Your message dated Fri, 07 Aug 2020 15:04:30 +0000
with message-id <e1k43v4-000ifn...@fasolo.debian.org>
and subject line Bug#966999: fixed in python-hdf5storage
0.1.15+git20200608.09dfc5f-1
has caused the Debian Bug report #966999,
regarding python-hdf5storage: FTBFS: File
"/usr/lib/python3/dist-packages/numpydoc/docscrape.py", line 324, in
_parse_see_also ; raise ParseError("%s is not a item name" % line)
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
966999: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=966999
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: python-hdf5storage
Version: 0.1.15-2
Severity: serious
Justification: FTBFS on amd64
Tags: bullseye sid ftbfs
Usertags: ftbfs-20200802 ftbfs-bullseye
Hi,
During a rebuild of all packages in sid, your package failed to build
on amd64.
Relevant part (hopefully):
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> dh_auto_build
> I: pybuild base:217: /usr/bin/python3 setup.py build
> running build
> running build_py
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_hdf5storage/build/hdf5storage
> copying hdf5storage/utilities.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_hdf5storage/build/hdf5storage
> copying hdf5storage/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_hdf5storage/build/hdf5storage
> copying hdf5storage/Marshallers.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_hdf5storage/build/hdf5storage
> copying hdf5storage/lowlevel.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_hdf5storage/build/hdf5storage
> PYTHONPATH=. http_proxy='127.0.0.1:9' \
> python3 -m sphinx -N -b html doc/source build/html
> Running Sphinx v2.4.3
> making output directory... done
> WARNING: html_static_path entry '_static' does not exist
> loading intersphinx inventory from /usr/share/doc/python3/html/objects.inv...
> loading intersphinx inventory from
> /usr/share/doc/python-numpy-doc/html/objects.inv...
> loading intersphinx inventory from
> /usr/share/doc/python-scipy-doc/html/objects.inv...
> loading intersphinx inventory from
> /usr/share/doc/python-h5py-doc/html/objects.inv...
> [autosummary] generating autosummary for: api.rst, compression.rst,
> development.rst, hdf5storage.Marshallers.rst, hdf5storage.lowlevel.rst,
> hdf5storage.rst, hdf5storage.utilities.rst, index.rst, information.rst,
> introduction.rst, storage_format.rst
> building [mo]: targets for 0 po files that are out of date
> building [html]: targets for 11 source files that are out of date
> updating environment: [new config] 11 added, 0 changed, 0 removed
> reading sources... [ 9%] api
> reading sources... [ 18%] compression
> reading sources... [ 27%] development
> reading sources... [ 36%] hdf5storage
> WARNING: [numpydoc] While processing docstring for
> 'hdf5storage.Options.compression_algorithm'
>
> Exception occurred:
> File "/usr/lib/python3/dist-packages/numpydoc/docscrape.py", line 324, in
> _parse_see_also
> raise ParseError("%s is not a item name" % line)
> numpydoc.docscrape.ParseError:
> http://www.hdfgroup.org/doc_resource/SZIP/Commercial_szip.html is not a item
> name in "Algorithm to use for compression.\n\n{'gzip', 'lzf',
> 'szip'}\n\nCompression algorithm to use When the ``compress`` option is
> set\nand a python object is larger than
> ``compress_size_threshold``.\n``'gzip'`` is the only MATLAB compatible
> option.\n\n``'gzip'`` is also known as the Deflate algorithm, which is
> the\ndefault compression algorithm of ZIP files and is a common\ncompression
> algorithm used on tarballs. It is the most\ncompatible option. It has good
> compression and is reasonably\nfast. Its compression level is set with
> the\n``gzip_compression_level`` option, which is an integer between 0\nand 9
> inclusive.\n\n``'lzf'`` is a very fast but low to moderate
> compression\nalgorithm. It is less commonly used than gzip/Deflate,
> but\ndoesn't have any patent or license issues.\n\n``'szip'`` is a
> compression algorithm that has some patents and\nlicense restrictions. It is
> not always available.\n\nSee
> Also\n--------\ncompress\ncompress_size_threshold\nh5py.Group.create_dataset\nhttp://www.hdfgroup.org/doc_resource/SZIP/Commercial_szip.html\n\n";
> The full traceback has been saved in /tmp/sphinx-err-j401k2uv.log, if you
> want to report the issue to the developers.
> Please also report this if it was a user error, so that a better error
> message can be provided next time.
> A bug report can be filed in the tracker at
> <https://github.com/sphinx-doc/sphinx/issues>. Thanks!
> make[1]: *** [debian/rules:13: override_dh_auto_build] Error 2
The full build log is available from:
http://qa-logs.debian.net/2020/08/02/python-hdf5storage_0.1.15-2_unstable.log
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.
--- End Message ---
--- Begin Message ---
Source: python-hdf5storage
Source-Version: 0.1.15+git20200608.09dfc5f-1
Done: Drew Parsons <dpars...@debian.org>
We believe that the bug you reported is fixed in the latest version of
python-hdf5storage, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 966...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Drew Parsons <dpars...@debian.org> (supplier of updated python-hdf5storage
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Fri, 07 Aug 2020 22:39:18 +0800
Source: python-hdf5storage
Architecture: source
Version: 0.1.15+git20200608.09dfc5f-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<debian-science-maintain...@lists.alioth.debian.org>
Changed-By: Drew Parsons <dpars...@debian.org>
Closes: 966999
Changes:
python-hdf5storage (0.1.15+git20200608.09dfc5f-1) unstable; urgency=medium
.
* Team upload.
* New upstream snapshot.
- fixes some documentation issues causing build to fail.
Closes: #966999
- applies debian patch h5py_file_write.patch
* Build-Depends: python3-sphinx-rtd-theme
* debhelper compatibility level 13
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