Your message dated Mon, 18 Jul 2022 19:22:08 +0000
with message-id <e1odwjk-00052y...@fasolo.debian.org>
and subject line Bug#1013275: fixed in toil 5.6.0-7
has caused the Debian Bug report #1013275,
regarding toil: FTBFS with Python 3.10 only
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1013275: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1013275
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: toil
Version: 5.6.0-6
Severity: important
Tags: ftbfs
Hi Maintainer
Toil hardcodes python3.9 and will FTBFS when Python 3.10 is the only
supported Python version. I've copied what I hope is the relevant
part of the log below, which shows the python3.10 tests being
attempted with python3.9.
Regards
Graham
=================================== FAILURES ===================================
___________________ ToilDebugFileTest.testFetchJobStoreFiles ___________________
Traceback (most recent call last):
File "/<<PKGBUILDDIR>>/src/toil/test/utils/toilDebugTest.py", line
31, in setUp
subprocess.check_call([python,
os.path.abspath('src/toil/test/utils/ABCWorkflowDebug/debugWorkflow.py')])
File "/usr/lib/python3.10/subprocess.py", line 364, in check_call
retcode = call(*popenargs, **kwargs)
File "/usr/lib/python3.10/subprocess.py", line 345, in call
with Popen(*popenargs, **kwargs) as p:
File "/usr/lib/python3.10/subprocess.py", line 966, in __init__
self._execute_child(args, executable, preexec_fn, close_fds,
File "/usr/lib/python3.10/subprocess.py", line 1842, in _execute_child
raise child_exception_type(errno_num, err_msg, err_filename)
FileNotFoundError: [Errno 2] No such file or directory: 'python3.9'
--- End Message ---
--- Begin Message ---
Source: toil
Source-Version: 5.6.0-7
Done: Andreas Tille <ti...@debian.org>
We believe that the bug you reported is fixed in the latest version of
toil, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1013...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated toil package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Mon, 18 Jul 2022 17:39:37 +0200
Source: toil
Architecture: source
Version: 5.6.0-7
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Andreas Tille <ti...@debian.org>
Closes: 1013275
Changes:
toil (5.6.0-7) unstable; urgency=medium
.
* Team upload.
* Packaging update
* Standards-Version: 4.6.1 (routine-update)
* Remove trailing whitespace in debian/changelog (routine-update)
* Drop unnecessary dependency on build-essential.
* Make sure the doc applies to Debian installations with Python3
* Update lintian-overrides
* Set python3.10 instead of python3.9 in setting_version.patch
Closes: #1013275
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