Your message dated Tue, 09 Nov 2021 21:21:51 +0000
with message-id <e1mkyyx-0001ls...@fasolo.debian.org>
and subject line Bug#984421: fixed in yade 2021.11~git~6f71ebd-1
has caused the Debian Bug report #984421,
regarding yade: ftbfs with GCC-11
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
984421: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=984421
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:yade
Version: 2021.01a-3
Severity: normal
Tags: sid bookworm
User: debian-...@lists.debian.org
Usertags: ftbfs-gcc-11

[This bug is not targeted to the upcoming bullseye release]

Please keep this issue open in the bug tracker for the package it
was filed for.  If a fix in another package is required, please
file a bug for the other package (or clone), and add a block in this
package. Please keep the issue open until the package can be built in
a follow-up test rebuild.

The package fails to build in a test rebuild on at least amd64 with
gcc-11/g++-11, but succeeds to build with gcc-10/g++-10. The
severity of this report will be raised before the bookworm release,
so nothing has to be done for the bullseye release.

The full build log can be found at:
http://people.debian.org/~doko/logs/20210228/filtered/gcc11/yade_2021.01a-3_unstable_gcc11.log
The last lines of the build log are at the end of this report.

To build with GCC 11, either set CC=gcc-11 CXX=g++-11 explicitly,
or install the gcc, g++, gfortran, ... packages from experimental.

  apt-get -t=experimental install g++ 

Common build failures are new warnings resulting in build failures with
-Werror turned on, or new/dropped symbols in Debian symbols files.
For other C/C++ related build failures see the porting guide at
http://gcc.gnu.org/gcc-11/porting_to.html

GCC 11 defaults to the GNU++17 standard.  If your package installs
header files in /usr/include, please don't work around C++17 issues
by choosing a lower C++ standard for the package build, but fix these
issues to build with the C++17 standard.

