Your message dated Fri, 11 Dec 2020 18:33:45 +0000 with message-id <e1knnef-00049k...@fasolo.debian.org> and subject line Bug#976906: fixed in libpll 0.3.2-4 has caused the Debian Bug report #976906, regarding libpll: FTBFS on ppc64el: lex_utree.l:22:10: fatal error: parse_utree.h: No such file or directory to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 976906: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=976906 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: libpll Version: 0.3.2-3 Severity: serious Justification: FTBFS on ppc64el Tags: bullseye sid ftbfs Usertags: ftbfs-20201209 ftbfs-bullseye ftbfs-ppc64el Hi, During a rebuild of all packages in sid, your package failed to build on ppc64el. At the same time, it did not fail on amd64. I'm marking this bug as severity:serious since your package currently has ppc64el binary packages in unstable (so this is a regression). Relevant part (hopefully): > /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. > -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 > -O3 -fPIC -g -c -o libpll_la-lex_utree.lo `test -f 'lex_utree.c' || echo > './'`lex_utree.c > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c fasta.c -fPIC -DPIC -o .libs/libpll_la-fasta.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c pll.c -fPIC -DPIC -o .libs/libpll_la-pll.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c likelihood.c -fPIC -DPIC -o .libs/libpll_la-likelihood.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c maps.c -fPIC -DPIC -o .libs/libpll_la-maps.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c output.c -fPIC -DPIC -o .libs/libpll_la-output.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c utree.c -fPIC -DPIC -o .libs/libpll_la-utree.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c utree_moves.c -fPIC -DPIC -o .libs/libpll_la-utree_moves.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c models.c -fPIC -DPIC -o .libs/libpll_la-models.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c parsimony.c -fPIC -DPIC -o .libs/libpll_la-parsimony.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c core_partials.c -fPIC -DPIC -o .libs/libpll_la-core_partials.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c derivatives.c -fPIC -DPIC -o .libs/libpll_la-derivatives.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c utree_svg.c -fPIC -DPIC -o .libs/libpll_la-utree_svg.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c gamma.c -fPIC -DPIC -o .libs/libpll_la-gamma.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c rtree.c -fPIC -DPIC -o .libs/libpll_la-rtree.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c list.c -fPIC -DPIC -o .libs/libpll_la-list.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c partials.c -fPIC -DPIC -o .libs/libpll_la-partials.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c compress.c -fPIC -DPIC -o .libs/libpll_la-compress.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c core_pmatrix.c -fPIC -DPIC -o .libs/libpll_la-core_pmatrix.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c core_likelihood.c -fPIC -DPIC -o .libs/libpll_la-core_likelihood.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c fast_parsimony.c -fPIC -DPIC -o .libs/libpll_la-fast_parsimony.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c core_derivatives.c -fPIC -DPIC -o .libs/libpll_la-core_derivatives.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c phylip.c -fPIC -DPIC -o .libs/libpll_la-phylip.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c hardware.c -fPIC -DPIC -o .libs/libpll_la-hardware.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c random.c -fPIC -DPIC -o .libs/libpll_la-random.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c stepwise.c -fPIC -DPIC -o .libs/libpll_la-stepwise.