Your message dated Fri, 30 Sep 2022 09:49:09 +0000 with message-id <e1oecdp-002tzs...@fasolo.debian.org> and subject line Bug#1014797: fixed in gbrowse 2.56+dfsg-11 has caused the Debian Bug report #1014797, regarding FTBFS: test failures with new libgd3 to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 1014797: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1014797 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: gbrowse Version: 2.56+dfsg-10 Severity: serious Tags: ftbfs Justification: fails to build from source (but built successfully in the past) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 While working on libgd-perl and libgd-graph-perl (#1014741) I noticed that gbrowse has issues with the new lbgd(3) as well: On ci.debian.net we have e.g. https://ci.debian.net/data/autopkgtest/testing/amd64/g/gbrowse/23582883/log.gz Test Summary Report - ------------------- t/05.deferredrendering.t (Wstat: 6400 Tests: 15 Failed: 6) Failed tests: 5, 7, 9, 11, 13-14 Non-zero exit status: 25 Parse errors: Bad plan. You planned 19 tests but ran 15. Files=6, Tests=222, 17 wallclock secs ( 0.03 usr 0.01 sys + 4.67 cusr 0.79 csys = 5.50 CPU) Result: FAIL During a local rebuild, even more tests fail: Test Summary Report - ------------------- t/03.render.t (Wstat: 6400 Tests: 48 Failed: 0) Non-zero exit status: 25 Parse errors: Bad plan. You planned 150 tests but ran 48. t/04.remoteserver.t (Wstat: 0 Tests: 39 Failed: 10) Failed tests: 8, 11, 14, 20, 23, 26, 32, 35, 38-39 Parse errors: Bad plan. You planned 43 tests but ran 39. t/05.deferredrendering.t (Wstat: 6400 Tests: 15 Failed: 6) Failed tests: 5, 7, 9, 11, 13-14 Non-zero exit status: 25 Parse errors: Bad plan. You planned 19 tests but ran 15. Files=10, Tests=338, 33 wallclock secs ( 0.08 usr 0.03 sys + 14.09 cusr 1.71 csys = 15.91 CPU) Result: FAIL In my limited understanding, error like GD Warning: GD2 image support has been disabled gdImageGd2Ptr error at /usr/lib/x86_64-linux-gnu/perl/5.34/Storable.pm line 285, at /build/gbrowse-2.56+dfsg/t/../lib/Bio/Graphics/Browser2/CachedTrack.pm line 158. come from the removal of some formats in libgd(3). Cheers, gregor -----BEGIN PGP SIGNATURE----- iQKTBAEBCgB9FiEE0eExbpOnYKgQTYX6uzpoAYZJqgYFAmLNMWBfFIAAAAAALgAo aXNzdWVyLWZwckBub3RhdGlvbnMub3BlbnBncC5maWZ0aGhvcnNlbWFuLm5ldEQx RTEzMTZFOTNBNzYwQTgxMDREODVGQUJCM0E2ODAxODY0OUFBMDYACgkQuzpoAYZJ qgZ+MRAAqCv4lC4CwC55QB4vGWqQTrvarhaXnGUFmJDxgyTRTI0rTpV8emBTNbhO n6ruxd/Y47kIcys6V4JXlfQORAiKBNe680k1kK0I+nSU11/udtHllElxFc9Lk6ng VTTtdNk6QQgtJUiHlNGkvGsEw3p6738ARJDcCeYD2nLYQRsgAG8m15lMP/DDVd1z 3CLC7Z7fER7CLbPdruLbuSMO9k5aq/BwfhRMJLHD6ieft3cWPjudOHy02PoyyP3d nFbWWnski5Go46RtVH4wWmCKHwjw/VmjxQ3Dk8cxhrWJjX2GMrwXyYb+iYFkOES2 VfPDEGnq1hH33rbib0mIFMuKc3hmyRsC4ncgrOySZz0Gl/MS/wIhnlozJYUNCO91 6wMjQvUYXs+0GuD4msJDtDxZaEkJo0uT8NzlhnJ4z8KioslyEY0vhwXdnptaDso7 96XM+tdS/+uibtjwMUe0lX32kMgM0X9NxCxeCE4yKIIXo8FnOhASahj4oYQz6VPZ J3M3nvu/G5PTwOPW/m8GkMe1iMXWBgQhKFDjY4e+qQZToNTot7lDvsuYPBfxcnRV SlxSUgAE+EDKtUpqrOWD9C/7dgR1sBmBtACYMzDhMtKbIptrXEjXBvOdZQ54yA2C Rwo8kus9L08fqQalrs1QZXkkNEPVLPAvkI4x8/lr8jz3HYL4zT8= =VAVx -----END PGP SIGNATURE-----
