Your message dated Tue, 09 Aug 2022 16:04:19 +0000
with message-id <e1olrin-00eiqe...@fasolo.debian.org>
and subject line Bug#1016324: fixed in cctbx 2021.12+ds1-8
has caused the Debian Bug report #1016324,
regarding cctbx: FTBFS: dpkg-buildpackage: error: dpkg-source -b . subprocess
returned exit status 2
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
1016324: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1016324
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: cctbx
Version: 2021.12+ds1-7
Severity: serious
Justification: FTBFS
Tags: bookworm sid ftbfs
User: lu...@debian.org
Usertags: ftbfs-20220728 ftbfs-bookworm
Hi,
During a rebuild of all packages in sid, your package failed to build
on amd64.
Relevant part (hopefully):
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> cp -f debian/setup.py setup.py
> dh_auto_clean
> install -d
> /<<BUILDDIR>>/cctbx-2021.12\+ds1/debian/.debhelper/generated/_source/home
> pybuild --clean -i python{version} -p 3.10
> I: pybuild base:239: python3.10 setup.py clean
> running clean
> removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build' (and everything
> under it)
> 'build/bdist.linux-x86_64' does not exist -- can't clean it
> 'build/scripts-3.10' does not exist -- can't clean it
> rm -rf .pybuild/
> find . -name \*.pyc -exec rm {} \;
> find . -name __pycache__ -type d -exec rm -rf {} \;
> make[1]: Leaving directory '/<<PKGBUILDDIR>>'
> dh_autoreconf_clean -O--buildsystem=pybuild
> dh_clean -O--buildsystem=pybuild
> rm -f debian/debhelper-build-stamp
> rm -rf debian/.debhelper/
> rm -f -- debian/libcctbx0.substvars debian/libcctbx-dev.substvars
> debian/python3-cctbx.substvars debian/files
> rm -fr -- debian/libcctbx0/ debian/tmp/ debian/libcctbx-dev/
> debian/python3-cctbx/
> find . \( \( \
> \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path
> .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o
> -type f -a \
> \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
> -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
> -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
> -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
> \) -exec rm -f {} + \) -o \
> \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \)
> \)
> dpkg-source -b .
> dpkg-source: info: using source format '3.0 (quilt)'
> dpkg-source: info: building cctbx using existing
> ./cctbx_2021.12+ds1.orig.tar.xz
> dpkg-source: info: using patch list from debian/patches/series
> dpkg-source: warning: ignoring deletion of file dox/Doxyfile.orig, use
> --include-removal to override
> dpkg-source: info: local changes detected, the modified files are:
> cctbx-2021.12+ds1/setup.py
> dpkg-source: error: aborting due to unexpected upstream changes, see
> /tmp/cctbx_2021.12+ds1-7.diff.gtdz0R
> dpkg-source: info: Hint: make sure the version in debian/changelog matches
> the unpacked source tree
> dpkg-source: info: you can integrate the local changes with dpkg-source
> --commit
> dpkg-buildpackage: error: dpkg-source -b . subprocess returned exit status 2
> --------------------------------------------------------------------------------
> Build finished at 2022-07-29T09:09:11Z
The full build log is available from:
http://qa-logs.debian.net/2022/07/28/cctbx_2021.12+ds1-7_unstable.log
All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20220728;users=lu...@debian.org
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20220728&fusertaguser=lu...@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
If you reassign this bug to another package, please marking it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
--- End Message ---
--- Begin Message ---
Source: cctbx
Source-Version: 2021.12+ds1-8
Done: Picca Frédéric-Emmanuel <pi...@debian.org>
We believe that the bug you reported is fixed in the latest version of
cctbx, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1016...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Picca Frédéric-Emmanuel <pi...@debian.org> (supplier of updated cctbx package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Tue, 09 Aug 2022 17:44:07 +0200
Source: cctbx
Architecture: source
Version: 2021.12+ds1-8
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<debian-science-maintain...@lists.alioth.debian.org>
Changed-By: Picca Frédéric-Emmanuel <pi...@debian.org>
Closes: 1016324 1016499
Changes:
cctbx (2021.12+ds1-8) unstable; urgency=medium
.
