Le jeu. 28 mai 2020 à 13:00, Andreas Tille <ti...@debian.org> a écrit :
> Hi Olivier and Vincent > > On Thu, May 28, 2020 at 09:47:37AM +0300, Adrian Bunk wrote: > > > > picard-tools build depends on libguava-java-doc, > > which is no longer built by src:guava-libraries. > Hi andreas, looking at issue, where did you find that libguava-java-doc is no longer built ? I looked at https://packages.debian.org/source/sid/guava-libraries and still see -doc package Olivier > > I've tried to simply leave out libguava-java-doc but either this breaks > a test or the package is failing its build time test for some other > reason: > > > * Exception is: > org.gradle.api.tasks.TaskExecutionException: Execution failed for task > ':barclayTest'. > at > org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter.executeActions(ExecuteActionsTaskExecuter.java:100) > at > org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter.execute(ExecuteActionsTaskExecuter.java:70) > at > org.gradle.api.internal.tasks.execution.OutputDirectoryCreatingTaskExecuter.execute(OutputDirectoryCreatingTaskExecuter.java:51) > at > org.gradle.api.internal.tasks.execution.SkipUpToDateTaskExecuter.execute(SkipUpToDateTaskExecuter.java:62) > at > org.gradle.api.internal.tasks.execution.ResolveTaskOutputCachingStateExecuter.execute(ResolveTaskOutputCachingStateExecuter.java:54) > at > org.gradle.api.internal.tasks.execution.ValidatingTaskExecuter.execute(ValidatingTaskExecuter.java:60) > at > org.gradle.api.internal.tasks.execution.SkipEmptySourceFilesTaskExecuter.execute(SkipEmptySourceFilesTaskExecuter.java:97) > at > org.gradle.api.internal.tasks.execution.CleanupStaleOutputsExecuter.execute(CleanupStaleOutputsExecuter.java:87) > at > org.gradle.api.internal.tasks.execution.ResolveTaskArtifactStateTaskExecuter.execute(ResolveTaskArtifactStateTaskExecuter.java:52) > at > org.gradle.api.internal.tasks.execution.SkipTaskWithNoActionsExecuter.execute(SkipTaskWithNoActionsExecuter.java:52) > at > org.gradle.api.internal.tasks.execution.SkipOnlyIfTaskExecuter.execute(SkipOnlyIfTaskExecuter.java:54) > at > org.gradle.api.internal.tasks.execution.ExecuteAtMostOnceTaskExecuter.execute(ExecuteAtMostOnceTaskExecuter.java:43) > at > org.gradle.api.internal.tasks.execution.CatchExceptionTaskExecuter.execute(CatchExceptionTaskExecuter.java:34) > at > org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker$1.run(DefaultTaskGraphExecuter.java:248) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) > at > org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:241) > at > org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:230) > at > org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.processTask(DefaultTaskPlanExecutor.java:123) > at > org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.access$200(DefaultTaskPlanExecutor.java:79) > at > org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:104) > at > org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:98) > at > org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.execute(DefaultTaskExecutionPlan.java:626) > at > org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.executeWithTask(DefaultTaskExecutionPlan.java:581) > at > org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.run(DefaultTaskPlanExecutor.java:98) > at > org.gradle.internal.concurrent.ExecutorPolicy$CatchAndRecordFailures.onExecute(ExecutorPolicy.java:63) > at > org.gradle.internal.concurrent.ManagedExecutorImpl$1.run(ManagedExecutorImpl.java:46) > at > org.gradle.internal.concurrent.ThreadFactoryImpl$ManagedThreadRunnable.run(ThreadFactoryImpl.java:55) > Caused by: org.gradle.api.GradleException: There were failing tests. See > the report at: > file:///build/picard-tools-2.18.25+dfsg/build/reports/tests/barclayTest/index.html > at > org.gradle.api.tasks.testing.AbstractTestTask.handleTestFailures(AbstractTestTask.java:547) > at > org.gradle.api.tasks.testing.AbstractTestTask.executeTests(AbstractTestTask.java:464) > at org.gradle.api.tasks.testing.Test.executeTests(Test.java:530) > at > java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native > Method) > at > java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) > at > java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) > at > org.gradle.internal.reflect.JavaMethod.invoke(JavaMethod.java:73) > at > org.gradle.api.internal.project.taskfactory.StandardTaskAction.doExecute(StandardTaskAction.java:46) > at > org.gradle.api.internal.project.taskfactory.StandardTaskAction.execute(StandardTaskAction.java:39) > at > org.gradle.api.internal.project.taskfactory.StandardTaskAction.execute(StandardTaskAction.java:26) > at > org.gradle.api.internal.AbstractTask$TaskActionWrapper.execute(AbstractTask.java:780) > at > org.gradle.api.internal.AbstractTask$TaskActionWrapper.execute(AbstractTask.java:747) > at > org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter$1.run(ExecuteActionsTaskExecuter.java:121) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) > at > org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter.executeAction(ExecuteActionsTaskExecuter.java:110) > at > org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter.executeActions(ExecuteActionsTaskExecuter.java:92) > ... 29 more > > > * Get more help at https://help.gradle.org > > > The actual test that fails is > src/test/java/picard/sam/PipedDataTest.java (for whatever reason). > > We are lagging behind upstream anyway and I wonder whether you might > find some time to update the package to the recent upstream version. I > would do so but from the past I've learned that this package always > creates hassle I can't solve when trying to upgrade. So any help would > be really welcome here - specifically since I'm currently hunting behind > so many other stuff that I'd love to avoid things where I've proven to > be incompetent for. > > Kind regards > > Andreas. > > -- > http://fam-tille.de > -- gpg key id: 4096R/326D8438 (keyring.debian.org) Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438
