Your message dated Fri, 24 Jul 2020 09:45:11 +0000
with message-id <e1jyugn-00041p...@fasolo.debian.org>
and subject line Bug#957780: fixed in scipy 1.5.2-1
has caused the Debian Bug report #957780,
regarding scipy: ftbfs with GCC-10
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
957780: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=957780
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:scipy
Version: 1.3.3-3
Severity: normal
Tags: sid bullseye
User: debian-...@lists.debian.org
Usertags: ftbfs-gcc-10
Please keep this issue open in the bug tracker for the package it
was filed for. If a fix in another package is required, please
file a bug for the other package (or clone), and add a block in this
package. Please keep the issue open until the package can be built in
a follow-up test rebuild.
The package fails to build in a test rebuild on at least amd64 with
gcc-10/g++-10, but succeeds to build with gcc-9/g++-9. The
severity of this report will be raised before the bullseye release,
so nothing has to be done for the buster release.
The full build log can be found at:
http://people.debian.org/~doko/logs/gcc10-20200225/scipy_1.3.3-3_unstable_gcc10.log
The last lines of the build log are at the end of this report.
To build with GCC 10, either set CC=gcc-10 CXX=g++-10 explicitly,
or install the gcc, g++, gfortran, ... packages from experimental.
apt-get -t=experimental install g++
Common build failures are new warnings resulting in build failures with
-Werror turned on, or new/dropped symbols in Debian symbols files.
For other C/C++ related build failures see the porting guide at
http://gcc.gnu.org/gcc-10/porting_to.html
[...]
stat.h:8:35:
Warning: Unused variable ‘t4’ declared at (1) [-Wunused-variable]
stat.h:8:39:
Warning: Unused variable ‘t5’ declared at (1) [-Wunused-variable]
gfortran:f77: scipy/sparse/linalg/eigen/arpack/ARPACK/UTIL/zmout.f
gfortran:f77: scipy/sparse/linalg/eigen/arpack/ARPACK/UTIL/second_NONE.f
scipy/sparse/linalg/eigen/arpack/ARPACK/UTIL/second_NONE.f:17:27:
17 | REAL T1
| 1
Warning: Unused variable ‘t1’ declared at (1) [-Wunused-variable]
scipy/sparse/linalg/eigen/arpack/ARPACK/UTIL/second_NONE.f:20:36:
20 | REAL TARRAY( 2 )
| 1
Warning: Unused variable ‘tarray’ declared at (1) [-Wunused-variable]
gfortran:f77: scipy/sparse/linalg/eigen/arpack/ARPACK/UTIL/smout.f
gfortran:f77: scipy/sparse/linalg/eigen/arpack/ARPACK/UTIL/cvout.f
gfortran:f77: scipy/sparse/linalg/eigen/arpack/ARPACK/SRC/ssortr.f
gfortran:f77: scipy/sparse/linalg/eigen/arpack/ARPACK/SRC/sstatn.f
stat.h:8:19:
Warning: Unused variable ‘t0’ declared at (1) [-Wunused-variable]
stat.h:8:23:
Warning: Unused variable ‘t1’ declared at (1) [-Wunused-variable]
stat.h:8:27:
Warning: Unused variable ‘t2’ declared at (1) [-Wunused-variable]
stat.h:8:31:
Warning: Unused variable ‘t3’ declared at (1) [-Wunused-variable]
stat.h:8:35:
Warning: Unused variable ‘t4’ declared at (1) [-Wunused-variable]
stat.h:8:39:
Warning: Unused variable ‘t5’ declared at (1) [-Wunused-variable]
gfortran:f77: scipy/sparse/linalg/eigen/arpack/ARPACK/UTIL/dmout.f
gfortran:f77: scipy/sparse/linalg/eigen/arpack/ARPACK/UTIL/zvout.f
gfortran:f77: scipy/sparse/linalg/eigen/arpack/ARPACK/UTIL/svout.f
gfortran:f77: /<<PKGBUILDDIR>>/scipy/_build_utils/src/wrap_dummy_g77_abi.f
gfortran:f77: scipy/sparse/linalg/eigen/arpack/ARPACK/UTIL/dvout.f
gfortran:f77: scipy/sparse/linalg/eigen/arpack/ARPACK/UTIL/icnteq.f
gfortran:f77: scipy/sparse/linalg/eigen/arpack/ARPACK/UTIL/icopy.f
Running from scipy source directory.
