Source: astropy
Version: 4.2-5
Severity: serious
Justification: FTBFS on amd64
Tags: bullseye sid ftbfs
Usertags: ftbfs-20210728 ftbfs-bullseye
Hi,
During a rebuild of all packages in bullseye, your package failed to build
on amd64.
Relevant part (hopefully):
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> dh_auto_test
> I: pybuild base:232: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build;
> python3.9 -m pytest
> ============================= test session starts
> ==============================
> platform linux -- Python 3.9.2, pytest-6.0.2, py-1.10.0, pluggy-0.13.0
> Matplotlib: 3.3.4
> Freetype: 2.10.4
>
> Running tests with Astropy version 4.2.
> Running tests in .pybuild/cpython3_3.9/build.
>
> Date: 2021-07-29T06:19:49
>
> Platform: Linux-4.19.0-6-cloud-amd64-x86_64-with-glibc2.31
>
> Executable: /usr/bin/python3.9
>
> Full Python Version:
> 3.9.2 (default, Feb 28 2021, 17:03:44)
> [GCC 10.2.1 20210110]
>
> encodings: sys: utf-8, locale: UTF-8, filesystem: utf-8
> byteorder: little
> float info: dig: 15, mant_dig: 15
>
> Package versions:
> Numpy: 1.19.5
> Scipy: 1.6.0
> Matplotlib: 3.3.4
> h5py: 2.10.0
> Pandas: not available
> PyERFA: 1.7.2
>
> Using Astropy options: remote_data: none.
>
> rootdir: /<<PKGBUILDDIR>>, configfile: setup.cfg
> plugins: openfiles-0.5.0, doctestplus-0.9.0, filter-subpackage-0.1.1,
> mpl-0.11, astropy-header-0.1.2, cov-2.10.1, hypothesis-5.43.3, arraydiff-0.3,
> remotedata-0.3.2
> INTERNALERROR> Traceback (most recent call last):
> INTERNALERROR> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/astropy/time/core.py", line
> 2665, in update_leap_seconds
> INTERNALERROR> table = iers.LeapSeconds.auto_open(files)
> INTERNALERROR> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/astropy/utils/iers/iers.py",
> line 1018, in auto_open
> INTERNALERROR> warn('leap-second file is expired.', IERSStaleWarning)
> INTERNALERROR> astropy.utils.iers.iers.IERSStaleWarning: leap-second file is
> expired.
> INTERNALERROR>
> INTERNALERROR> During handling of the above exception, another exception
> occurred:
> INTERNALERROR>
> INTERNALERROR> Traceback (most recent call last):
> INTERNALERROR> File "/usr/lib/python3/dist-packages/_pytest/main.py", line
> 240, in wrap_session
> INTERNALERROR> session.exitstatus = doit(config, session) or 0
> INTERNALERROR> File "/usr/lib/python3/dist-packages/_pytest/main.py", line
> 295, in _main
> INTERNALERROR> config.hook.pytest_collection(session=session)
> INTERNALERROR> File "/usr/lib/python3/dist-packages/pluggy/hooks.py", line
> 286, in __call__
> INTERNALERROR> return self._hookexec(self, self.get_hookimpls(), kwargs)
> INTERNALERROR> File "/usr/lib/python3/dist-packages/pluggy/manager.py",
> line 92, in _hookexec
> INTERNALERROR> return self._inner_hookexec(hook, methods, kwargs)
> INTERNALERROR> File "/usr/lib/python3/dist-packages/pluggy/manager.py",
> line 83, in <lambda>
> INTERNALERROR> self._inner_hookexec = lambda hook, methods, kwargs:
> hook.multicall(
> INTERNALERROR> File "/usr/lib/python3/dist-packages/pluggy/callers.py",
> line 208, in _multicall
> INTERNALERROR> return outcome.get_result()
> INTERNALERROR> File "/usr/lib/python3/dist-packages/pluggy/callers.py",
> line 80, in get_result
> INTERNALERROR> raise ex[1].with_traceback(ex[2])
> INTERNALERROR> File "/usr/lib/python3/dist-packages/pluggy/callers.py",
> line 182, in _multicall
> INTERNALERROR> next(gen) # first yield
> INTERNALERROR> File "/usr/lib/python3/dist-packages/_pytest/warnings.py",
> line 169, in pytest_collection
> INTERNALERROR> with catch_warnings_for_item(
> INTERNALERROR> File "/usr/lib/python3.9/contextlib.py", line 117, in
> __enter__
> INTERNALERROR> return next(self.gen)
> INTERNALERROR> File "/usr/lib/python3/dist-packages/_pytest/warnings.py",
> line 113, in catch_warnings_for_item
> INTERNALERROR> warnings.filterwarnings(*_parse_filter(arg, escape=False))
> INTERNALERROR> File "/usr/lib/python3/dist-packages/_pytest/warnings.py",
> line 39, in _parse_filter
> INTERNALERROR> category = warnings._getcategory(
> INTERNALERROR> File "/usr/lib/python3.9/warnings.py", line 260, in
> _getcategory
> INTERNALERROR> m = __import__(module, None, None, [klass])
> INTERNALERROR> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/astropy/wcs/__init__.py", line
> 26, in <module>
> INTERNALERROR> from .wcs import *
> INTERNALERROR> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/astropy/wcs/wcs.py", line 55,
> in <module>
> INTERNALERROR> from .wcsapi.fitswcs import FITSWCSAPIMixin, SlicedFITSWCS
> INTERNALERROR> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/astropy/wcs/wcsapi/fitswcs.py",
> line 11, in <module>
> INTERNALERROR> from astropy.coordinates import SpectralCoord, Galactic,
> ICRS
> INTERNALERROR> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/astropy/coordinates/__init__.py",
> line 16, in <module>
> INTERNALERROR> from .builtin_frames import *
> INTERNALERROR> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/astropy/coordinates/builtin_frames/__init__.py",
> line 29, in <module>
> INTERNALERROR> from .fk5 import FK5
> INTERNALERROR> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/astropy/coordinates/builtin_frames/fk5.py",
> line 8, in <module>
> INTERNALERROR> from astropy.coordinates import earth_orientation as earth
> INTERNALERROR> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/astropy/coordinates/earth_orientation.py",
> line 19, in <module>
> INTERNALERROR> jd1950 = Time('B1950').jd
> INTERNALERROR> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/astropy/time/core.py", line
> 1489, in __new__
> INTERNALERROR> update_leap_seconds()
> INTERNALERROR> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/astropy/time/core.py", line
> 2669, in update_leap_seconds
> INTERNALERROR> warn("leap-second auto-update failed due to the following "
> INTERNALERROR> astropy.utils.exceptions.AstropyWarning: leap-second
> auto-update failed due to the following exception:
> IERSStaleWarning('leap-second file is expired.')
>
> ============================= 3 warnings in 0.34s
> ==============================
> E: pybuild pybuild:353: test: plugin distutils failed with: exit code=3: cd
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build; python3.9 -m pytest
> dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.9
> returned exit code 13
The full build log is available from:
http://qa-logs.debian.net/2021/07/28/astropy_4.2-5_testing.log
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
If you reassign this bug to another package, please marking it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.