[...]
/usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK 
-DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK 
-DBOOST_IOSTREAMS_DYN_LINK -DBOOST_LOG_DYN_LINK -DBOOST_PYTHON_DYN_LINK 
-DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK 
-DBOOST_THREAD_DYN_LINK -DMAX_LOG_LEVEL=5 -DQT_CORE_LIB -DQT_GUI_LIB 
-DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB 
-DSUITESPARSE_VERSION_4 -DYADE_BOOST_LOG -DYADE_DISABLE_REAL_MULTI_HP 
-DYADE_FEM -DYADE_ODEINT -DYADE_POTENTIAL_PARTICLES -DYADE_REAL_BIT=64 
-DYADE_REAL_DEC=15 -DYADE_SPH -D_GLViewer_EXPORTS -I/<<PKGBUILDDIR>> 
-I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include 
-I/usr/include/eigen3 -I/usr/include/glib-2.0 
-I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/suitesparse 
-I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi 
-I/usr/lib/x86_64-linux-gnu/openmpi/include 
-I/usr/lib/python3/dist-packages/mpi4py/include -I/<<PKGBUILDDIR>>/debian/b
 uild -I/usr/include/QGLViewer -I/usr/include/x86_64-linux-gnu/qt5 
-I/usr/include/x86_64-linux-gnu/qt5/QtWidgets 
-I/usr/include/x86_64-linux-gnu/qt5/QtGui 
-I/usr/include/x86_64-linux-gnu/qt5/QtCore 
-I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ 
-I/usr/include/x86_64-linux-gnu/qt5/QtXml 
-I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include 
-I/usr/include/x86_64-linux-gnu -I/usr/include/c++/11 
-I/usr/include/x86_64-linux-gnu/c++/11 -I/usr/include/c++/11/backward 
-I/usr/lib/gcc/x86_64-linux-gnu/11/include -I/usr/local/include --include 
/<<PKGBUILDDIR>>/debian/build/gui/_GLViewer_autogen/moc_predefs.h 
--output-dep-file -o 
/<<PKGBUILDDIR>>/debian/build/gui/_GLViewer_autogen/OXRBQHTNNB/moc_OpenGLManager.cpp
 /<<PKGBUILDDIR>>/gui/qt5/OpenGLManager.hpp
AutoMoc: Generating 
"SRC:/debian/build/gui/_GLViewer_autogen/OXRBQHTNNB/moc_GLViewer.cpp", because 
it doesn't exist, from "SRC:/gui/qt5/GLViewer.hpp"
/usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK 
-DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK 
-DBOOST_IOSTREAMS_DYN_LINK -DBOOST_LOG_DYN_LINK -DBOOST_PYTHON_DYN_LINK 
-DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK 
-DBOOST_THREAD_DYN_LINK -DMAX_LOG_LEVEL=5 -DQT_CORE_LIB -DQT_GUI_LIB 
-DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB 
-DSUITESPARSE_VERSION_4 -DYADE_BOOST_LOG -DYADE_DISABLE_REAL_MULTI_HP 
-DYADE_FEM -DYADE_ODEINT -DYADE_POTENTIAL_PARTICLES -DYADE_REAL_BIT=64 
-DYADE_REAL_DEC=15 -DYADE_SPH -D_GLViewer_EXPORTS -I/<<PKGBUILDDIR>> 
-I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include 
-I/usr/include/eigen3 -I/usr/include/glib-2.0 
-I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/suitesparse 
-I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi 
-I/usr/lib/x86_64-linux-gnu/openmpi/include 
-I/usr/lib/python3/dist-packages/mpi4py/include -I/<<PKGBUILDDIR>>/debian/b
 uild -I/usr/include/QGLViewer -I/usr/include/x86_64-linux-gnu/qt5 
-I/usr/include/x86_64-linux-gnu/qt5/QtWidgets 
-I/usr/include/x86_64-linux-gnu/qt5/QtGui 
-I/usr/include/x86_64-linux-gnu/qt5/QtCore 
-I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ 
-I/usr/include/x86_64-linux-gnu/qt5/QtXml 
-I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include 
-I/usr/include/x86_64-linux-gnu -I/usr/include/c++/11 
-I/usr/include/x86_64-linux-gnu/c++/11 -I/usr/include/c++/11/backward 
-I/usr/lib/gcc/x86_64-linux-gnu/11/include -I/usr/local/include --include 
/<<PKGBUILDDIR>>/debian/build/gui/_GLViewer_autogen/moc_predefs.h 
--output-dep-file -o 
/<<PKGBUILDDIR>>/debian/build/gui/_GLViewer_autogen/OXRBQHTNNB/moc_GLViewer.cpp 
/<<PKGBUILDDIR>>/gui/qt5/GLViewer.hpp
AutoMoc: Reading dependencies from 
"SRC:/debian/build/gui/_GLViewer_autogen/OXRBQHTNNB/moc_OpenGLManager.cpp.d"
AutoMoc: Reading dependencies from 
"SRC:/debian/build/gui/_GLViewer_autogen/OXRBQHTNNB/moc_GLViewer.cpp.d"
AutoMoc: Generating MOC compilation 
"SRC:/debian/build/gui/_GLViewer_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file 
"SRC:/debian/build/gui/CMakeFiles/_GLViewer_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file 
"SRC:/debian/build/gui/CMakeFiles/_GLViewer_autogen.dir/AutogenUsed.txt"
make[3]: Leaving directory '/<<PKGBUILDDIR>>/debian/build'
[  0%] Built target _GLViewer_autogen
make  -f gui/CMakeFiles/_GLViewer.dir/build.make 
gui/CMakeFiles/_GLViewer.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/debian/build'
cd /<<PKGBUILDDIR>>/debian/build && /usr/bin/cmake -E cmake_depends "Unix 
Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/gui /<<PKGBUILDDIR>>/debian/build 
