, dtype=numpy.int), stride=3)
>
> cyarray/tests/test_carray.py:253:
> _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
> _
>
> attr = 'int'
>
> def __getattr__(attr):
> # Warn for expired attributes, and return a dummy function
> # that always raises an exception.
> import warnings
> try:
> msg = __expired_functions__[attr]
> except KeyError:
> pass
> else:
> warnings.warn(msg, DeprecationWarning, stacklevel=2)
>
> def _expired(*args, **kwds):
> raise RuntimeError(msg)
>
> return _expired
>
> # Emit warnings for deprecated attributes
> try:
> val, msg = __deprecated_attrs__[attr]
> except KeyError:
> pass
> else:
> warnings.warn(msg, DeprecationWarning, stacklevel=2)
> return val
>
> if attr in __future_scalars__:
> # And future warnings for those that will change, but also give
> # the AttributeError
> warnings.warn(
> f"In the future `np.{attr}` will be defined as the "
> "corresponding NumPy scalar. (This may have returned Python "
> "scalars in past versions.", FutureWarning, stacklevel=2)
>
> # Importing Tester requires importing all of UnitTest which is not a
> # cheap import Since it is mainly used in test suits, we lazy import
> it
> # here to save on the order of 10 ms of import time for most users
> #
> # The previous way Tester was imported also had a side effect of
> adding
> # the full `numpy.testing` namespace
> if attr == 'testing':
> import numpy.testing as testing
> return testing
> elif attr == 'Tester':
> from .testing import Tester
> return Tester
>
> > raise AttributeError("module {!r} has no attribute "
> "{!r}".format(__name__, attr))
> E AttributeError: module 'numpy' has no attribute 'int'. Did you mean:
> 'inf'?
>
> /usr/lib/python3/dist-packages/numpy/__init__.py:284: AttributeError
> =========================== short test summary info
> ============================
> FAILED cyarray/tests/test_carray.py::TestLongArray::test_remove -
> AttributeEr...
> FAILED cyarray/tests/test_carray.py::TestLongArray::test_remove_with_strides
> ========================= 2 failed, 24 passed in 0.16s
> =========================
> E: pybuild pybuild:388: test: plugin distutils failed with: exit code=1: cd
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cyarray/build; python3.10 -m pytest
> I: pybuild base:240: cd
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cyarray/build; python3.11 -m pytest
> ============================= test session starts
> ==============================
> platform linux -- Python 3.11.1, pytest-7.2.0, pluggy-1.0.0+repack
> rootdir: /<<PKGBUILDDIR>>
> collected 26 items
>
> cyarray/tests/test_carray.py ............FF............
> [100%]
>
> =================================== FAILURES
> ===================================
> __________________________ TestLongArray.test_remove
> ___________________________
>
> self = <cyarray.tests.test_carray.TestLongArray testMethod=test_remove>
>
> def test_remove(self):
> l1 = LongArray(10)
> l1.set_data(numpy.arange(10))
> rem = [0, 4, 3]
> > l1.remove(numpy.array(rem, dtype=numpy.int))
>
> cyarray/tests/test_carray.py:227:
> _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
> _
>
> attr = 'int'
>
> def __getattr__(attr):
> # Warn for expired attributes, and return a dummy function
> # that always raises an exception.
> import warnings
> try:
> msg = __expired_functions__[attr]
> except KeyError:
> pass
> else:
> warnings.warn(msg, DeprecationWarning, stacklevel=2)
>
> def _expired(*args, **kwds):
> raise RuntimeError(msg)
>
> return _expired
>
> # Emit warnings for deprecated attributes
> try:
> val, msg = __deprecated_attrs__[attr]
> except KeyError:
> pass
> else:
> warnings.warn(msg, DeprecationWarning, stacklevel=2)
> return val
>
> if attr in __future_scalars__:
> # And future warnings for those that will change, but also give
> # the AttributeError
> warnings.warn(
> f"In the future `np.{attr}` will be defined as the "
> "corresponding NumPy scalar. (This may have returned Python "
> "scalars in past versions.", FutureWarning, stacklevel=2)
>
> # Importing Tester requires importing all of UnitTest which is not a
> # cheap import Since it is mainly used in test suits, we lazy import
> it
> # here to save on the order of 10 ms of import time for most users
> #
> # The previous way Tester was imported also had a side effect of
> adding
> # the full `numpy.testing` namespace
> if attr == 'testing':
> import numpy.testing as testing
> return testing
> elif attr == 'Tester':
> from .testing import Tester
> return Tester
>
> > raise AttributeError("module {!r} has no attribute "
> "{!r}".format(__name__, attr))
> E AttributeError: module 'numpy' has no attribute 'int'
>
> /usr/lib/python3/dist-packages/numpy/__init__.py:284: AttributeError
> ____________________ TestLongArray.test_remove_with_strides
> ____________________
>
> self = <cyarray.tests.test_carray.TestLongArray
> testMethod=test_remove_with_strides>
>
> def test_remove_with_strides(self):
> # Given
> l1 = LongArray(12)
> l1.set_data(numpy.arange(12))
>
> # When
> rem = [3, 1]
> > l1.remove(numpy.array(rem, dtype=numpy.int), stride=3)
>
> cyarray/tests/test_carray.py:253:
> _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
> _
>
> attr = 'int'
>
> def __getattr__(attr):
> # Warn for expired attributes, and return a dummy function
> # that always raises an exception.
> import warnings
> try:
> msg = __expired_functions__[attr]
> except KeyError:
> pass
> else:
> warnings.warn(msg, DeprecationWarning, stacklevel=2)
>
> def _expired(*args, **kwds):
> raise RuntimeError(msg)
>
> return _expired
>
> # Emit warnings for deprecated attributes
> try:
> val, msg = __deprecated_attrs__[attr]
> except KeyError:
> pass
> else:
> warnings.warn(msg, DeprecationWarning, stacklevel=2)
> return val
>
> if attr in __future_scalars__:
> # And future warnings for those that will change, but also give
> # the AttributeError
> warnings.warn(
> f"In the future `np.{attr}` will be defined as the "
> "corresponding NumPy scalar. (This may have returned Python "
> "scalars in past versions.", FutureWarning, stacklevel=2)
>
> # Importing Tester requires importing all of UnitTest which is not a
> # cheap import Since it is mainly used in test suits, we lazy import
> it
> # here to save on the order of 10 ms of import time for most users
> #
> # The previous way Tester was imported also had a side effect of
> adding
> # the full `numpy.testing` namespace
> if attr == 'testing':
> import numpy.testing as testing
> return testing
> elif attr == 'Tester':
> from .testing import Tester
> return Tester
>
> > raise AttributeError("module {!r} has no attribute "
> "{!r}".format(__name__, attr))
> E AttributeError: module 'numpy' has no attribute 'int'
>
> /usr/lib/python3/dist-packages/numpy/__init__.py:284: AttributeError
> =========================== short test summary info
> ============================
> FAILED cyarray/tests/test_carray.py::TestLongArray::test_remove -
> AttributeEr...
> FAILED cyarray/tests/test_carray.py::TestLongArray::test_remove_with_strides
> ========================= 2 failed, 24 passed in 0.15s
> =========================
> E: pybuild pybuild:388: test: plugin distutils failed with: exit code=1: cd
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cyarray/build; python3.11 -m pytest
> dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.10
> 3.11" returned exit code 13
The full build log is available from:
http://qa-logs.debian.net/2023/01/13/cyarray_1.1-4_unstable.log
All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20230113;users=lu...@debian.org
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20230113&fusertaguser=lu...@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