* More modules activated
- annlib_adaptbx
- ccp4io
- ccp4io_adaptbx
- fable
- mmtbx
* Added missing Python extensions
- iotbx_cif_ext
- iotbx_mtz_ext
* d/t/control: start autopkgtest from an empty directory
* d/rules: activated --enable_cxx11
* d/rules: install libtbx_env under /usr/lib/cctbx/pythonX.Y
* Bug fix: "FTBFS: dpkg-buildpackage: error: dpkg-source -b . subprocess
returned exit status 2", thanks to Lucas Nussbaum (Closes: #1016324).
* Bug fix: "autopkgtest failure: Please run this program in an empty
directory.", thanks to Paul Gevers (Closes: #1016499).
Checksums-Sha1:
334b9270565fa71cf1ac0aa5f6061d50119725c3 3038 cctbx_2021.12+ds1-8.dsc
ce7f4e65ab94289db5b879ebaf46defc96bd244c 269488
cctbx_2021.12+ds1-8.debian.tar.xz
Checksums-Sha256:
13f2f5b52efd34c086ae3b3fd76a24951d3c26044e63fdaffca622fcad59c15c 3038
cctbx_2021.12+ds1-8.dsc
bdae4cb2674776d7593e21add4942254d372c9bdb30425b5f7ad22b81ebbc767 269488
cctbx_2021.12+ds1-8.debian.tar.xz
Files:
b87f3c7cfe5409974b8a502784dbe6bf 3038 science optional cctbx_2021.12+ds1-8.dsc
95595dd1520b15afc07139eb8b241b6f 269488 science optional
cctbx_2021.12+ds1-8.debian.tar.xz
-----BEGIN PGP SIGNATURE-----
iQJFBAEBCgAvFiEE2bRTt5m4gw2UXmoKW/VOXhK5ALsFAmLygd8RHHBpY2NhQGRl
Ymlhbi5vcmcACgkQW/VOXhK5ALv8Ow/+Imp4NHwO5iBg8WH0SA8OR42kqh62+hyn
QtxUurGiTJBVR7QRCrN/z4jyWTK3piPlGl2OSFyz2y9tP8MgAxkbJ2z6WOWwVO8g
kvSFVyRdXlrY6pN5mt5T8eDAjwzSxDqFSw3aovmETWxhW3l9VZ5eO7iYvE20VvYI
+1Y6m8z/oEjsRmsTZkHrSHLl+3y+8QAkhwQtMWDTuBDv9NI625WoQYAGbbkVn57o
ewxdc+jjvLwbVEVcGUbTYqpDY0qQHPIC2Y/VljYzkaxKkf5HA10+8sns5WX04b5C
kFEjFGh10y+vq472McQNWGo1tlqxs5bqw8D44tiQiqOV0+xwigIIAp6rl5rkWaTm
e3+oP0X7qnEE9Lm58VrJROlMwd39ELOB/aVlWlYOsLjmjzW++ZVNYU80Kc7z8D9u
gzmAoIpgX3enfZhw9ovftZrTSNzyCzekeYeX5lzuj52YlDh+IQuBIpRiioDy11XH
apmr48A+Abj/BUwXb3GctxYSFaVmqhxHrWCyM1pbaIepmJxoux4zrcP+tJjQkCYU
H2X9SQyrCw3/6SSQuECfpNzy0mbzl+1N1Ly9xJxaaQgT1DWm5LGYQT2bhX3sxR0w
01q+m6+TWdPFXX5s/7J2Smoe8y078dvbpOad/C09SoZ/0CYTONXtp8TE0vUjE+YA
7izkia/DOnA=
=x88V
-----END PGP SIGNATURE-----
--- End Message ---