/<<PKGBUILDDIR>>/debian/build/gui 
/<<PKGBUILDDIR>>/debian/build/gui/CMakeFiles/_GLViewer.dir/DependInfo.cmake 
--color=
Dependee 
"/<<PKGBUILDDIR>>/debian/build/gui/CMakeFiles/_GLViewer.dir/DependInfo.cmake" 
is newer than depender 
"/<<PKGBUILDDIR>>/debian/build/gui/CMakeFiles/_GLViewer.dir/depend.internal".
Dependee 
"/<<PKGBUILDDIR>>/debian/build/gui/CMakeFiles/CMakeDirectoryInformation.cmake" 
is newer than depender 
"/<<PKGBUILDDIR>>/debian/build/gui/CMakeFiles/_GLViewer.dir/depend.internal".
Scanning dependencies of target _GLViewer
make[3]: Leaving directory '/<<PKGBUILDDIR>>/debian/build'
make  -f gui/CMakeFiles/_GLViewer.dir/build.make 
gui/CMakeFiles/_GLViewer.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/debian/build'
[  1%] Building CXX object 
gui/CMakeFiles/_GLViewer.dir/_GLViewer_autogen/mocs_compilation.cpp.o
cd /<<PKGBUILDDIR>>/debian/build/gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB 
-DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK 
-DBOOST_FILESYSTEM_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_LOG_DYN_LINK 
-DBOOST_PYTHON_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK 
-DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DMAX_LOG_LEVEL=5 -DQT_CORE_LIB 
-DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB 
-DSUITESPARSE_VERSION_4 -DYADE_BOOST_LOG -DYADE_DISABLE_REAL_MULTI_HP 
-DYADE_FEM -DYADE_ODEINT -DYADE_POTENTIAL_PARTICLES -DYADE_REAL_BIT=64 
-DYADE_REAL_DEC=15 -DYADE_SPH -D_GLViewer_EXPORTS 
-I/<<PKGBUILDDIR>>/debian/build/gui/_GLViewer_autogen/include 
-I/<<PKGBUILDDIR>> -I/usr/include/python3.9 
-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/eigen3 
-I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include 
-I/usr/include/suitesparse -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi 
-I/usr/lib/x86_64-linux-g
 nu/openmpi/include -I/usr/lib/python3/dist-packages/mpi4py/include 
-I/<<PKGBUILDDIR>>/debian/build -I/usr/include/QGLViewer -isystem 
/usr/include/x86_64-linux-gnu/qt5 -isystem 
/usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem 
/usr/include/x86_64-linux-gnu/qt5/QtGui -isystem 
/usr/include/x86_64-linux-gnu/qt5/QtCore -isystem 
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem 
/usr/include/x86_64-linux-gnu/qt5/QtXml -isystem 
/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -g -O2 
-ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat 
-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -Werror -Wformat 
-Wformat-security -Wformat-nonliteral -Wall -Wextra -Wnarrowing -Wreturn-type 
-Wuninitialized -Wfloat-conversion -Wcast-align -Wdisabled-optimization 
-Wtrampolines -Wpointer-arith -Wswitch-bool -Wwrite-strings -Wnon-virtual-dtor 
-Wreturn-local-addr  -Wno-error=cpp -fdce -fstack-protector-strong -DYADE_VTK 
-DYADE_OPENMP -fopenmp -DYADE_GTS  -DQGLVIEWER_FOUND -DYADE_O
 PENGL -DYADE_QT5  -DYADE_CGAL -DFLOW_ENGINE -DFLOW_ENGINE  -DLINSOLV -pthread 
-DYADE_MPI -DTWOPHASEFLOW -DYADE_GL2PS -DLBM_ENGINE -DTHERMAL -DPARTIALSAT 
-fPIC   -ftrack-macro-expansion=0 -save-temps -DEIGEN_DONT_VECTORIZE 
-DEIGEN_DONT_ALIGN -DEIGEN_DISABLE_UNALIGNED_ARRAY_ASSERT 
-DCGAL_DISABLE_ROUNDING_MATH_CHECK -frounding-math -fPIC -std=gnu++14 -o 
CMakeFiles/_GLViewer.dir/_GLViewer_autogen/mocs_compilation.cpp.o -c 
/<<PKGBUILDDIR>>/debian/build/gui/_GLViewer_autogen/mocs_compilation.cpp
In file included from /usr/include/boost/python/exception_translator.hpp:10,
                 from /usr/include/boost/python.hpp:28,
                 from /<<PKGBUILDDIR>>/lib/high-precision/RealHPConfig.hpp:35,
                 from /<<PKGBUILDDIR>>/lib/high-precision/Real.hpp:243,
                 from /<<PKGBUILDDIR>>/lib/base/Math.hpp:12,
                 from /<<PKGBUILDDIR>>/core/Omega.hpp:20,
                 from 
/<<PKGBUILDDIR>>/debian/build/gui/_GLViewer_autogen/OXRBQHTNNB/../../../../../gui/qt5/GLViewer.hpp:6,
                 from 
/<<PKGBUILDDIR>>/debian/build/gui/_GLViewer_autogen/OXRBQHTNNB/moc_GLViewer.cpp:10,
                 from 
/<<PKGBUILDDIR>>/debian/build/gui/_GLViewer_autogen/mocs_compilation.cpp:2:
/usr/include/boost/bind.hpp:41:273: note: ‘#pragma message: The practice of 
declaring the Bind placeholders (_1, _2, ...) in the global namespace is 
deprecated. Please use <boost/bind/bind.hpp> + using namespace 
boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the 
current behavior.’
   41 | )
      |                                                                         
                                                                                
