Your message dated Thu, 23 Jul 2020 10:04:08 +0000
with message-id <e1jyy5a-0004e6...@fasolo.debian.org>
and subject line Bug#957428: fixed in libbpp-seq 2.4.1-5
has caused the Debian Bug report #957428,
regarding libbpp-seq: ftbfs with GCC-10
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
957428: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=957428
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:libbpp-seq
Version: 2.4.1-4
Severity: normal
Tags: sid bullseye
User: debian-...@lists.debian.org
Usertags: ftbfs-gcc-10

Please keep this issue open in the bug tracker for the package it
was filed for.  If a fix in another package is required, please
file a bug for the other package (or clone), and add a block in this
package. Please keep the issue open until the package can be built in
a follow-up test rebuild.

The package fails to build in a test rebuild on at least amd64 with
gcc-10/g++-10, but succeeds to build with gcc-9/g++-9. The
severity of this report will be raised before the bullseye release,
so nothing has to be done for the buster release.

The full build log can be found at:
http://people.debian.org/~doko/logs/gcc10-20200225/libbpp-seq_2.4.1-4_unstable_gcc10.log
The last lines of the build log are at the end of this report.

To build with GCC 10, either set CC=gcc-10 CXX=g++-10 explicitly,
or install the gcc, g++, gfortran, ... packages from experimental.

  apt-get -t=experimental install g++ 

Common build failures are new warnings resulting in build failures with
-Werror turned on, or new/dropped symbols in Debian symbols files.
For other C/C++ related build failures see the porting guide at
http://gcc.gnu.org/gcc-10/porting_to.html

[...]
  
_ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE24_M_get_insert_unique_posERS1_@Base
 2.4.1
  
_ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_@Base
 2.4.1
- 
_ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE7_M_copyINS8_11_Alloc_nodeEEEPSt13_Rb_tree_nodeIS2_EPKSC_PSt18_Rb_tree_node_baseRT_@Base
 2.4.1
- 
_ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE7_M_copyINS8_20_Reuse_or_alloc_nodeEEEPSt13_Rb_tree_nodeIS2_EPKSC_PSt18_Rb_tree_node_baseRT_@Base
 2.4.1
- 
_ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE8_M_eraseEPSt13_Rb_tree_nodeIS2_E@Base
 2.4.1
- 
_ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EEaSERKS8_@Base 
2.4.1
- 
_ZNSt8_Rb_treeImSt4pairIKmPN3bpp13SiteContainerEESt10_Select1stIS5_ESt4lessImESaIS5_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJRS1_EESG_IJEEEEESt17_Rb_tree_iteratorIS5_ESt23_Rb_tree_const_iteratorIS5_EDpOT_@Base
 2.4.1
+#MISSING: 2.4.1-4# 
_ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE7_M_copyINS8_11_Alloc_nodeEEEPSt13_Rb_tree_nodeIS2_EPKSC_PSt18_Rb_tree_node_baseRT_@Base
 2.4.1
+#MISSING: 2.4.1-4# 
_ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE7_M_copyINS8_20_Reuse_or_alloc_nodeEEEPSt13_Rb_tree_nodeIS2_EPKSC_PSt18_Rb_tree_node_baseRT_@Base
 2.4.1
+#MISSING: 2.4.1-4# 
_ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE8_M_eraseEPSt13_Rb_tree_nodeIS2_E@Base
 2.4.1
+ 
_ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EEC1ERKS8_@Base 
2.4.1-4
+ 
_ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EEC2ERKS8_@Base 
2.4.1-4
+#MISSING: 2.4.1-4# 
_ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EEaSERKS8_@Base 
2.4.1
+#MISSING: 2.4.1-4# 
_ZNSt8_Rb_treeImSt4pairIKmPN3bpp13SiteContainerEESt10_Select1stIS5_ESt4lessImESaIS5_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJRS1_EESG_IJEEEEESt17_Rb_tree_iteratorIS5_ESt23_Rb_tree_const_iteratorIS5_EDpOT_@Base
 2.4.1
  
_ZNSt8_Rb_treeImSt4pairIKmPN3bpp13SiteContainerEESt10_Select1stIS5_ESt4lessImESaIS5_EE24_M_get_insert_unique_posERS1_@Base
 2.4.1
  
