Your message dated Sat, 06 Aug 2022 15:21:15 +0000
with message-id <e1oklc3-00g1yr...@fasolo.debian.org>
and subject line Bug#1016454: fixed in megadepth 1.2.0-4
has caused the Debian Bug report #1016454,
regarding megadepth: autopkgtest failure on s390x: segmentation fault
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1016454: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1016454
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: megadepth
Version: 1.2.0-3
Severity: serious
User: debian...@lists.debian.org
Usertags: fails-always
Dear maintainer(s),
You recently added an autopkgtest to your package megadepth, great.
However, it fails on s390x. Currently this failure is blocking the
migration to testing [1]. Can you please investigate the situation and
fix it?
I copied some of the output at the bottom of this report.
More information about this bug and the reason for filing it can be found on
https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation
Paul
[1] https://qa.debian.org/excuses.php?package=megadepth
https://ci.debian.net/data/autopkgtest/testing/s390x/m/megadepth/23583699/log.gz
[93m[1mRunning Tests[0m
[93m[1mTest 1[0m
building whole annotation region map done
2 chromosomes for annotated regions read
0 chromosomes for annotated regions read, collapsed
total number of annotations in collapsed: 0
Processing BAM: "tests/test_noprefix.bam"
/tmp/autopkgtest-lxc.gmfzuwos/downtmp/build.jJn/src/debian/tests/run-unit-test:
line 33: 1590 Segmentation fault megadepth tests/test_noprefix.bam
--prefix test.bam --threads 4 --bigwig --auc --min-unique-qual 10
--annotation tests/test_exons.bed --frag-dist --alts --include-softclip
--only-polya --read-ends --test-polya --no-annotation-stdout
--no-auc-stdout --filter-out 260 --add-chr-prefix human
autopkgtest [04:42:40]: test run-unit-test
OpenPGP_signature
Description: OpenPGP digital signature
--- End Message ---
--- Begin Message ---
Source: megadepth
Source-Version: 1.2.0-4
Done: Mohammed Bilal <mdbi...@disroot.org>
We believe that the bug you reported is fixed in the latest version of
megadepth, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1016...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Mohammed Bilal <mdbi...@disroot.org> (supplier of updated megadepth package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Sat, 06 Aug 2022 18:13:55 +0530
Source: megadepth
Architecture: source
Version: 1.2.0-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Mohammed Bilal <mdbi...@disroot.org>
Closes: 1016454
Changes:
megadepth (1.2.0-4) unstable; urgency=medium
.
* Team upload.
* d/t/control : disable tests on s390 (Closes: #1016454)
Checksums-Sha1:
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megadepth_1.2.0-4.debian.tar.xz
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--- End Message ---
