Your message dated Sun, 03 Apr 2022 08:34:34 +0000 with message-id <e1navgw-0000iz...@fasolo.debian.org> and subject line Bug#1008444: fixed in libstatgen 1.0.15-5 has caused the Debian Bug report #1008444, regarding libstatgen: FTBFS: ar: ../libStatGen_debug.a: file format not recognized to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 1008444: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1008444 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: libstatgen Version: 1.0.15-4 Severity: serious Justification: FTBFS Tags: bookworm sid ftbfs User: lu...@debian.org Usertags: ftbfs-20220326 ftbfs-bookworm Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > make[2]: Entering directory '/<<PKGBUILDDIR>>/vcf' > rm -f ../include/FastQFile.h ../include/BaseCount.h > ../include/BaseComposition.h ../include/FastQStatus.h > rm -f ../include/VcfFile.h ../include/VcfFileReader.h > ../include/VcfFileWriter.h ../include/VcfGenotypeField.h > ../include/VcfGenotypeFormat.h ../include/VcfGenotypeSample.h > ../include/VcfHeader.h ../include/VcfHelper.h ../include/VcfRecord.h > ../include/VcfRecordField.h ../include/VcfRecordFilter.h > ../include/VcfRecordGenotype.h ../include/VcfRecordInfo.h > ../include/VcfSubsetSamples.h ../include/VcfRecordDiscardRules.h > rm -f ../include/GlfException.h ../include/GlfFile.h ../include/GlfHeader.h > ../include/GlfRecord.h ../include/GlfRefSection.h ../include/GlfStatus.h > ar d ../libStatGen.a obj/FastQFile.o obj/BaseCount.o obj/BaseComposition.o > obj/FastQStatus.o > ar d ../libStatGen.a obj/VcfFile.o obj/VcfFileReader.o obj/VcfFileWriter.o > obj/VcfGenotypeField.o obj/VcfGenotypeFormat.o obj/VcfGenotypeSample.o > obj/VcfHeader.o obj/VcfHelper.o obj/VcfRecord.o obj/VcfRecordField.o > obj/VcfRecordFilter.o obj/VcfRecordGenotype.o obj/VcfRecordInfo.o > obj/VcfSubsetSamples.o obj/VcfRecordDiscardRules.o > ar d ../libStatGen.a obj/GlfException.o obj/GlfFile.o obj/GlfHeader.o > obj/GlfRecord.o obj/GlfRefSection.o obj/GlfStatus.o > ranlib ../libStatGen.a > rm -f ../include/SamFileHeader.h ../include/SamFile.h > ../include/GenericSamInterface.h ../include/SamInterface.h > ../include/BamInterface.h ../include/SamRecord.h ../include/BamIndex.h > ../include/SamHeaderHD.h ../include/SamHeaderPG.h > ../include/SamHeaderRecord.h ../include/SamHeaderSQ.h > ../include/SamHeaderRG.h ../include/SamHeaderTag.h ../include/SamValidation.h > ../include/SamStatistics.h ../include/SamQuerySeqWithRefHelper.h > ../include/SamFilter.h ../include/PileupElement.h > ../include/PileupElementBaseQual.h ../include/SamReferenceInfo.h > ../include/SamTags.h ../include/PosList.h ../include/CigarHelper.h > ../include/SamRecordPool.h ../include/SamCoordOutput.h > ../include/SamRecordHelper.h ../include/Pileup.h ../include/SamHelper.h > ../include/SamFlag.h ../include/SamStatus.h > ranlib ../libStatGen.a > ranlib ../libStatGen.a > ar d ../libStatGen_debug.a obj/debug/FastQFile.o obj/debug/BaseCount.o > obj/debug/BaseComposition.o obj/debug/FastQStatus.o > ar d ../libStatGen.a obj/SamFileHeader.o obj/SamFile.o > obj/GenericSamInterface.o