control: forwarded -1 https://github.com/seqan/needle/issues/128
They are different programs, with different interfaces, alas. So a workaround will be needed: probably we should rename the binary `seqan-needle` and provide a directory with a regular `needle` that can be added to a user's `PATH`. On Wed, Nov 16, 2022 at 4:26 PM Andreas Tille <andr...@an3as.eu> wrote: > Hi Michael, > > Am Thu, Nov 10, 2022 at 01:34:32PM +0100 schrieb Andreas Beckmann: > > Package: seqan-needle > > Version: 1.0.1.0.0.git.3011926+ds-1 > > Severity: serious > > > > There is already a (unrelated?) /usr/bin/needle binary in the Debian > > archive, provided by the emboss package. > > Do you think this "needle" (which is an unfortunate name in both > packages) is a drop in replacement for needle inside emboss or > is it something else? > > Kind regards > Andreas. > > -- > http://fam-tille.de > -- Michael R. Crusoe ; he/him https://orcid.org/0000-0002-2961-9670 CWL Project Leader, Software Freedom Conservancy, Common Workflow Language project Promovendus, VU Amsterdam, Computer Systems & Bioinformatics Project Leader Compute Platform in ELIXIR-NL, DTL Projects ELIXIR-DE Communication Officer, Research Center Jülich