                                                                                
                                        ^
In file included from /usr/include/boost/python/object/iterator.hpp:28,
                 from /usr/include/boost/python/iterator.hpp:12,
                 from /usr/include/boost/python.hpp:37,
                 from /<<PKGBUILDDIR>>/lib/high-precision/RealHPConfig.hpp:35,
                 from /<<PKGBUILDDIR>>/lib/high-precision/Real.hpp:243,
                 from /<<PKGBUILDDIR>>/lib/base/Math.hpp:12,
                 from /<<PKGBUILDDIR>>/core/Omega.hpp:20,
                 from 
/<<PKGBUILDDIR>>/debian/build/gui/_GLViewer_autogen/OXRBQHTNNB/../../../../../gui/qt5/GLViewer.hpp:6,
                 from 
/<<PKGBUILDDIR>>/debian/build/gui/_GLViewer_autogen/OXRBQHTNNB/moc_GLViewer.cpp:10,
                 from 
/<<PKGBUILDDIR>>/debian/build/gui/_GLViewer_autogen/mocs_compilation.cpp:2:
/usr/include/boost/detail/iterator.hpp:13:75: note: ‘#pragma message: This 
header is deprecated. Use <iterator> instead.’
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      |                                                                         
  ^
In file included from 
/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:277,
                 from /usr/lib/x86_64-linux-gnu/openmpi/include/mpi.h:2887,
                 from /<<PKGBUILDDIR>>/core/Scene.hpp:23,
                 from /<<PKGBUILDDIR>>/pkg/common/PeriodicEngines.hpp:6,
                 from 
/<<PKGBUILDDIR>>/debian/build/gui/_GLViewer_autogen/OXRBQHTNNB/../../../../../gui/qt5/GLViewer.hpp:8,
                 from 
/<<PKGBUILDDIR>>/debian/build/gui/_GLViewer_autogen/OXRBQHTNNB/moc_GLViewer.cpp:10,
                 from 
/<<PKGBUILDDIR>>/debian/build/gui/_GLViewer_autogen/mocs_compilation.cpp:2:
/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/op_inln.h: In 
member function ‘virtual void MPI::Op::Init(void (*)(const void*, void*, int, 
const MPI::Datatype&), bool)’:
/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/op_inln.h:121:25:
 error: cast between incompatible function types from ‘void (*)(void*, void*, 
int*, ompi_datatype_t**, void (*)(void*, void*, int*, ompi_datatype_t**))’ to 
‘void (*)(void*, void*, int*, ompi_datatype_t**)’ [-Werror=cast-function-type]
  121 |     (void)MPI_Op_create((MPI_User_function*) ompi_mpi_cxx_op_intercept,
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/op_inln.h:123:38:
 error: cast between incompatible function types from ‘void (*)(const void*, 
void*, int, const MPI::Datatype&)’ to ‘void (*)(void*, void*, int*, 
ompi_datatype_t**)’ [-Werror=cast-function-type]
  123 |     ompi_op_set_cxx_callback(mpi_op, (MPI_User_function*) func);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~
cc1plus: all warnings being treated as errors
make[3]: *** [gui/CMakeFiles/_GLViewer.dir/build.make:85: 
gui/CMakeFiles/_GLViewer.dir/_GLViewer_autogen/mocs_compilation.cpp.o] Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/debian/build'
make[2]: *** [CMakeFiles/Makefile2:305: gui/CMakeFiles/_GLViewer.dir/all] Error 
2
make[2]: Leaving directory '/<<PKGBUILDDIR>>/debian/build'
make[1]: *** [Makefile:152: all] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>/debian/build'
dh_auto_build: error: cd debian/build && make -j1 "INSTALL=install 
--strip-program=true" VERBOSE=1 returned exit code 2
make: *** [debian/rules:19: build] Error 25
dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2

--- End Message ---
--- Begin Message ---
Source: yade
Source-Version: 2021.11~git~6f71ebd-1
Done: Anton Gladky <gl...@debian.org>

We believe that the bug you reported is fixed in the latest version of
yade, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 984...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Anton Gladky <gl...@debian.org> (supplier of updated yade package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Tue, 09 Nov 2021 22:01:35 +0100
Source: yade
Architecture: source
Version: 2021.11~git~6f71ebd-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 
<debian-science-maintain...@lists.alioth.debian.org>
Changed-By: Anton Gladky <gl...@debian.org>
Closes: 984421
Changes:
 yade (2021.11~git~6f71ebd-1) unstable; urgency=medium
 .
   * [8b5ce9c] Update d/watch
   * [d9a65d5] New upstream version 2021.11~git~6f71ebd. (Closes: #984421)
   * [2ff5d77] Clean d/patches
   * [36d8e29] Use no-as-needed in d/rules
   * [8ae7d89] Set Standards-Version: 4.6.0
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