Your message dated Mon, 20 Sep 2021 21:32:08 +0000 with message-id <e1msqtu-0004bs...@fasolo.debian.org> and subject line Bug#992068: fixed in hdf5 1.10.6+repack-4+deb11u1 has caused the Debian Bug report #992068, regarding libhdf5-mpich-dev: please bump libmpich-dev dependency to (>= 3.3-3~) to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 992068: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=992068 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Package: libhdf5-mpich-dev Version: 1.10.6+repack-4 Severity: serious Tags: patch User: debian...@lists.debian.org Usertags: piuparts During an piuparts upgrade test of libhdf5-mpich-dev on the upgrade path squeeze -> wheezy -> jessie -> stretch -> buster -> bullseye I observed this failure: Setting up libhdf5-mpich-dev (1.10.6+repack-4) ... update-alternatives: priority must be an integer Use 'update-alternatives --help' for program usage information. dpkg: error processing package libhdf5-mpich-dev (--configure): installed libhdf5-mpich-dev package post-installation script subprocess returned error exit status 2 At the time of the failure the libmpich1.0-dev package which Provides: libmpich-dev was still installed, but that uses an ancient mpi alternative scheme the postinst cannot parse. Making the libmpich-dev versioned (buster shipped with 3.3-3 which uses the new alternatives scheme) ensures that libmpich-dev gets upgraded (or rather installed, kicking out the ancient libmpich1.0-dev from squeeze). This fix needs to get backported to bullseye-pu. This needs an update of mpich as well, since there is an unhandled file conflict between libmpich1.0-dev and mpich, #992065. I've verified that using the two updated packages fixes the problematic upgrade path. Andreas PS: it took me quite some time to understand what was going on here so the fix wasn't ready before the bullseye deadline.diff -Nru hdf5-1.10.6+repack/debian/changelog hdf5-1.10.6+repack/debian/changelog --- hdf5-1.10.6+repack/debian/changelog 2021-06-16 23:57:23.000000000 +0200 +++ hdf5-1.10.6+repack/debian/changelog 2021-08-10 16:54:23.000000000 +0200 @@ -1,3 +1,10 @@ +hdf5 (1.10.6+repack-5) UNRELEASED; urgency=medium + + * libhdf5-mpich-dev: Bump libmpich-dev dependency to (>= 3.3-3~) to ensure + the postinst is able to parse the mpi alternative. (Closes: #-1) + + -- Andreas Beckmann <a...@debian.org> Tue, 10 Aug 2021 16:54:23 +0200 + hdf5 (1.10.6+repack-4) unstable; urgency=medium * Revert support for read-only S3 virtual file driver, as it introduced diff -Nru hdf5-1.10.6+repack/debian/control hdf5-1.10.6+repack/debian/control --- hdf5-1.10.6+repack/debian/control 2021-06-16 23:57:23.000000000 +0200 +++ hdf5-1.10.6+repack/debian/control 2021-08-10 16:54:23.000000000 +0200 @@ -480,7 +480,7 @@ zlib1g-dev, libaec-dev, libjpeg-dev, - libmpich-dev, + libmpich-dev (>= 3.3-3~), ${misc:Depends} Suggests: libhdf5-doc Breaks: libhdf5-mpi-dev (= 1.10.6+repack-1~exp4) diff -Nru hdf5-1.10.6+repack/debian/control.in hdf5-1.10.6+repack/debian/control.in --- hdf5-1.10.6+repack/debian/control.in 2021-06-16 23:57:23.000000000 +0200 +++ hdf5-1.10.6+repack/debian/control.in 2021-08-10 16:54:23.000000000 +0200 @@ -480,7 +480,7 @@ zlib1g-dev, libaec-dev, libjpeg-dev, - libmpich-dev, + libmpich-dev (>= 3.3-3~), ${misc:Depends} Suggests: libhdf5-doc Breaks: libhdf5-mpi-dev (= 1.10.6+repack-1~exp4)
libhdf5-mpich-dev_1.10.6+repack-4.log.gz
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--- Begin Message ---Source: hdf5 Source-Version: 1.10.6+repack-4+deb11u1 Done: Gilles Filippini <p...@debian.org> We believe that the bug you reported is fixed in the latest version of hdf5, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 992...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Gilles Filippini <p...@debian.org> (supplier of updated hdf5 package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Sun, 15 Aug 2021 15:56:44 +0200 Source: hdf5 Architecture: source Version: 1.10.6+repack-4+deb11u1 Distribution: bullseye Urgency: medium Maintainer: Gilles Filippini <p...@debian.org> Changed-By: Gilles Filippini <p...@debian.org> Closes: 992068 Changes: hdf5 (1.10.6+repack-4+deb11u1) bullseye; urgency=medium . [ Andreas Beckmann ] * libhdf5-mpich-dev: bump libmpich-dev dependency to (>= 3.3-3~) (Closes: #992068) Checksums-Sha1: f4b0df05f87a1bcbf087d8f9e614f097b532f871 3870 hdf5_1.10.6+repack-4+deb11u1.dsc 4453b88702b3dc56420ae287fe6610013fa58a58 145328 hdf5_1.10.6+repack-4+deb11u1.debian.tar.xz ce0487cbf6da07b881d29b55b20029c75bcb341c 29279 hdf5_1.10.6+repack-4+deb11u1_amd64.buildinfo Checksums-Sha256: abfca382444f23cc9ca3c71fb18e9b9fdf5f62545f8ed6640d7e52c7e77e64e4 3870 hdf5_1.10.6+repack-4+deb11u1.dsc dcd9fb0c0919f5274c054c921d11213176912a24e327e0639ceb96fb30e6edce 145328 hdf5_1.10.6+repack-4+deb11u1.debian.tar.xz 54e75b7c0da7689eab349c58cd9ff4b3b7a72c99717a4c1a1f2f5beca3464232 29279 hdf5_1.10.6+repack-4+deb11u1_amd64.buildinfo Files: e5040623339eed0e4eaebe1509d7f0dd 3870 science optional hdf5_1.10.6+repack-4+deb11u1.dsc 34ea796f40a6742dcabdebddc487600b 145328 science optional hdf5_1.10.6+repack-4+deb11u1.debian.tar.xz 3624801b363c4cf78f58dc6a23b2a18b 29279 science optional hdf5_1.10.6+repack-4+deb11u1_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQFEBAEBCgAuFiEEoJObzArDE05WtIyR7+hsbH/+z4MFAmFINycQHHBpbmlAZGVi aWFuLm9yZwAKCRDv6Gxsf/7Pg0YtB/wMsO5NbcL5nn8ufFjGD6NhnMW1SzFYaH22 VQtzDOFg7/YzyUpixWiyQUe7O8Ake/gIfBED5nVN+1+VXT2/zmyO4c1ge2mICzHx EwgIcWssG2LgMAcZnHusZwv34CKhVpLv2jPI2MPYifsmpM4bn3yO16AbgnMP8qMM 2fl1o0gLgIDEtwvjFK6QN3FSlS0MpKdbNkbWVJFmlPJkKEOo79SyHbW0FUPIyizL KdaadUWo/V/N+CTFaB3D9pvxRZPZhbd9457zdeVhOXD7liX6GQ451nRnDGuL09DZ u7TbVVCtYb+TdvxQlJRrg2LFx3beYSHT257N3O2iDFXdMVjxBNOZ =ZUCZ -----END PGP SIGNATURE-----
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