Your message dated Fri, 08 Apr 2022 10:19:29 +0000
with message-id <e1nclid-000hod...@fasolo.debian.org>
and subject line Bug#1009110: fixed in pysurfer 0.11.0-3
has caused the Debian Bug report #1009110,
regarding pysurfer: (autopkgtest) needs update for python3.10: cannot import
name 'Sequence' from 'collections'
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1009110: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1009110
Debian Bug Tracking System
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--- Begin Message ---
Source: pysurfer
Version: 0.11.0-2
Severity: serious
Tags: sid bookworm
User: debian...@lists.debian.org
Usertags: needs-update
User: debian-pyt...@lists.debian.org
Usertags: python3.10
Control: affects -1 src:python3-defaults
Dear maintainer(s),
We are in the transition of making python3.10 the default Python
versions [0]. With a recent upload of python3-defaults the autopkgtest
of pysurfer fails in testing when that autopkgtest is run with the
binary packages of python3-defaults from unstable. It passes when run
with only packages from testing. In tabular form:
pass fail
python3-defaults from testing 3.10.4-1
pysurfer from testing 0.11.0-2
all others from testing from testing
I copied some of the output at the bottom of this report.
Currently this regression is blocking the migration of python3-defaults
to testing [1]. https://docs.python.org/3/whatsnew/3.10.html lists
what's new in Python3.10, it may help to identify what needs to be
updated. https://docs.python.org/3.9/library/collections.html says:
"""
Deprecated since version 3.3, will be removed in version 3.10: Moved
Collections Abstract Base Classes to the collections.abc module. For
backwards compatibility, they continue to be visible in this module
through Python 3.9.
"""
Time to move on.
More information about this bug and the reason for filing it can be found on
https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation
Paul
[0] https://bugs.debian.org/1006836
[1] https://qa.debian.org/excuses.php?package=python3-defaults
https://ci.debian.net/data/autopkgtest/testing/amd64/p/pysurfer/20663038/log.gz
============================= test session starts
==============================
platform linux -- Python 3.10.4, pytest-6.2.5, py-1.10.0, pluggy-1.0.0
-- /usr/bin/python3
cachedir: .pytest_cache
rootdir: /tmp/autopkgtest-lxc.v2wopsdx/downtmp/autopkgtest_tmp
collecting ... collected 0 items / 2 errors
==================================== ERRORS
====================================
_____________________ ERROR collecting tests/test_utils.py
_____________________
ImportError while importing test module
'/tmp/autopkgtest-lxc.v2wopsdx/downtmp/autopkgtest_tmp/tests/test_utils.py'.
Hint: make sure your test modules/packages have valid Python names.
Traceback:
/usr/lib/python3.10/importlib/__init__.py:126: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
tests/test_utils.py:9: in <module>
from surfer import utils
/usr/lib/python3/dist-packages/surfer/__init__.py:1: in <module>
from .viz import Brain, TimeViewer # noqa
/usr/lib/python3/dist-packages/surfer/viz.py:25: in <module>
from . import utils, io
/usr/lib/python3/dist-packages/surfer/utils.py:1: in <module>
from collections import Sequence
E ImportError: cannot import name 'Sequence' from 'collections'
(/usr/lib/python3.10/collections/__init__.py)
______________________ ERROR collecting tests/test_viz.py
______________________
ImportError while importing test module
'/tmp/autopkgtest-lxc.v2wopsdx/downtmp/autopkgtest_tmp/tests/test_viz.py'.
Hint: make sure your test modules/packages have valid Python names.
Traceback:
/usr/lib/python3.10/importlib/__init__.py:126: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
tests/test_viz.py:15: in <module>
from surfer import Brain, io, utils
/usr/lib/python3/dist-packages/surfer/__init__.py:1: in <module>
from .viz import Brain, TimeViewer # noqa
/usr/lib/python3/dist-packages/surfer/viz.py:25: in <module>
from . import utils, io
/usr/lib/python3/dist-packages/surfer/utils.py:1: in <module>
from collections import Sequence
E ImportError: cannot import name 'Sequence' from 'collections'
(/usr/lib/python3.10/collections/__init__.py)
=============================== warnings summary
===============================
tests/test_utils.py:1
/tmp/autopkgtest-lxc.v2wopsdx/downtmp/autopkgtest_tmp/tests/test_utils.py:1:
DeprecationWarning: The distutils package is deprecated and slated for
removal in Python 3.12. Use setuptools or check PEP 632 for potential
alternatives
from distutils.version import LooseVersion
../../../../usr/lib/python3/dist-packages/traitsui/table_column.py:461
/usr/lib/python3/dist-packages/traitsui/table_column.py:461:
DeprecationWarning: In the future, a default value of type 'dict' in an
Any trait will be shared between all instances. To keep the current
semantics, replace `Any({})` with `Any(factory=dict)` or `Any({1: 2})`
(for example) with `Any(factory=dict, args=({1: 2},))`.
globals = Any({})
../../../../usr/lib/python3/dist-packages/traitsui/tabular_adapter.py:220
/usr/lib/python3/dist-packages/traitsui/tabular_adapter.py:220:
DeprecationWarning: In the future, a default value of type 'dict' in an
Any trait will be shared between all instances. To keep the current
semantics, replace `Any({})` with `Any(factory=dict)` or `Any({1: 2})`
(for example) with `Any(factory=dict, args=({1: 2},))`.
cache = Any({})
-- Docs: https://docs.pytest.org/en/stable/warnings.html
=========================== short test summary info
============================
ERROR tests/test_utils.py
ERROR tests/test_viz.py
!!!!!!!!!!!!!!!!!!! Interrupted: 2 errors during collection
!!!!!!!!!!!!!!!!!!!!
======================== 3 warnings, 2 errors in 4.03s
=========================
autopkgtest [17:27:39]: test command1
OpenPGP_signature
Description: OpenPGP digital signature
--- End Message ---
--- Begin Message ---
Source: pysurfer
Source-Version: 0.11.0-3
Done: Étienne Mollier <emoll...@debian.org>
We believe that the bug you reported is fixed in the latest version of
pysurfer, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1009...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Étienne Mollier <emoll...@debian.org> (supplier of updated pysurfer package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Fri, 08 Apr 2022 11:11:11 +0200
Source: pysurfer
Architecture: source
Version: 0.11.0-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Étienne Mollier <emoll...@debian.org>
Closes: 1009110
Changes:
pysurfer (0.11.0-3) unstable; urgency=medium
.
* Team upload.
* Add python3.10.patch to fix collections import (Closes: #1009110)
* d/{copyright,control}: update home page
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