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c lex_rtree.c -fPIC -DPIC -o .libs/libpll_la-lex_rtree.o > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g > -c lex_utree.c -fPIC -DPIC -o .libs/libpll_la-lex_utree.o > lex_utree.l:22:10: fatal error: parse_utree.h: No such file or directory > 22 | #include "parse_utree.h" > | ^~~~~~~~~~~~~~~ > compilation terminated. > lex_rtree.l:22:10: fatal error: parse_rtree.h: No such file or directory > 22 | #include "parse_rtree.h" > | ^~~~~~~~~~~~~~~ > compilation terminated. > make[3]: *** [Makefile:873: libpll_la-lex_utree.lo] Error 1 The full build log is available from: http://qa-logs.debian.net/2020/12/09/libpll_0.3.2-3_unstable.log A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! If you reassign this bug to another package, please marking it as 'affects'-ing this package. See https://www.debian.org/Bugs/server-control#affects If you fail to reproduce this, please provide a build log and diff it with me so that we can identify if something relevant changed in the meantime. About the archive rebuild: The rebuild was done on a Power8 cluster part of the Grid'5000 testbed. Hardware specs: https://www.grid5000.fr/w/Grenoble:Hardware#drac
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--- Begin Message ---Source: libpll Source-Version: 0.3.2-4 Done: Andreas Tille <ti...@debian.org> We believe that the bug you reported is fixed in the latest version of libpll, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 976...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated libpll package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Fri, 11 Dec 2020 19:05:53 +0100 Source: libpll Architecture: source Version: 0.3.2-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Andreas Tille <ti...@debian.org> Closes: 976906 Changes: libpll (0.3.2-4) unstable; urgency=medium . * Fix parallel build (Thanks a lot to Frédéric Bonnard) Closes: #976906 * Standards-Version: 4.5.1 (routine-update) * Add salsa-ci file (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. Checksums-Sha1: 7096d7de977e22c5aea0ba69922daec222f439ec 2078 libpll_0.3.2-4.dsc 99a374733eb7c7708ca6e7f979b40a86598275db 238044 libpll_0.3.2-4.debian.tar.xz 4283c09ecef55230eae2d835aaf7964ccc50ea63 6697 libpll_0.3.2-4_amd64.buildinfo Checksums-Sha256: 0bfc31f45764a56605da44c39931f2f268974ff9828474447107b4999c3a5230 2078 libpll_0.3.2-4.dsc ffa69576c10ff7ef80645a923211bfd733fe9f37753611e2960957e94322aeb6 238044 libpll_0.3.2-4.debian.tar.xz 34798ae3c327dd67bb378db405b4cae1aa30a7e598ff074003c49d8908a023ba 6697 libpll_0.3.2-4_amd64.buildinfo Files: aa08dc2f4707d3feb5453a2c3efe12c4 2078 science optional libpll_0.3.2-4.dsc b883c903d5e0963ebbb669a726fe5c3b 238044 science optional libpll_0.3.2-4.debian.tar.xz 0047637ec0888bbd3577c99d23d0f5da 6697 science optional libpll_0.3.2-4_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl/Tt3cRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHPMg//U/Lf31zOvdkOs5rTgCMHfLMq5WZWIkee 4GgJ/LAne67jfq9SF0Ljf2lpEGcEtHWP3lYCjciI7uVAfbUjuXVuN+RddqpXL4ls iJig2t6nTz29Ul/6bm/5WrOhofJ/r8mew85fG8hXccTbySZa/ph6oPrnYFnJ0sEN VS2BYq3bmSTRCi84g6O0IMMzK1fwz5K6gtX0BNG4c2gJ7NH3VfWZilhGwJfhGBnW 7ILdVB/1YStl/DIGNBcNLwjcMAPCHdwA4mtuxfQG9KNoY5H3yneAGbyl4+kXrHdy b3t9DZLd8Y/uKB+Md3p5O1G9YULZjbHLlgSogL2kn30kXoS4Yp6ksTaFEzTMhilg goBppcgIz82ThDlg9nTc6hdA5oF7RLdRxjPoIHzTZMSXAtE+XibR67UFNY8cidSp rV7+XJPlg6xa2FZK861LUtHYMX0cUSyh5osoeQDu4Hi6AOwuWJ3UYK90UaG8wSVz qghnsysPAcdQk+cBq0/lRblnly+avTBJdrA4Ba3yk87YXEDVgD9OBnnM6kODs3g/ DrUpwEL56FNc/V469sAkdSKc9glQ0DbHqv78iPQFHdKdLmi+1g9h9zJWEog8HaPm SFR5Y1cRCBKOKeZ6AO3jtc8RsWpRPLOk8fqxJlJ8ta1jB2zIHdlfjx5QpGj2JT53 3HGYmKv6eZ0= =4lWs -----END PGP SIGNATURE-----
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