obj/SamInterface.o obj/BamInterface.o > obj/SamRecord.o obj/BamIndex.o obj/SamHeaderHD.o obj/SamHeaderPG.o > obj/SamHeaderRecord.o obj/SamHeaderSQ.o obj/SamHeaderRG.o obj/SamHeaderTag.o > obj/SamValidation.o obj/SamStatistics.o obj/SamQuerySeqWithRefHelper.o > obj/SamFilter.o obj/PileupElement.o obj/PileupElementBaseQual.o > obj/SamReferenceInfo.o obj/SamTags.o obj/PosList.o obj/CigarHelper.o > obj/SamRecordPool.o obj/SamCoordOutput.o obj/SamRecordHelper.o > ar d ../libStatGen_debug.a obj/debug/VcfFile.o obj/debug/VcfFileReader.o > obj/debug/VcfFileWriter.o obj/debug/VcfGenotypeField.o > obj/debug/VcfGenotypeFormat.o obj/debug/VcfGenotypeSample.o > obj/debug/VcfHeader.o obj/debug/VcfHelper.o obj/debug/VcfRecord.o > obj/debug/VcfRecordField.o obj/debug/VcfRecordFilter.o > obj/debug/VcfRecordGenotype.o obj/debug/VcfRecordInfo.o > obj/debug/VcfSubsetSamples.o obj/debug/VcfRecordDiscardRules.o > ranlib ../libStatGen_debug.a > ranlib ../libStatGen.a > ar d ../libStatGen_debug.a obj/debug/GlfException.o obj/debug/GlfFile.o > obj/debug/GlfHeader.o obj/debug/GlfRecord.o obj/debug/GlfRefSection.o > obj/debug/GlfStatus.o > ranlib ../libStatGen_debug.a > ar d ../libStatGen_profile.a obj/profile/FastQFile.o obj/profile/BaseCount.o > obj/profile/BaseComposition.o obj/profile/FastQStatus.o > ar d ../libStatGen_debug.a obj/debug/SamFileHeader.o obj/debug/SamFile.o > obj/debug/GenericSamInterface.o obj/debug/SamInterface.o > obj/debug/BamInterface.o obj/debug/SamRecord.o obj/debug/BamIndex.o > obj/debug/SamHeaderHD.o obj/debug/SamHeaderPG.o obj/debug/SamHeaderRecord.o > obj/debug/SamHeaderSQ.o obj/debug/SamHeaderRG.o obj/debug/SamHeaderTag.o > obj/debug/SamValidation.o obj/debug/SamStatistics.o > obj/debug/SamQuerySeqWithRefHelper.o obj/debug/SamFilter.o > obj/debug/PileupElement.o obj/debug/PileupElementBaseQual.o > obj/debug/SamReferenceInfo.o obj/debug/SamTags.o obj/debug/PosList.o > obj/debug/CigarHelper.o obj/debug/SamRecordPool.o obj/debug/SamCoordOutput.o > obj/debug/SamRecordHelper.o > ar: ../libStatGen_debug.a: file format not recognized > ar d ../libStatGen_profile.a obj/profile/VcfFile.o > obj/profile/VcfFileReader.o obj/profile/VcfFileWriter.o > obj/profile/VcfGenotypeField.o obj/profile/VcfGenotypeFormat.o > obj/profile/VcfGenotypeSample.o obj/profile/VcfHeader.o > obj/profile/VcfHelper.o obj/profile/VcfRecord.o obj/profile/VcfRecordField.o > obj/profile/VcfRecordFilter.o obj/profile/VcfRecordGenotype.o > obj/profile/VcfRecordInfo.o obj/profile/VcfSubsetSamples.o > obj/profile/VcfRecordDiscardRules.o > make[2]: *** [../Makefiles/Makefile.lib:59: specific_clean] Error 1 The full build log is available from: http://qa-logs.debian.net/2022/03/26/libstatgen_1.0.15-4_unstable.log A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! If you reassign this bug to another package, please marking it as 'affects'-ing this package. See https://www.debian.org/Bugs/server-control#affects If you fail to reproduce this, please provide a build log and diff it with mine so that we can identify if something relevant changed in the meantime.
