Your message dated Fri, 12 Nov 2021 14:35:47 +0000 with message-id <e1mlxed-000fjd...@fasolo.debian.org> and subject line Bug#984019: fixed in cmtk 3.3.1p2+dfsg-1 has caused the Debian Bug report #984019, regarding cmtk: ftbfs with GCC-11 to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 984019: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=984019 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Package: src:cmtk Version: 3.3.1p1+dfsg-2 Severity: normal Tags: sid bookworm User: debian-...@lists.debian.org Usertags: ftbfs-gcc-11 [This bug is not targeted to the upcoming bullseye release] Please keep this issue open in the bug tracker for the package it was filed for. If a fix in another package is required, please file a bug for the other package (or clone), and add a block in this package. Please keep the issue open until the package can be built in a follow-up test rebuild. The package fails to build in a test rebuild on at least amd64 with gcc-11/g++-11, but succeeds to build with gcc-10/g++-10. The severity of this report will be raised before the bookworm release, so nothing has to be done for the bullseye release. The full build log can be found at: http://people.debian.org/~doko/logs/20210228/filtered/gcc11/cmtk_3.3.1p1+dfsg-2_unstable_gcc11.log The last lines of the build log are at the end of this report. To build with GCC 11, either set CC=gcc-11 CXX=g++-11 explicitly, or install the gcc, g++, gfortran, ... packages from experimental. apt-get -t=experimental install g++ Common build failures are new warnings resulting in build failures with -Werror turned on, or new/dropped symbols in Debian symbols files. For other C/C++ related build failures see the porting guide at http://gcc.gnu.org/gcc-11/porting_to.html GCC 11 defaults to the GNU++17 standard. If your package installs header files in /usr/include, please don't work around C++17 issues by choosing a lower C++ standard for the package build, but fix these issues to build with the C++17 standard. [...] [ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffbiff.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<PKGBUILDDIR>>/Utilities/mxml -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/biffbiff.o -c /<<PKGBUILDDIR>>/Utilities/NrrdIO/biffbiff.c [ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffmsg.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<PKGBUILDDIR>>/Utilities/mxml -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 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Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<PKGBUILDDIR>>/Utilities/mxml -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/libs -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o -c /<<PKGBUILDDIR>>/libs/Numerics/hsschur.cxx [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enum.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<PKGBUILDDIR>>/Utilities/mxml -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/enum.o -c /<<PKGBUILDDIR>>/Utilities/NrrdIO/enum.c [ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<PKGBUILDDIR>>/Utilities/mxml -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/libs -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o -c /<<PKGBUILDDIR>>/libs/Numerics/ibetaf.cxx [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/miscAir.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<PKGBUILDDIR>>/Utilities/mxml -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/miscAir.o -c /<<PKGBUILDDIR>>/Utilities/NrrdIO/miscAir.c [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/simple.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<<PKGBUILDDIR>>/Utilities/mxml -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/simple.o -c /<<PKGBUILDDIR>>/Utilities/NrrdIO/simple.c [ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<PKGBUILDDIR>>/Utilities/mxml -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/libs -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o -c /<<PKGBUILDDIR>>/libs/Numerics/lbfgsb.cxx [ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lq.cxx.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<PKGBUILDDIR>>/Utilities/mxml -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/libs -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lq.cxx.o -c /<<PKGBUILDDIR>>/libs/Numerics/lq.cxx [ 13%] Linking C shared library ../../bin/libNrrdIO.so cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cmake -E cmake_link_script CMakeFiles/NrrdIO.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -shared -Wl,-soname,libNrrdIO.so -o ../../bin/libNrrdIO.so CMakeFiles/NrrdIO.dir/comment.o CMakeFiles/NrrdIO.dir/enumsNrrd.o CMakeFiles/NrrdIO.dir/mop.o 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-DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o -c /<<PKGBUILDDIR>>/libs/Numerics/nsevd.cxx [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/qr.cxx.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<PKGBUILDDIR>>/Utilities/mxml -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/libs -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/qr.cxx.o -c /<<PKGBUILDDIR>>/libs/Numerics/qr.cxx [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/reflections.cxx.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<PKGBUILDDIR>>/Utilities/mxml -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/libs -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o -c /<<PKGBUILDDIR>>/libs/Numerics/reflections.cxx [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/rotations.cxx.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<PKGBUILDDIR>>/Utilities/mxml -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/libs -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o -c /<<PKGBUILDDIR>>/libs/Numerics/rotations.cxx [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sblas.cxx.