Your message dated Wed, 17 Feb 2021 07:04:35 +0000 with message-id <e1lcgt1-00076r...@fasolo.debian.org> and subject line Bug#982622: fixed in r-cran-matrixstats 0.58.0-2 has caused the Debian Bug report #982622, regarding r-cran-matrixstats might need Breaks: r-bioc-matrixgenerics (<< 1.2.1) to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 982622: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=982622 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Package: r-cran-matrixstats Version: 0.58.0-1 Severity: serious https://ci.debian.net/data/autopkgtest/testing/amd64/r/r-bioc-matrixgenerics/10405220/log.gz ... > test_check("MatrixGenerics") ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure (test-api_compatibility.R:89:2): colAvgsPerRowSet works ──────────── `matrixStats_formals` not identical to `MatrixGenerics_default_method_formals`. Names: 1 string mismatch Length mismatch: comparison on first 7 components Component 7: 'is.NA' value mismatch: 0 in current 1 in target ── Error (test-api_compatibility.R:360:2): colMads works ────────────────────── Error: Argument 'center' should be of the same length as number of columns of 'x': 6 != 8 Backtrace: █ 1. ├─MatrixGenerics::colMads(...) test-api_compatibility.R:360:8 2. └─MatrixGenerics::colMads(...) 3. └─MatrixGenerics:::.local(...) 4. └─matrixStats::colMads(...) ── Error (test-api_compatibility.R:593:2): colSds works ─────────────────────── Error: Argument 'center' should be of the same length as number of columns of 'x': 6 != 8 Backtrace: █ 1. ├─MatrixGenerics::colSds(...) test-api_compatibility.R:593:8 2. └─MatrixGenerics::colSds(...) 3. └─MatrixGenerics:::.local(x, rows, cols, na.rm, center, ...) 4. └─matrixStats::colSds(...) 5. └─matrixStats::colVars(...) ── Error (test-api_compatibility.R:678:2): colVars works ────────────────────── Error: Argument 'center' should be of the same length as number of columns of 'x': 6 != 8 Backtrace: █ 1. ├─MatrixGenerics::colVars(...) test-api_compatibility.R:678:8 2. └─MatrixGenerics::colVars(...) 3. └─MatrixGenerics:::.local(x, rows, cols, na.rm, center, ...) 4. └─matrixStats::colVars(...) ── Error (test-api_compatibility.R:698:2): colWeightedMads works ────────────── Error: Argument 'center' should be of the same length as number of columns of 'x': 1 != 6 Backtrace: █ 1. ├─MatrixGenerics::colWeightedMads(...) test-api_compatibility.R:698:8 2. └─MatrixGenerics::colWeightedMads(...) 3. └─matrixStats::colWeightedMads(...) ── Failure (test-api_compatibility.R:856:2): rowAvgsPerColSet works ─────────── `matrixStats_formals` not identical to `MatrixGenerics_default_method_formals`. Names: 1 string mismatch Length mismatch: comparison on first 7 components Component 7: 'is.NA' value mismatch: 0 in current 1 in target ── Error (test-api_compatibility.R:1127:2): rowMads works ───────────────────── Error: Argument 'center' should be of the same length as number of rows of 'x': 16 != 12 Backtrace: █ 1. ├─MatrixGenerics::rowMads(...) test-api_compatibility.R:1127:8 2. └─MatrixGenerics::rowMads(...) 3. └─MatrixGenerics:::.local(...) 4. └─matrixStats::rowMads(...) ── Error (test-api_compatibility.R:1360:2): rowSds works ────────────────────── Error: Argument 'center' should be of the same length as number of rows of 'x': 16 != 12 Backtrace: █ 1. ├─MatrixGenerics::rowSds(...) test-api_compatibility.R:1360:8 2. └─MatrixGenerics::rowSds(...) 3. └─MatrixGenerics:::.local(x, rows, cols, na.rm, center, ...) 4. └─matrixStats::rowSds(...) 