Your message dated Fri, 08 Apr 2022 17:48:48 +0000
with message-id <e1ncsj2-0002e6...@fasolo.debian.org>
and subject line Bug#1008755: fixed in optlang 1.5.2-1
has caused the Debian Bug report #1008755,
regarding optlang/interface.py unusable with python3.10
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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--
1008755: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1008755
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: optlang
Version: 1.4.4-2
Severity: serious
Tags: patch upstream
Justification: RT
Dear Fellow Maintainer,
While addressing failure to build from source in libsbml, I
noticed that python-cobra, one of its reverse dependencies,
had autopkgtest regressions: its test suite failed to run,
raising the following error:
self = <optlang.glpk_interface.Model object at 0x7f0b21f934c0>, stuff =
[]
sloppy = False
def add(self, stuff, sloppy=False):
"""Add variables and constraints.
Parameters
----------
stuff : iterable, Variable, Constraint
Either an iterable containing variables and constraints or
a single variable or constraint.
sloppy : bool
Check constraints for variables that are not part of the
model yet.
Returns
-------
None
"""
if self._pending_modifications.toggle == 'remove':
self.update()
self._pending_modifications.toggle = 'add'
> if isinstance(stuff, collections.Iterable):
E AttributeError: module 'collections' has no attribute 'Iterable'
/usr/lib/python3/dist-packages/optlang/interface.py:1358: AttributeError
The full log is available on ci.debian.net[1]. This turned out
to be caused by optlang. Using the patch in attachment, I
worked around the issue, and autopkgtest of python-cobra went
back on tracks on my side.
[1]:
https://ci.debian.net/data/autopkgtest/testing/amd64/p/python-cobra/20469873/log.gz
Thanks for maintaining optlang!
Have a nice day, :)
--
Étienne Mollier <emoll...@emlwks999.eu>
Fingerprint: 8f91 b227 c7d6 f2b1 948c 8236 793c f67e 8f0d 11da
Sent from /dev/pts/11, please excuse my verbosity.
On air: It Bites - The Last Escape
Description: call collections.abc.Iterables instead of collections.Iterables
This allows the module to operate properly when using python3.10.
Author: Étienne Mollier <emoll...@debian.org>
Forwarded: no
Last-Update: 2022-03-31
---
This patch header follows DEP-3: http://dep.debian.net/deps/dep3/
--- optlang-1.4.4.orig/optlang/interface.py
+++ optlang-1.4.4/optlang/interface.py
@@ -1355,7 +1355,7 @@
if self._pending_modifications.toggle == 'remove':
self.update()
self._pending_modifications.toggle = 'add'
- if isinstance(stuff, collections.Iterable):
+ if isinstance(stuff, collections.abc.Iterable):
for elem in stuff:
self.add(elem, sloppy=sloppy)
elif isinstance(stuff, Variable):
@@ -1404,7 +1404,7 @@
self._pending_modifications.rm_var.append(stuff)
elif isinstance(stuff, Constraint):
self._pending_modifications.rm_constr.append(stuff)
- elif isinstance(stuff, collections.Iterable):
+ elif isinstance(stuff, collections.abc.Iterable):
for elem in stuff:
self.remove(elem)
elif isinstance(stuff, Objective):
signature.asc
Description: PGP signature
--- End Message ---
--- Begin Message ---
Source: optlang
Source-Version: 1.5.2-1
Done: Étienne Mollier <emoll...@debian.org>
We believe that the bug you reported is fixed in the latest version of
optlang, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1008...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Étienne Mollier <emoll...@debian.org> (supplier of updated optlang package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Fri, 08 Apr 2022 19:23:13 +0200
Source: optlang
Architecture: source
Version: 1.5.2-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<debian-science-maintain...@lists.alioth.debian.org>
Changed-By: Étienne Mollier <emoll...@debian.org>
Closes: 1008755
Changes:
optlang (1.5.2-1) unstable; urgency=medium
.
* Team upload.
* New upstream version (Closes: #1008755)
* Standards-Version: 4.6.0 (routine-update)
* debhelper-compat 13 (routine-update)
* Reorder sequence of d/control fields by cme (routine-update)
* Testsuite: autopkgtest-pkg-python (routine-update)
* Add salsa-ci file (routine-update)
* Rules-Requires-Root: no (routine-update)
* Use secure URI in Homepage field.
* Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
Repository-Browse.
* Make d/python3-optlang.examples a regular file to fix build issues where
the initial link to d/examples is erroneously recognized as an executable.
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b7627f5665ebedcb9f0fdcbda51efaab6b8515a7 2476 optlang_1.5.2-1.debian.tar.xz
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Checksums-Sha256:
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Files:
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