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--- Begin Message ---Source: gbrowse Source-Version: 2.56+dfsg-11 Done: Olivier Sallou <osal...@debian.org> We believe that the bug you reported is fixed in the latest version of gbrowse, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 1014...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Olivier Sallou <osal...@debian.org> (supplier of updated gbrowse package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Fri, 30 Sep 2022 09:26:00 +0000 Source: gbrowse Architecture: source Version: 2.56+dfsg-11 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Closes: 1014797 Changes: gbrowse (2.56+dfsg-11) unstable; urgency=medium . * Remove gd2 deprecated calls and use png for images (tests and build are fine but could not test rendering) Closes: #1014797. Checksums-Sha1: 0c7841a4f093c1fe827e0f0c0744f1cdd4ad495a 2678 gbrowse_2.56+dfsg-11.dsc 5dccadba9b0255f0acf3422ee8c514f4653cc09c 24100 gbrowse_2.56+dfsg-11.debian.tar.xz 02022e48e51333964d1ee378b0b75a2110ab1586 10141 gbrowse_2.56+dfsg-11_source.buildinfo Checksums-Sha256: 6a5edebf1b0184912093a467eeab5c8242d885161ba01f6e1c604549cd16e8b8 2678 gbrowse_2.56+dfsg-11.dsc 33a0a44b0829bf057982fefe860c809e49df9ed90d14ce5a3674773a78c73ed4 24100 gbrowse_2.56+dfsg-11.debian.tar.xz a257ed3eda9807ba1a3a1a758d122a94e2072dc6ad4643cc808c614149e36918 10141 gbrowse_2.56+dfsg-11_source.buildinfo Files: 811ba76a61c7ffbfbecec7eff390af70 2678 science optional gbrowse_2.56+dfsg-11.dsc b000cf1dc82adce16582be6c6095a905 24100 science optional gbrowse_2.56+dfsg-11.debian.tar.xz 0118e3896f94a4d6e05f7b8608b31384 10141 science optional gbrowse_2.56+dfsg-11_source.buildinfo -----BEGIN PGP SIGNATURE----- iQJHBAEBCAAxFiEEX7Rvg9O5UgRjNdJteNxo2zJthDgFAmM2t2oTHG9zYWxsb3VA ZGViaWFuLm9yZwAKCRB43GjbMm2EOIe6D/9Rip6vCMgTXDYIDCrzedgC5OMi+XwI k8XbKY/exdiC4ecX8NWTzvZytLcinr1FXNVmwkse377sKBNiH5jqGTae8mubTpkR JsKh6JsPAnAiM/1MXTIokcXBjh46YNV2Cvv3dS0s/Mm0jDA2OmYmRiBVkptEkpXf SqzFMW1sRZe+eIsRd5xLXjnLop0HRFKvQlZ4cC5cBiTbuBOricPdPzWsCSzaOx3G XGKrUf6ZGwveuOSF7ujKFiGdR3SBFPr0c+2kpyjNZtcp1BuPoBxWkyUsCtHVNuFD cg9glxiiwx1NI6S6As8rkNcTWOOkPEXRHlCJKwBZfzhylrqHGa8wJZZzdccAydSX cmGEcIO3vo+xfjajqFl5HQlwdrTSZDEFeLwJwFgbnbYEsDV/8+uE6YkbwU0s9b4+ fr24HdNKaOgwDzNM2/Dsx41ZzAXoNMRDi3w/SCSSOmpya9WSUK8kitgVIX75VfDw /TgKJSi3k/TGN6XqLkeU2C5s/klqjS3iYaei19/OFxnuDafPNKxYDmk9ITfveTCP s5ULXhWdJB4k6Y/CPpydWnC6zZfB4UPo++LupdZo6kg+0kH4xhQEJzJZdgP3gAXV L4++QuFbA+qRr0Bz+GmtjyfACEMda+Ubra1mK4V2pm+sDv5eqvjR1anjMGYbx+uu mwLcyHWBe6nAoQ== =CUTk -----END PGP SIGNATURE-----
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