5. └─matrixStats::rowVars(...) ── Error (test-api_compatibility.R:1445:2): rowVars works ───────────────────── Error: Argument 'center' should be of the same length as number of rows of 'x': 16 != 12 Backtrace: █ 1. ├─MatrixGenerics::rowVars(...) test-api_compatibility.R:1445:8 2. └─MatrixGenerics::rowVars(...) 3. └─MatrixGenerics:::.local(x, rows, cols, na.rm, center, ...) 4. └─matrixStats::rowVars(...) ── Error (test-api_compatibility.R:1466:2): rowWeightedMads works ───────────── Error: Argument 'center' should be of the same length as number of rows of 'x': 1 != 6 Backtrace: █ 1. ├─MatrixGenerics::rowWeightedMads(...) test-api_compatibility.R:1466:8 2. └─MatrixGenerics::rowWeightedMads(...) 3. └─matrixStats::rowWeightedMads(...) [ FAIL 10 | WARN 0 | SKIP 0 | PASS 300 ] Error: Test failures Execution halted autopkgtest [18:11:11]: test pkg-r-autopkgtest: -----------------------] autopkgtest [18:11:11]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - pkg-r-autopkgtest FAIL non-zero exit status 1 autopkgtest [18:11:11]: @@@@@@@@@@@@@@@@@@@@ summary run-unit-test FAIL non-zero exit status 1 pkg-r-autopkgtest FAIL non-zero exit status 1
--- End Message ---
--- Begin Message ---Source: r-cran-matrixstats Source-Version: 0.58.0-2 Done: Andreas Tille <ti...@debian.org> We believe that the bug you reported is fixed in the latest version of r-cran-matrixstats, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 982...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated r-cran-matrixstats package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Wed, 17 Feb 2021 07:36:50 +0100 Source: r-cran-matrixstats Architecture: source Version: 0.58.0-2 Distribution: unstable Urgency: medium Maintainer: Debian R Packages Maintainers <r-pkg-t...@alioth-lists.debian.net> Changed-By: Andreas Tille <ti...@debian.org> Closes: 982622 Changes: r-cran-matrixstats (0.58.0-2) unstable; urgency=medium . * Breaks: r-bioc-matrixgenerics (<< 1.2.1) Closes: #982622 Checksums-Sha1: 326fcc8f8347a76a18a2d48ac91f0bcc77d1ffc1 2154 r-cran-matrixstats_0.58.0-2.dsc 6fc5d8cea8ee715876058c17a2b1feb2ed046ea4 4280 r-cran-matrixstats_0.58.0-2.debian.tar.xz e6b47a7c429b31d36ad877a4998b368a7b5d9546 10535 r-cran-matrixstats_0.58.0-2_amd64.buildinfo Checksums-Sha256: 9e2acc659db54dac2ca15b5cce1cb1a8eaff162d0d01e061e06b03f01506716f 2154 r-cran-matrixstats_0.58.0-2.dsc 129e87e5d25a9d90e303092e09e08a2ef6eea402f8eb3f5dea931f93c27cbb33 4280 r-cran-matrixstats_0.58.0-2.debian.tar.xz 46981ded03062ee20fb350f929f0dc57109ac4b33efab5142f0afaa5dab7a12a 10535 r-cran-matrixstats_0.58.0-2_amd64.buildinfo Files: 8e1ab3937eeacc7e6d2366920bea181a 2154 gnu-r optional r-cran-matrixstats_0.58.0-2.dsc 6d346f3c2e53f99e074603a23ccad04f 4280 gnu-r optional r-cran-matrixstats_0.58.0-2.debian.tar.xz 43c248d374945e53fde85bf999529bfb 10535 gnu-r optional r-cran-matrixstats_0.58.0-2_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmAsvAoRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEe6BAAi6fllkoiXo5Ppip8FC8jnGMpWHWcGcxv WIThI66LGWtf746l3kLSf5ZXEeQgrai+2u0/teGot2fCftp4D3KR9Y7Utde90kb6 rwzwMgZ5ZND7xf+UrN3Ese+r9Lr6oa88AmdH7/crgi4S7idCqkBQ4KMFeNLzwDmp yU5hy8R22zXpHkDPlyK/mBN6Gi4cQWYSs+3rlD0dIY8dLATFfej15aXhIvWKH8pL +rU2aptKmLlLNnWZXandZkrpq7Gp5iokWA8rNRswMIaVMNE3W199UBt0/lwBgeSd hNdmZfvjyV0n7QhaQMkJ5BCDcxf/TDCb+2oeX13mxYZ7K0cf93uapxclW3S88hAv 4iZWcQZs+LXlYtg7Vc9G/j3/Or4eFJvZE5Fd29VErcGGcrmtVTtkziS+EdztjgmL b2BEZYFcfWUwAxkQnLdJ52QrYhAhfWONKOswhG7HKnBEuOospbcMUt9BCQABzHDE IThbBlkbDxsdmO1vQ4LX+p9dUUA5HgaUH+iO+z2Piswit5zAo9envPSP6CA8vJ46 cSWDAwQtUTW6zy+PMpAZLd6eBMQfSa7K6ULpW/m3tjmIyduiQRQEBNyKA2R2fdCn J+mhWXA5rm8YHK7uHxiskiXN5FcAKawZdSniB3VqfO9RBHhrj5zCCUwHqAWuDKwT Rtt57pJ9Wsk= =J/7H -----END PGP SIGNATURE-----
--- End Message ---
