Your message dated Thu, 04 Mar 2021 16:33:26 +0000 with message-id <e1lhquk-000g0g...@fasolo.debian.org> and subject line Bug#984474: fixed in libbio-asn1-entrezgene-perl 1.730-2 has caused the Debian Bug report #984474, regarding libbio-asn1-entrezgene-perl: missing Breaks+Replaces: libbio-perl-perl (<< 1.7.3) to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 984474: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=984474 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Package: libbio-asn1-entrezgene-perl Version: 1.730-1 Severity: serious User: debian...@lists.debian.org Usertags: piuparts Hi, during a test with piuparts I noticed your package fails to upgrade from 'buster'. It installed fine in 'buster', then the upgrade to 'bullseye' fails because it tries to overwrite other packages files without declaring a Breaks+Replaces relation. See policy 7.6 at https://www.debian.org/doc/debian-policy/ch-relationships.html#overwriting-files-and-replacing-packages-replaces >From the attached log (scroll to the bottom...): Selecting previously unselected package libbio-asn1-entrezgene-perl. Preparing to unpack .../039-libbio-asn1-entrezgene-perl_1.730-1_all.deb ... Unpacking libbio-asn1-entrezgene-perl (1.730-1) ... dpkg: error processing archive /tmp/apt-dpkg-install-eyjeT8/039-libbio-asn1-entrezgene-perl_1.730-1_all.deb (--unpack): trying to overwrite '/usr/share/man/man3/Bio::SeqIO::entrezgene.3pm.gz', which is also in package libbio-perl-perl 1.7.2-3 IIRC bioperl 1.7.3 is the version that got split up into several packages, thus the existing B+R: libbio-perl-perl (<= 1.7.2) is insufficient. cheers, Andreas
bioperl-run_1.7.3-6.log.gz
Description: application/gzip
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--- Begin Message ---Source: libbio-asn1-entrezgene-perl Source-Version: 1.730-2 Done: gregor herrmann <gre...@debian.org> We believe that the bug you reported is fixed in the latest version of libbio-asn1-entrezgene-perl, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 984...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. gregor herrmann <gre...@debian.org> (supplier of updated libbio-asn1-entrezgene-perl package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Thu, 04 Mar 2021 16:51:19 +0100 Source: libbio-asn1-entrezgene-perl Architecture: source Version: 1.730-2 Distribution: unstable Urgency: medium Maintainer: Debian Perl Group <pkg-perl-maintain...@lists.alioth.debian.org> Changed-By: gregor herrmann <gre...@debian.org> Closes: 984474 Changes: libbio-asn1-entrezgene-perl (1.730-2) unstable; urgency=medium . * Bump versioned Breaks/Replaces on libbio-perl-perl' from '<= 1.7.2' to '<< 1.7.3'. The former does not catch libbio-perl-perl 1.7.2-3 in buster. Thanks to Andreas Beckmann for the bug report. (Closes: #984474) * Update years of packaging copyright. * Declare compliance with Debian Policy 4.5.1. * Set Rules-Requires-Root: no. * Bump debhelper-compat to 13. Checksums-Sha1: 108ce5829d05c8c58f426bed01c4ce8088dfdfd6 2613 libbio-asn1-entrezgene-perl_1.730-2.dsc e9cacbed6d68b6db15035dfb6108b5434702cc5c 3340 libbio-asn1-entrezgene-perl_1.730-2.debian.tar.xz Checksums-Sha256: c2055598ccf3449797b8a17d9fa4db1a7a718ed5e8710a90cbf2b4a3a24e3476 2613 libbio-asn1-entrezgene-perl_1.730-2.dsc d800cfe5e006944561f660a6d39e277fccaf0f9f475c61370c158ae39ffdfd26 3340 libbio-asn1-entrezgene-perl_1.730-2.debian.tar.xz Files: bfd48d1be752b564ff89057f0e34f876 2613 perl optional libbio-asn1-entrezgene-perl_1.730-2.dsc efd6c25243fd1b293c447134cf0096c9 3340 perl optional libbio-asn1-entrezgene-perl_1.730-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQKTBAEBCgB9FiEE0eExbpOnYKgQTYX6uzpoAYZJqgYFAmBBCCtfFIAAAAAALgAo aXNzdWVyLWZwckBub3RhdGlvbnMub3BlbnBncC5maWZ0aGhvcnNlbWFuLm5ldEQx RTEzMTZFOTNBNzYwQTgxMDREODVGQUJCM0E2ODAxODY0OUFBMDYACgkQuzpoAYZJ qgZr5RAAg2sglXaOqPVIuEiS6HbBGwR7W6bkmD2ungyOawn8K70MZi+uaPqHKlMl vzT17EJRfOWkATyjCknoV/CyMkXwYARqUvWDdDXZ5EMy8G/+fk36p93QE9VQ3wFe lp3m0gISvT47Sfw0LzKVhDAzbv7Eee9ll16bqxzzku9oL8UqEZnp33E5ujExfdpn ZrRzv74kAJD2fqxfMPuWCryH6BOaTHo0G6tjjtpDfUGTwWVQjdO7499c6dB8x8If m1vptK1PlIWrWngUCcj1y2tZvmDXfra7Oo/GttaBWSB1LABExvrP7sTSnoO/tdv+ 9291pM8Foli9Z/XVC5enVAGUYdJUs/lbCOnBVa3xEKTptXVDUZlWqSNeDx7/1OdJ uXMQNKxPxtDce6UFNzFyGG1M7qyVSgcxbI/yffcuLFwrYOJbqWkMJ40HTHc5orF6 qngki5+SCwY+i+znp2g20IeJeo42aSKH220X870gDiMgtVXEU96j44EZVAJU4/sY oSvEFfF0leF2EwkDkl8J0ooNcMI66j6JvyV6kIwSITmbqV9JDejAhOQbiR1UtN6k y0P8pzf7BVI+7gidaye4iRhIyetVH3PhXqbgVTe+/vvIausKwDr9ivH2aNes0kfP 2qYVC8s994S2R3H0ricepXSxSqGRvkpKSM4671bzdTS8UxsYHaw= =IfLN -----END PGP SIGNATURE-----
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