/usr/lib/python3/dist-packages/numpy/distutils/system_info.py:690: UserWarning:
Optimized (vendor) Blas libraries are not found.
Falls back to netlib Blas library which has worse performance.
A better performance should be easily gained by switching
Blas library.
self.calc_info()
/usr/lib/python3/dist-packages/numpy/distutils/system_info.py:782: UserWarning:
Specified path /usr/local/include/python3.8 is invalid.
return self.get_paths(self.section, key)
/usr/lib/python3/dist-packages/numpy/distutils/system_info.py:782: UserWarning:
Specified path /usr/include/suitesparse/python3.8 is invalid.
return self.get_paths(self.section, key)
/usr/lib/python3/dist-packages/numpy/distutils/fcompiler/__init__.py:517:
UserWarning: FFLAGS is used as is, not appended to flags already defined by
numpy.distutils! Use NPY_DISTUTILS_APPEND_FLAGS=1 to obtain appending behavior
instead (this behavior will become default in a future release).
fflags = self.flag_vars.flags + dflags + oflags + aflags
/usr/lib/python3/dist-packages/numpy/distutils/fcompiler/__init__.py:517:
UserWarning: FFLAGS is used as is, not appended to flags already defined by
numpy.distutils! Use NPY_DISTUTILS_APPEND_FLAGS=1 to obtain appending behavior
instead (this behavior will become default in a future release).
fflags = self.flag_vars.flags + dflags + oflags + aflags
/usr/lib/python3/dist-packages/numpy/distutils/fcompiler/__init__.py:517:
UserWarning: FFLAGS is used as is, not appended to flags already defined by
numpy.distutils! Use NPY_DISTUTILS_APPEND_FLAGS=1 to obtain appending behavior
instead (this behavior will become default in a future release).
fflags = self.flag_vars.flags + dflags + oflags + aflags
error: Command "/usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore
-fPIC -O3 -funroll-loops -Iscipy/sparse/linalg/eigen/arpack/ARPACK/SRC
-I/usr/lib/python3/dist-packages/numpy/core/include -c -c
scipy/sparse/linalg/eigen/arpack/ARPACK/SRC/dsaitr.f -o
build/temp.linux-amd64-3.8/scipy/sparse/linalg/eigen/arpack/ARPACK/SRC/dsaitr.o"
failed with exit status 1
E: pybuild pybuild:341: configure: plugin distutils failed with: exit code=1:
python3.8 setup.py config config_fc --noarch build
make[1]: *** [debian/rules:38: build-python3.8] Error 13
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:22: build] Error 2
dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2
--- End Message ---
--- Begin Message ---
Source: scipy
Source-Version: 1.5.2-1
Done: Drew Parsons <dpars...@debian.org>
We believe that the bug you reported is fixed in the latest version of
scipy, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 957...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Drew Parsons <dpars...@debian.org> (supplier of updated scipy package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Fri, 24 Jul 2020 15:17:18 +0800
Source: scipy
Architecture: source
Version: 1.5.2-1
Distribution: experimental
Urgency: medium
Maintainer: Debian Python Modules Team
<python-modules-t...@lists.alioth.debian.org>
Changed-By: Drew Parsons <dpars...@debian.org>
Closes: 957780
Changes:
scipy (1.5.2-1) experimental; urgency=medium
.
* Team upload.
* New upstream release.
- update versioned Build-Depends: cython3 (>= 0.29.18),
python3-numpy (>= 1:1.14.5), python3-pybind11 (>= 2.4.3)
- builds with gfortran 10. Closes: #957780.
* debhelper compatibility level 13
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d48eba049c5032425bf3d0c9e97977d7cb9614e3 17640400 scipy_1.5.2.orig.tar.xz
026add4d278f1ac22703192121e5ae6ad1412551 20868 scipy_1.5.2-1.debian.tar.xz
Checksums-Sha256:
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1869ac9b1119296e9dcb525b82ac27e499a8bf47eb8541fccc46865f0c9ce1a9 20868
scipy_1.5.2-1.debian.tar.xz
Files:
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5bc188f21054a2ecff74fae40dd298da 17640400 python optional
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scipy_1.5.2-1.debian.tar.xz
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--- End Message ---