Your message dated Wed, 23 Sep 2020 07:49:55 +0000 with message-id <e1kkzxh-000eag...@fasolo.debian.org> and subject line Bug#964656: fixed in rdkit 202003.4-2 has caused the Debian Bug report #964656, regarding rdkit: FTBFS: elog.h:224:34: error: format not a string literal and no format arguments [-Werror=format-security] to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 964656: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=964656 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: rdkit Version: 202003.4-1 Severity: serious Justification: FTBFS on amd64 Tags: bullseye sid ftbfs Usertags: ftbfs-20200709 ftbfs-bullseye Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > g++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong > -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 > -Wno-unused-function -I/usr/local/include -I/<<PKGBUILDDIR>>/Code > -DRDKITVER='"007300"' -I/usr/local/include -I/<<PKGBUILDDIR>>/Code > -DRDKITVER='"007300"' -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit > -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal > -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2 > -I/usr/include/mit-krb5 -fPIC -c -o adapter.o > /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/adapter.cpp > In file included from /usr/include/postgresql/12/server/postgres.h:47, > from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit.h:40, > from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/adapter.cpp:74: > /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/adapter.cpp: In function ‘void* > MolAdjustQueryProperties(CROMol, const char*)’: > /usr/include/postgresql/12/server/utils/elog.h:224:34: error: format not a > string literal and no format arguments [-Werror=format-security] > 224 | elog_finish(elevel, __VA_ARGS__); \ > | ^ > /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/adapter.cpp:649:7: note: in expansion of > macro ‘elog’ > 649 | elog(ERROR, e.message()); > | ^~~~ > cc1plus: some warnings being treated as errors > make[2]: *** [/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/Makefile:112: adapter.o] > Error 1 The full build log is available from: http://qa-logs.debian.net/2020/07/09/rdkit_202003.4-1_unstable.log A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! About the archive rebuild: The rebuild was done on EC2 VM instances from Amazon Web Services, using a clean, minimal and up-to-date chroot. Every failed build was retried once to eliminate random failures.
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--- Begin Message ---Source: rdkit Source-Version: 202003.4-2 Done: Michael Banck <mba...@debian.org> We believe that the bug you reported is fixed in the latest version of rdkit, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 964...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Michael Banck <mba...@debian.org> (supplier of updated rdkit package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Wed, 23 Sep 2020 09:35:31 +0200 Source: rdkit Architecture: source Version: 202003.4-2 Distribution: unstable Urgency: medium Maintainer: Debichem Team <debichem-de...@lists.alioth.debian.org> Changed-By: Michael Banck <mba...@debian.org> Closes: 963637 964656 Changes: rdkit (202003.4-2) unstable; urgency=medium . * debian/patches/postgres_compile_fixes.patch: New patch, fixes compile errors on PostgreSQL-12 (Closes: #964656). * debian/patches/sphinx_compile_fixes.patch: New patch, fixes build failures with Sphinx-3.1 (Closes: #963637). Checksums-Sha1: 93f73ca2223b5c3541e06eff68b2b79aed742e21 2757 rdkit_202003.4-2.dsc 15627962f3c1c052c475edec5d384ba80b977738 99792 rdkit_202003.4-2.debian.tar.xz c9621d7637f1940132314b3624c4afdf58ec58fc 14753 rdkit_202003.4-2_source.buildinfo Checksums-Sha256: dc604629428d831d833b02867ef00a9b3d905a42ac7a4ea4bc8b95b6365e10c6 2757 rdkit_202003.4-2.dsc cd2928ec9b50f4157c17b85d123153303af221aa5d370efff606fb6186f5bb01 99792 rdkit_202003.4-2.debian.tar.xz 917fb8089f6fe04902d6e079195fcffc503e2e6d01a58524fbbd423e93f3d831 14753 rdkit_202003.4-2_source.buildinfo Files: 8f48ea46ec6e561149b63be27084b361 2757 science optional rdkit_202003.4-2.dsc 27e624b4a710ddb1df518c2870241615 99792 science optional rdkit_202003.4-2.debian.tar.xz ddcad029cb411c08f8d8aa44ce322d58 14753 science optional rdkit_202003.4-2_source.buildinfo -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEnKh3dJ+rLk+paGLs3GhqJ7Q0gbAFAl9q+tEACgkQ3GhqJ7Q0 gbDNgg/+InpSvoaM7BLHAUoDtg/jEEr8obQX78XWfrVRJjihBXLIsdZFshQIybdd rjrLEHpipVcOF1OoUKdGpX/d1LTL9kReuMODi2tMpT1Hg0mcWxW0psusP5ogU+L4 PA3V/MIixGDvRksqf3Wg8nnPVa+FFYdsv6xZrib/m0zKwqZV45DLHHK3UQE0lXuk IM7iqof/e44gtLwEWNcH6O6yRO3ZKLTeJEoK/Y7DIg5lINQomPV+Iz+tcZgVynHI uoMFBhXJvWZzD1KYeTkM9lA8xmf7WoGVTQ2zRKcO/6cgTx/kSY4g9JVhEXKsfOvs oVGLz+fikTW6nElnwnwSQituFwHKFXj0bswuHFikoFxEbm0AiYSr3ISJ88IiZmGr d2ahRSqRvY2MArZEsnYF1LSGaHlCNuloArx6ibeiggobY3E1ZjqZEuBB2sHYIgKt PUG4TvinipiswMPJrUHaiM6w5oS0OdEyKjUnKxXr4y9hAoAkB2feX9uVxZ86XpPN wYkFO5Ywn6q9dozqSx6630wkir/hYl5ovmi4tMdl9H2dpIrWSJZuQ8hh/88MA8// ab6JiWD6AlcBTMlnj4AFAxENpm2YnGWz7QdCK/sdCZIGvhwVVx8WWnDF2k91Qwna NEuvkmiFTAdjYfMN/0Q7Ytt2693rI3bE7HeYh6ZVyU03mRQjcjk= =jw2E -----END PGP SIGNATURE-----
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