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<PKGBUILDDIR>>/Utilities/mxml -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/libs -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o -c /<<PKGBUILDDIR>>/libs/Numerics/sblas.cxx [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sevd.cxx.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<PKGBUILDDIR>>/Utilities/mxml -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/libs -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o -c /<<PKGBUILDDIR>>/libs/Numerics/sevd.cxx [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/spddet.cxx.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<PKGBUILDDIR>>/Utilities/mxml -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/libs -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o -c /<<PKGBUILDDIR>>/libs/Numerics/spddet.cxx [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<PKGBUILDDIR>>/Utilities/mxml -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/libs -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o -c /<<PKGBUILDDIR>>/libs/Numerics/studenttdistr.cxx [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<PKGBUILDDIR>>/Utilities/mxml -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/libs -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o -c /<<PKGBUILDDIR>>/libs/Numerics/studentttests.cxx [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/svd.cxx.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<PKGBUILDDIR>>/Utilities/mxml -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/libs -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/svd.cxx.o -c /<<PKGBUILDDIR>>/libs/Numerics/svd.cxx [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<PKGBUILDDIR>>/Utilities/mxml -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/libs -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o -c /<<PKGBUILDDIR>>/libs/Numerics/tdevd.cxx [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<PKGBUILDDIR>>/Utilities/mxml -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/libs -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o -c /<<PKGBUILDDIR>>/libs/Numerics/tridiagonal.cxx [ 16%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<<PKGBUILDDIR>>/Utilities/mxml -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/Utilities/NrrdIO -I/<<PKGBUILDDIR>>/libs -g -O2 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'/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu' [ 16%] Built target cmtkNumerics make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu' make[1]: *** [Makefile:185: all] Error 2 make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu' dh_auto_build: error: cd obj-x86_64-linux-gnu && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1 returned exit code 2 make: *** [debian/rules:33: build] Error 25 dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2
--- End Message ---
--- Begin Message ---Source: cmtk Source-Version: 3.3.1p2+dfsg-1 Done: Andreas Tille <ti...@debian.org> We believe that the bug you reported is fixed in the latest version of cmtk, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 984...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated cmtk package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Fri, 12 Nov 2021 14:36:39 +0100 Source: cmtk Architecture: source Version: 3.3.1p2+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Andreas Tille <ti...@debian.org> Closes: 984019 Changes: cmtk (3.3.1p2+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version Closes: #984019 * Move packaging to Debian Med team * Remove debian/gbp.conf * Standards-Version: 4.6.0 (routine-update) * debhelper-compat 13 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Use ?= for assignments to architecture variables. Checksums-Sha1: a2a9c83f40c6b7930f29734f9d31271f4145bc40 2271 cmtk_3.3.1p2+dfsg-1.dsc dc7b0f4aef9ad0a8954f45b01a17c6508d296153 1052908 cmtk_3.3.1p2+dfsg.orig.tar.xz 8a51457d60837d333ae794d5d3b58f71ec91bb0e 9912 cmtk_3.3.1p2+dfsg-1.debian.tar.xz 2bd01e9a04d1cf7d8e30c50325a0fa73177f59ff 9485 cmtk_3.3.1p2+dfsg-1_amd64.buildinfo Checksums-Sha256: 88e90a7b7a682b303d206d60eaff62889e6c792c91e69ad2c37a6e66f7b66255 2271 cmtk_3.3.1p2+dfsg-1.dsc 7854c58372f2c7dcf0b0ed019734181913ee3ab7a28e1dd3113c7c3df3437d75 1052908 cmtk_3.3.1p2+dfsg.orig.tar.xz 5fa7c5036b2ab50e54f1c0ffc88aa231f2eb695a76bbbd3e60176c1ae16549d1 9912 cmtk_3.3.1p2+dfsg-1.debian.tar.xz fdae36037f61c031230c40b244bac137a13780f60d624e4954cd0d38cd7c03eb 9485 cmtk_3.3.1p2+dfsg-1_amd64.buildinfo Files: a56f82522482fd2c48c1425e84933fc1 2271 science optional cmtk_3.3.1p2+dfsg-1.dsc 0e5d178fc5627441505bf8fc04d50cf8 1052908 science optional cmtk_3.3.1p2+dfsg.orig.tar.xz 7849aa220fa3dd5ae440eed547baf30b 9912 science optional cmtk_3.3.1p2+dfsg-1.debian.tar.xz aa4432cf2ac4532c4904f157a5afd7fa 9485 science optional cmtk_3.3.1p2+dfsg-1_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmGOctURHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHEpA/+L59h3zKbaazAeJ7waSbjTlhI3JZtuy7C rPDHVEn/vXI9GTEx94ojiNVRvvhR4/iF97GhDFlprrq/MJ9B7VHEt4w8Vz1TnOYY d0l+AePiyf0nYOCVNUgneYvsVHp7bOQX5Xd8CLEmJzsEFng8PykHD0xDpEAU/1rL ArqBw2Eq5yI2zAe8mvM4sczr7noed3/lK1FgThFhMkRueM9SRZ9Ge90s+OOJPJj/ mg9KUo9U8pXjl8JHIQsHPxuuKqPkf883JEqPJSJTaZnPcWR6LC5NTolUmJDW+ZVd 3smTa93F3rpynH3flhlykQXkFFexVvdRZvJKL8nqTDzB1+jJUcXmtnNUOyH4PfQJ dS2Vk2V9gHN3UViahKUR+46OU9a1iNvjQ5tMKxVJAEMsTMOllJk8H7kdfAWaoCw0 YewETBoZZ43eOMCbJTGIib5bmbzwpJzF1+ClwgaPVxs3iEmb7bdPNYTBVlKgnpB/ YcfW1QiRzeoLVtSwS2hBjqtEmQIGU/0RnwKjuWWW/1IUBLSzoOCMf9x8MLvr51dk vytsjgj7PC72LqZbhdyvjvyi7qnLrg/2Cz5f7EXyYHSJQGbYjGcyshktTSc4wdtY gHgMVNj7Ny3Hd3kHl8coM4xfHpIihIt2zCdgKKQw4x43G7WcP2ACky3scUppCfpc xshefEo58Vo= =kybI -----END PGP SIGNATURE-----
--- End Message ---
