Your message dated Sun, 02 Oct 2022 14:44:06 +0000
with message-id <e1of0cm-00fkzq...@fasolo.debian.org>
and subject line Bug#1021115: fixed in unifrac-tools 1.1.1-3
has caused the Debian Bug report #1021115,
regarding unifrac-tools: Baseline violation on x86 and FTBFS everywhere else
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
1021115: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1021115
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: unifrac-tools
Version: 1.1.1-1
Severity: serious
Tags: ftbfs
X-Debbugs-Cc: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>, Étienne Mollier
<emoll...@debian.org>
https://buildd.debian.org/status/fetch.php?pkg=unifrac-tools&arch=armel&ver=1.1.1-1&stamp=1664713094&raw=0
...
h5c++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -mfma -march=native -Wextra
-Wno-unused-parameter -Wall -std=c++11 -pedantic -I. -O4 -fPIC
-L/<<PKGBUILDDIR>>/debian/tmp/usr/lib -c tree.cpp -o tree.o
arm-linux-gnueabi-g++: error: unrecognized command-line option ‘-mfma’
...
https://buildd.debian.org/status/fetch.php?pkg=unifrac-tools&arch=amd64&ver=1.1.1-2&stamp=1664716667&raw=0
...
h5c++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -mfma -march=native -Wextra
-Wno-unused-parameter -Wall -std=c++11 -pedantic -I. -O4 -fPIC
-L/<<PKGBUILDDIR>>/debian/tmp/usr/lib -c tree.cpp -o tree.o
...
src/Makefile:
...
ifeq ($(PERFORMING_CONDA_BUILD),True)
CPPFLAGS += -mtune=generic
else
CPPFLAGS += -mfma -march=native
endif
...
Please remove this block, it is a baseline violation on x86
and causes FTBFS everywhere else.
Please don't use the PERFORMING_CONDA_BUILD case instead:
-mtune=generic is already the Debian default on x86,
but it is not supported on some/all(?) other architectures.
--- End Message ---
--- Begin Message ---
Source: unifrac-tools
Source-Version: 1.1.1-3
Done: Étienne Mollier <emoll...@debian.org>
We believe that the bug you reported is fixed in the latest version of
unifrac-tools, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1021...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Étienne Mollier <emoll...@debian.org> (supplier of updated unifrac-tools
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Sun, 02 Oct 2022 15:31:39 +0200
Source: unifrac-tools
Architecture: source
Version: 1.1.1-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Étienne Mollier <emoll...@debian.org>
Closes: 1021115
Changes:
unifrac-tools (1.1.1-3) unstable; urgency=medium
.
* baseline.patch: fix baseline violation and ftbfs on non-amd64.
(Closes: #1021115)
Checksums-Sha1:
721e05321b94fe6748c1651ade686e10a3a53371 2281 unifrac-tools_1.1.1-3.dsc
34efa430fe51dbe97944e339aeeb9491b9d450d8 7236
unifrac-tools_1.1.1-3.debian.tar.xz
e0f9f3635ac90904b25f36ef617df566d50baad9 8759
unifrac-tools_1.1.1-3_amd64.buildinfo
Checksums-Sha256:
beb7d0ddbaff153030b3e3e2ec5768d3cef83659e9d997ae4bdf50d33285c15a 2281
unifrac-tools_1.1.1-3.dsc
f23db4f1a11aeae8f0bf6c5a81adc11f7734a6430c706b3687c2b18c991d2088 7236
unifrac-tools_1.1.1-3.debian.tar.xz
0f5cc57bc23f95d832be0436aac419b1abd60e481a20e97e64dd63cb4704e406 8759
unifrac-tools_1.1.1-3_amd64.buildinfo
Files:
cbfecf7a66a32705ddec3b7a7719be11 2281 science optional
unifrac-tools_1.1.1-3.dsc
a28c6dd12fa4abe23c7656841c6a2dd9 7236 science optional
unifrac-tools_1.1.1-3.debian.tar.xz
88ee5c90ce56b9ec9366fa06c4b1e134 8759 science optional
unifrac-tools_1.1.1-3_amd64.buildinfo
-----BEGIN PGP SIGNATURE-----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=91Uz
-----END PGP SIGNATURE-----
--- End Message ---