If you build off the current head, the version string should say "18 Feb 2022", not "17 Feb 2022".
On Sat, Feb 19, 2022 at 7:02 AM Andreas Tille <andr...@an3as.eu> wrote: > Hi again, > > Am Sat, Feb 19, 2022 at 12:28:21AM -0800 schrieb Chris Chang: > > Ok, new release/tag created. > > I've built the new version now. The bad news is that it keeps on > SEGFAULTing for me: > > ... > (gdb) run > Starting program: /usr/lib/plink2/plink2-sse3 --debug --pfile tmp_data > --export vcf vcf-dosage=DS --out tmp_data2 > [Thread debugging using libthread_db enabled] > Using host libthread_db library "/lib/x86_64-linux-gnu/libthread_db.so.1". > [New Thread 0x7ffff4cc7640 (LWP 985019)] > [New Thread 0x7ffff44c6640 (LWP 985020)] > [New Thread 0x7fffebcc5640 (LWP 985021)] > PLINK v2.00a3 64-bit (17 Feb 2022) > www.cog-genomics.org/plink/2.0/ > (C) 2005-2022 Shaun Purcell, Christopher Chang GNU General Public > License v3 > Logging to tmp_data2.log. > Options in effect: > --debug > --export vcf vcf-dosage=DS > --out tmp_data2 > --pfile tmp_data > > Start time: Sat Feb 19 16:00:00 2022 > 31998 MiB RAM detected; reserving 15999 MiB for main workspace. > Using up to 4 compute threads. > [New Thread 0x7ffff7fc5640 (LWP 985022)] > > Thread 1 "plink2-sse3" received signal SIGSEGV, Segmentation fault. > plink2::LoadPsam (psamname=psamname@entry=0x7fffffffbe60 "tmp_data.psam", > pheno_range_list_ptr=<optimized out>, fam_cols=..., pheno_ct_max=<optimized > out>, > missing_pheno=<optimized out>, affection_01=0, max_thread_ct=4, > piip=0x7fffffff8870, sample_include_ptr=0x7fffffff8790, > founder_info_ptr=0x7fffffff87a8, sex_nm_ptr=0x7fffffff8798, > sex_male_ptr=0x7fffffff87a0, pheno_cols_ptr=0x7fffffff8770, > pheno_names_ptr=0x7fffffff8780, raw_sample_ct_ptr=0x7fffffff8728, > pheno_ct_ptr=0x7fffffff8720, > max_pheno_name_blen_ptr=0x7fffffff87b0) at ../plink2_psam.cc:611 > 611 pheno_cols[pheno_idx].nonmiss = nullptr; > > > Please let me know if I can do further checks. > > Kind regards > > Andreas. > > -- > http://fam-tille.de >
