Package: libopenmpi3 Version: 4.1.2-1 Severity: grave Justification: renders package unusable
Dear Maintainer, I just updated my chroot of cowbuilder to build my own package that runs some parallel programs during make test. When these are run I get errors like this 7/27 Test #16: minpvprocessor ......................***Failed 0.64 sec [smaug.dr-blatt.de:34326] mca_base_component_repository_open: unable to open mca_pmix_ext3x: libpmix.so.2: cannot open shared object file: No such file or directory (ignored) [smaug.dr-blatt.de:34326] [[62064,0],0] ORTE_ERROR_LOG: Not found in file ../../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line 320 -------------------------------------------------------------------------- It looks like orte_init failed for some reason; your parallel process is likely to abort. There are many reasons that a parallel process can fail during orte_init; some of which are due to configuration or environment problems. This failure appears to be an internal failure; here's some additional information (which may only be relevant to an Open MPI developer): opal_pmix_base_select failed --> Returned value Not found (-13) instead of ORTE_SUCCESS -------------------------------------------------------------------------- It seems libpmix2 library is not found. There seems to have been an aborted mini transition for that lately, see https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=951310 which might be the cause for this. root@smaug:/tmp/buildd/opm-grid-2021.10# ldd /usr/lib/x86_64-linux- gnu/openmpi/lib/openmpi3/mca_pmix_ext3x.so linux-vdso.so.1 (0x00007ffd381e7000) /usr/lib/cowdancer/libcowdancer.so (0x00007f4e86c75000) libopen-pal.so.40 => /usr/lib/x86_64-linux-gnu/libopen-pal.so.40 (0x00007f4e86bb8000) libpmix.so.2 => not found libevent_core-2.1.so.7 => /usr/lib/x86_64-linux- gnu/libevent_core-2.1.so.7 (0x00007f4e86b7e000) libpthread.so.0 => /lib/x86_64-linux-gnu/libpthread.so.0 (0x00007f4e86b5d000) libc.so.6 => /lib/x86_64-linux-gnu/libc.so.6 (0x00007f4e86993000) libdl.so.2 => /lib/x86_64-linux-gnu/libdl.so.2 (0x00007f4e8698c000) libutil.so.1 => /lib/x86_64-linux-gnu/libutil.so.1 (0x00007f4e86987000) libhwloc.so.15 => /usr/lib/x86_64-linux-gnu/libhwloc.so.15 (0x00007f4e8692b000) libevent_pthreads-2.1.so.7 => /usr/lib/x86_64-linux- gnu/libevent_pthreads-2.1.so.7 (0x00007f4e86926000) /lib64/ld-linux-x86-64.so.2 (0x00007f4e86ca4000) libm.so.6 => /lib/x86_64-linux-gnu/libm.so.6 (0x00007f4e867e3000) libudev.so.1 => /usr/lib/x86_64-linux-gnu/libudev.so.1 (0x00007f4e867b8000) root@smaug:/tmp/buildd/opm-grid-2021.10# Please not that this means that packages tested by salsaci that run parallel programs during make test will fail also. See e.g. https://salsa.debian.org/science-team/opm-grid/-/jobs/2466390 -- System Information: Debian Release: bookworm/sid APT prefers unstable APT policy: (500, 'unstable') Architecture: amd64 (x86_64) Kernel: Linux 5.10.0-11-amd64 (SMP w/32 CPU threads) Locale: LANG=C, LC_CTYPE=C (charmap=ANSI_X3.4-1968) (ignored: LC_ALL set to C), LANGUAGE not set Shell: /bin/sh linked to /bin/dash Init: unable to detect Versions of packages libopenmpi3 depends on: ii libc6 2.33-5 ii libevent-core-2.1-7 2.1.12-stable-1 ii libevent-pthreads-2.1-7 2.1.12-stable-1 ii libfabric1 1.11.0-3 ii libgcc-s1 11.2.0-16 ii libhwloc-plugins 2.7.0-2 ii libhwloc15 2.7.0-2 ii libibverbs1 39.0-1 ii libnl-3-200 3.5.0-0.1 ii libpmix2 4.1.2-1 ii libpsm-infinipath1 3.3+20.604758e7-6.1 ii libpsm2-2 11.2.185-1 ii libstdc++6 11.2.0-16 ii libucx0 1.12.1~rc1-1 ii zlib1g 1:1.2.11.dfsg-2 libopenmpi3 recommends no packages. libopenmpi3 suggests no packages.
