Your message dated Thu, 01 Oct 2020 12:20:05 +0000 with message-id <e1knxz7-0002dy...@fasolo.debian.org> and subject line Bug#971522: fixed in parsnp 1.5.3+dfsg-2 has caused the Debian Bug report #971522, regarding parsnp: autopkgtest arm64 regression: raxmlHPC-PTHREADS not in system path! to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 971522: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=971522 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: parsnp Version: 1.5.3+dfsg-1 X-Debbugs-CC: debian...@lists.debian.org Severity: serious User: debian...@lists.debian.org Usertags: regression Dear maintainer(s), With a recent upload of parsnp the autopkgtest of parsnp fails in testing on arm64 when that autopkgtest is run with the binary packages of parsnp from unstable. It passes when run with only packages from testing. In tabular form: pass fail parsnp from testing 1.5.3+dfsg-1 all others from testing from testing I copied some of the output at the bottom of this report. Currently this regression is blocking the migration to testing [1]. Can you please investigate the situation and fix it? More information about this bug and the reason for filing it can be found on https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation Paul [1] https://qa.debian.org/excuses.php?package=parsnp https://ci.debian.net/data/autopkgtest/testing/arm64/p/parsnp/7238498/log.gz autopkgtest [21:17:40]: test run-unit-test: [----------------------- [93m[1mTest 1: With GenBank Annotations[0m |--Parsnp 1.5.3--| For detailed documentation please see --> http://harvest.readthedocs.org/en/latest 13:17:40 - [1;31mCRITICAL[0m - raxmlHPC-PTHREADS not in system path! autopkgtest [21:17:40]: test run-unit-test: -----------------------]
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--- Begin Message ---Source: parsnp Source-Version: 1.5.3+dfsg-2 Done: Nilesh Patra <npatra...@gmail.com> We believe that the bug you reported is fixed in the latest version of parsnp, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 971...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Nilesh Patra <npatra...@gmail.com> (supplier of updated parsnp package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Thu, 01 Oct 2020 17:23:41 +0530 Source: parsnp Architecture: source Version: 1.5.3+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Nilesh Patra <npatra...@gmail.com> Closes: 971522 Changes: parsnp (1.5.3+dfsg-2) unstable; urgency=medium . * Team Upload. * Use raxmlHPC instead of raxmlHPC-PTHREADS (Closes: #971522) Checksums-Sha1: 16058a3386df1dbaea62b52338d2730325e4d82b 2075 parsnp_1.5.3+dfsg-2.dsc b66e93b437d713760c4349e2c740be3a9df477cb 7584 parsnp_1.5.3+dfsg-2.debian.tar.xz 1704e73c6b27f7552090a0fa1dc01393fd0c8bb7 6642 parsnp_1.5.3+dfsg-2_amd64.buildinfo Checksums-Sha256: ee6604ba99cac7d4ac878f0f78718dac6e1cc2933c4ea0fa104c5720b21d61a4 2075 parsnp_1.5.3+dfsg-2.dsc 2eb5224053d5f11afb4d25e8cdef1d0d7d0ce01259b48ea2367c1c46f57db577 7584 parsnp_1.5.3+dfsg-2.debian.tar.xz 6e3ba72d6a2cbb3fceb6a31a4b2d44373bf4e379c6b8b1f614a7e0ecf365be04 6642 parsnp_1.5.3+dfsg-2_amd64.buildinfo Files: 980ba05f9aa5529e95a53e55628907f8 2075 science optional parsnp_1.5.3+dfsg-2.dsc 594c1f75f545b1051ad0346ab95ab8f9 7584 science optional parsnp_1.5.3+dfsg-2.debian.tar.xz 348fa1cfcc722bf7dafa836e39963ad0 6642 science optional parsnp_1.5.3+dfsg-2_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEPpmlJvXcwMu/HO6mALrnSzQzafEFAl91xpsUHG5wYXRyYTk3 NEBnbWFpbC5jb20ACgkQALrnSzQzafFL+hAAi0gsY4yfMBTZpCOvCn6KDT8Y3fVx PrEUklgUZQ8NmNXefW0VTZ9tF2Ulr+wFwQebfwO8exUgerwJEXiozjgdolZinCuy JCB/gva1Bl9YoibT53v6LKyf+d8EWQJrE0W33iPn77LWJ6QtmYlrvy4/yZobgtbD jLEJF84uiIeEFT0YlPANSsodIUI1ucg9xVJRVE3m0BM63KHAdchQYu/xJXC4aWwY gZqngyn6oVfQcSYD9vlp+TWNhXMQfVQMcuZbVi55KgHu3MBhdGNntZIDrc4M/lTD Ci7r9t8JqfwyfeDJ/BeNKGMBX7+/M8NqeCttmO7HgSiT5p/Gvk41YurL9cRP82jI PGyVm81m0MkMNMFuky89JWd2wLPoTNlHyXPikiyaEf8LKqNhaGra5Bk3Uxu3UAtN vNZ+TRwUcwWRBJSCRsLn/0VN5n8+gyulzqIhckLCTBwlrab08fVrV2PuYFsSwCx4 dUeOMXn/IwJMqlpHh97SCqKkZSoWHTu90javqdNRDIa0/TxDIwd/np/CU3YnMFHn Wx/x5JwdNRM7E1ag3U5Pf+aaJg6U3278qxjrU154CWMjWSHaAqeOEu98jc4f9moa 5SIfqR+De3rWQXyTd6B9IjbDblDjPBkMzGAIrbWrvM6u89a0uQ+8kOwoNPpnbR9Q EeFJ84zWJI2bZck= =zMwZ -----END PGP SIGNATURE-----
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