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--- Begin Message ---Source: libstatgen Source-Version: 1.0.15-5 Done: Andreas Tille <ti...@debian.org> We believe that the bug you reported is fixed in the latest version of libstatgen, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 1008...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated libstatgen package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Sun, 03 Apr 2022 10:05:06 +0200 Source: libstatgen Architecture: source Version: 1.0.15-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Andreas Tille <ti...@debian.org> Closes: 1008444 Changes: libstatgen (1.0.15-5) unstable; urgency=medium . * Team upload. * Prevent parallel builds Closes: #1008444 Checksums-Sha1: eb1eba7fe5f120066aa417aed0b3b58fdc406335 2176 libstatgen_1.0.15-5.dsc d4a0fe1167e971f0f3fbb961f07827a3f8ba8448 20696 libstatgen_1.0.15-5.debian.tar.xz 71db237659c8171a65c2d7078ba9920628853ffd 7473 libstatgen_1.0.15-5_amd64.buildinfo Checksums-Sha256: b2b233741f785965d6434b5036bf72036693097509e31e47eba7e9f20a0892b6 2176 libstatgen_1.0.15-5.dsc 0fad82ad3d5451973184977d24e401f557daa3028a921141b668a1fdba5d9990 20696 libstatgen_1.0.15-5.debian.tar.xz 1289d36787b00dd4fed0e2bf13975e27594dd5dc5efd57c887a397658327d156 7473 libstatgen_1.0.15-5_amd64.buildinfo Files: c8648305676ee5d44206a2ad5c146db2 2176 science optional libstatgen_1.0.15-5.dsc 0d0b30e4306fe6b71c098cab28a02c6e 20696 science optional libstatgen_1.0.15-5.debian.tar.xz 4818ab8061bf70502d642b78853c1b5a 7473 science optional libstatgen_1.0.15-5_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmJJVecRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtETmhAAkCJd+S54LVEI+Cxd16GqWuQaEVi2bToq 4JKtBh8z8Tn20VZBUSaAOiZVR9ooQflZUSLi+WpY6El8fOa0gI1n8tCvu6DptPU8 hqQWrJs6SUAPtu+MBNl1LUbq1TEZranfvYcpiX6aZo6HEzRmQ7vQg4jnO3M6UcPb SkX69uk1mEhRgYKRtMXaQnVpz3hBCY+D4m0R9GBh0o2aA2oDepRswlvB44aDOQLi Ddb4GkRNoTg+4LkktMji1wU69aOWE4JGpJ+qiouMUd1+iSHAKdLuuZaOPqs+INMW p/yor4MKA+n9Uh20tpjQDEsggAgDRsAlcS24pXdlsG9Bplk3p1R2ZyU6t4jbjMEC PE2OoRnm9XjDIGKX4eKdmNbrCymoyYFKjPLAkyW7M9nyuoGyTKLLHK3n0a4fUf5M sds1Q8zveuH+O7a8L5rOs+bbSoPojOXtLxEDWmP3diDYhDz7h6HcDdsHCm5G4M+5 PJd2oPH9QxHwChNGVTWAERUq31VjDA6cMogT+BJg+ytJvlFFjakSyFg+0s1Pg9Yt lB3wA1p7+psjQ5mZ9fTXdCGkB7ZgtOLdtBK0uqa/nyYqVY1EsTOjML8oErX/rMIV WHDzJ3ocUDztNx5gR2TdbBKk1l5LaNH+acyYesxq7mCSZD0AZU8lqZrK2mMnzg1Y pzyzCfJevwE= =HQiP -----END PGP SIGNATURE-----
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