_ZNSt8_Rb_treeImSt4pairIKmPN3bpp13SiteContainerEESt10_Select1stIS5_ESt4lessImESaIS5_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS5_ERS1_@Base
 2.4.1
- 
_ZNSt8_Rb_treeImSt4pairIKmPN3bpp13SiteContainerEESt10_Select1stIS5_ESt4lessImESaIS5_EE8_M_eraseEPSt13_Rb_tree_nodeIS5_E@Base
 2.4.1
- 
_ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE14_M_insert_nodeEPSt18_Rb_tree_node_baseSA_PSt13_Rb_tree_nodeIS2_E@Base
 2.4.1
- 
_ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJOmEESD_IJEEEEESt17_Rb_tree_iteratorIS2_ESt23_Rb_tree_const_iteratorIS2_EDpOT_@Base
 2.4.1
+#MISSING: 2.4.1-4# 
_ZNSt8_Rb_treeImSt4pairIKmPN3bpp13SiteContainerEESt10_Select1stIS5_ESt4lessImESaIS5_EE8_M_eraseEPSt13_Rb_tree_nodeIS5_E@Base
 2.4.1
+#MISSING: 2.4.1-4# 
_ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE14_M_insert_nodeEPSt18_Rb_tree_node_baseSA_PSt13_Rb_tree_nodeIS2_E@Base
 2.4.1
+#MISSING: 2.4.1-4# 
_ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJOmEESD_IJEEEEESt17_Rb_tree_iteratorIS2_ESt23_Rb_tree_const_iteratorIS2_EDpOT_@Base
 2.4.1
  
_ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE24_M_get_insert_unique_posERS1_@Base
 2.4.1
  
_ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_@Base
 2.4.1
- 
_ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE8_M_eraseEPSt13_Rb_tree_nodeIS2_E@Base
 2.4.1
- 
_ZSt13__adjust_heapIN9__gnu_cxx17__normal_iteratorIPPN3bpp5RangeImEESt6vectorIS5_SaIS5_EEEElS5_NS0_5__ops15_Iter_comp_iterINS2_10rangeComp_ImEEEEEvT_T0_SH_T1_T2_@Base
 2.4.1
- 
_ZSt16__insertion_sortIN9__gnu_cxx17__normal_iteratorIPPN3bpp5RangeImEESt6vectorIS5_SaIS5_EEEENS0_5__ops15_Iter_comp_iterINS2_10rangeComp_ImEEEEEvT_SG_T0_@Base
 2.4.1
+#MISSING: 2.4.1-4# 
_ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE8_M_eraseEPSt13_Rb_tree_nodeIS2_E@Base
 2.4.1
+#MISSING: 2.4.1-4# 
_ZSt13__adjust_heapIN9__gnu_cxx17__normal_iteratorIPPN3bpp5RangeImEESt6vectorIS5_SaIS5_EEEElS5_NS0_5__ops15_Iter_comp_iterINS2_10rangeComp_ImEEEEEvT_T0_SH_T1_T2_@Base
 2.4.1
+#MISSING: 2.4.1-4# 
_ZSt16__insertion_sortIN9__gnu_cxx17__normal_iteratorIPPN3bpp5RangeImEESt6vectorIS5_SaIS5_EEEENS0_5__ops15_Iter_comp_iterINS2_10rangeComp_ImEEEEEvT_SG_T0_@Base
 2.4.1
  
_ZSt16__introsort_loopIN9__gnu_cxx17__normal_iteratorIPPN3bpp5RangeImEESt6vectorIS5_SaIS5_EEEElNS0_5__ops15_Iter_comp_iterINS2_10rangeComp_ImEEEEEvT_SG_T0_T1_@Base
 2.4.1
- 
_ZSt9__find_ifIN9__gnu_cxx17__normal_iteratorIPNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorIS7_SaIS7_EEEENS0_5__ops16_Iter_equals_valIKS7_EEET_SH_SH_T0_St26random_access_iterator_tag@Base
 2.4.1
+#MISSING: 2.4.1-4# 
_ZSt9__find_ifIN9__gnu_cxx17__normal_iteratorIPNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorIS7_SaIS7_EEEENS0_5__ops16_Iter_equals_valIKS7_EEET_SH_SH_T0_St26random_access_iterator_tag@Base
 2.4.1
  
_ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEOS8_PKS5_@Base
 2.4.1
  
_ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEOS8_S9_@Base
 2.4.1
  
_ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEPKS5_OS8_@Base
 2.4.1
@@ -1972,6 +2033,7 @@
  _ZTIN3bpp21ConstSequenceIteratorE@Base 2.4.1
  _ZTIN3bpp21GranthamAAVolumeIndexE@Base 2.4.1
  _ZTIN3bpp21KleinAANetChargeIndexE@Base 2.4.1
+ _ZTIN3bpp21NestedStringTokenizerE@Base 2.4.1-4
  _ZTIN3bpp21ReverseTransliteratorE@Base 2.4.1
  _ZTIN3bpp21SiteNotFoundExceptionE@Base 2.4.1
  _ZTIN3bpp22AbstractTransliteratorE@Base 2.4.1
@@ -2144,6 +2206,7 @@
  _ZTSN3bpp21ConstSequenceIteratorE@Base 2.4.1
  _ZTSN3bpp21GranthamAAVolumeIndexE@Base 2.4.1
  _ZTSN3bpp21KleinAANetChargeIndexE@Base 2.4.1
+ _ZTSN3bpp21NestedStringTokenizerE@Base 2.4.1-4
  _ZTSN3bpp21ReverseTransliteratorE@Base 2.4.1
  _ZTSN3bpp21SiteNotFoundExceptionE@Base 2.4.1
  _ZTSN3bpp22AbstractTransliteratorE@Base 2.4.1
@@ -2383,6 +2446,7 @@
  _ZTVN3bpp21ConstSequenceIteratorE@Base 2.4.1
  _ZTVN3bpp21GranthamAAVolumeIndexE@Base 2.4.1
  _ZTVN3bpp21KleinAANetChargeIndexE@Base 2.4.1
+ _ZTVN3bpp21NestedStringTokenizerE@Base 2.4.1-4
  _ZTVN3bpp21SiteNotFoundExceptionE@Base 2.4.1
  _ZTVN3bpp22AbstractTransliteratorE@Base 2.4.1
  _ZTVN3bpp22DefaultNucleotideScoreE@Base 2.4.1
@@ -3351,5 +3415,6 @@
  
_ZTv0_n96_NK3bpp34EchinodermMitochondrialGeneticCode21getNumberOfStopCodonsEv@Base
 2.4.1
  
_ZTv0_n96_NK3bpp34VertebrateMitochondrialGeneticCode21getNumberOfStopCodonsEv@Base
 2.4.1
  
_ZTv0_n96_NK3bpp36InvertebrateMitochondrialGeneticCode21getNumberOfStopCodonsEv@Base
 2.4.1
+ _ZZNSt8__detail18__to_chars_10_implImEEvPcjT_E8__digits@Base 2.4.1-4
  _ZeqRKN3bpp4SiteES2_@Base 2.4.1
  _ZltRKN3bpp4SiteES2_@Base 2.4.1
dh_makeshlibs: error: failing due to earlier errors
make: *** [debian/rules:10: binary] Error 25
dpkg-buildpackage: error: fakeroot debian/rules binary subprocess returned exit 
status 2

--- End Message ---
--- Begin Message ---
Source: libbpp-seq
Source-Version: 2.4.1-5
Done: Andreas Tille <ti...@debian.org>

We believe that the bug you reported is fixed in the latest version of
libbpp-seq, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 957...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated libbpp-seq package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Thu, 23 Jul 2020 11:33:45 +0200
Source: libbpp-seq
Architecture: source
Version: 2.4.1-5
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team 
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Andreas Tille <ti...@debian.org>
Closes: 957428
Changes:
 libbpp-seq (2.4.1-5) unstable; urgency=medium
 .
   * Standards-Version: 4.5.0 (routine-update)
   * debhelper-compat 13 (routine-update)
   * Add salsa-ci file (routine-update)
   * Rules-Requires-Root: no (routine-update)
   * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
     Repository-Browse.
   * Refer to specific version of license GPL-2+.
   * Remove obsolete fields Contact, Name from debian/upstream/metadata (already
     present in machine-readable debian/copyright).
   * Update symbols for gcc-10
     Closes: #957428
Checksums-Sha1:
 911af1bf8c4902f6f031d44ca7b27431f944375a 2146 libbpp-seq_2.4.1-5.dsc
 8a4b55a940b678c7b8087e4292a7b8680371334f 27816 libbpp-seq_2.4.1-5.debian.tar.xz
 423d622b63a2c0cb9666aff27b6f7b872041cae5 7311 
libbpp-seq_2.4.1-5_amd64.buildinfo
Checksums-Sha256:
 b34fa22e67ba2822afe40d4b4260128ca701fb81049890e07bfd999eabc03a83 2146 
libbpp-seq_2.4.1-5.dsc
 5451a16a0d199f3f0fca262798af91f3909b1ef88a755a45f67fb60ba3f521e8 27816 
libbpp-seq_2.4.1-5.debian.tar.xz
 27a209c301660454c5c185903572df56be1770f075abb2ec74f487a37bb2ec4a 7311 
libbpp-seq_2.4.1-5_amd64.buildinfo
Files:
 eb8f487cd9752d601a40c1b96f16c1a6 2146 science optional libbpp-seq_2.4.1-5.dsc
 c41d8032f79607a1443264fdf845f653 27816 science optional 
libbpp-seq_2.4.1-5.debian.tar.xz
 c1a1e71bcb6387d4dbadf10986a11b1c 7311 science optional 
libbpp-seq_2.4.1-5_amd64.buildinfo

-----BEGIN PGP SIGNATURE-----
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=Q6I/
-----END PGP SIGNATURE-----

--- End Message ---

Reply via email to