Your message dated Sun, 01 Dec 2019 08:36:59 +0000 with message-id <e1ibkix-00051p...@fasolo.debian.org> and subject line Bug#929506: fixed in gbrowse 2.56+dfsg-5 has caused the Debian Bug report #929506, regarding gbrowse FTBFS: tests fail to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 929506: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=929506 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: gbrowse Version: 2.56+dfsg-4 Severity: serious Tags: ftbfs sid gbrowse fails to build from source using sbuild in unstable: | Test Summary Report | ------------------- | t/00.compile.t (Wstat: 4608 Tests: 87 Failed: 18) | Failed tests: 1, 3, 5, 7, 10, 15, 17-18, 25, 28, 30, 32 | 34, 40, 44, 46, 59, 86 | Non-zero exit status: 18 | t/01.yeast.t (Wstat: 512 Tests: 0 Failed: 0) | Non-zero exit status: 2 | Parse errors: Bad plan. You planned 7 tests but ran 0. | t/02.rearchitecture.t (Wstat: 512 Tests: 0 Failed: 0) | Non-zero exit status: 2 | Parse errors: Bad plan. You planned 90 tests but ran 0. | t/03.render.t (Wstat: 512 Tests: 0 Failed: 0) | Non-zero exit status: 2 | Parse errors: No plan found in TAP output | t/04.remoteserver.t (Wstat: 512 Tests: 0 Failed: 0) | Non-zero exit status: 2 | Parse errors: Bad plan. You planned 43 tests but ran 0. | t/05.deferredrendering.t (Wstat: 512 Tests: 0 Failed: 0) | Non-zero exit status: 2 | Parse errors: No plan found in TAP output | t/06.featuresearch.t (Wstat: 512 Tests: 0 Failed: 0) | Non-zero exit status: 2 | Parse errors: Bad plan. You planned 26 tests but ran 0. | t/07.karyotype.t (Wstat: 512 Tests: 0 Failed: 0) | Non-zero exit status: 2 | Parse errors: Bad plan. You planned 3 tests but ran 0. | Files=10, Tests=93, 2 wallclock secs ( 0.03 usr 0.00 sys + 1.88 cusr 0.27 csys = 2.18 CPU) | Result: FAIL | Failed 8/10 test programs. 18/93 subtests failed. | dh_auto_test: perl Build test --verbose 1 "TEST_FILES=t/02.rearchitecture.t t/05.deferredrendering.t t/00.compile.t t/01.yeast.t t/07.balancer.t t/08.calign.t" returned exit code 255 | make[1]: *** [debian/rules:23: override_dh_auto_test] Error 2 | make[1]: Leaving directory '/<<PKGBUILDDIR>>' | make: *** [debian/rules:12: build] Error 2 | dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2 This is also observed by reproducible builds using pbuilder: https://tests.reproducible-builds.org/debian/rbuild/unstable/amd64/gbrowse_2.56+dfsg-4.rbuild.log.gz According to reproducible builds, it does not fail in buster or earlier. Helmut
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--- Begin Message ---Source: gbrowse Source-Version: 2.56+dfsg-5 We believe that the bug you reported is fixed in the latest version of gbrowse, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 929...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated gbrowse package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Sun, 01 Dec 2019 08:57:29 +0100 Source: gbrowse Binary: gbrowse gbrowse-data gbrowse-calign Architecture: source Version: 2.56+dfsg-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Andreas Tille <ti...@debian.org> Description: gbrowse - GMOD Generic Genome Browser gbrowse-calign - CAlign helper gbrowse-data - Sample data to use GBrowse Closes: 929506 Changes: gbrowse (2.56+dfsg-5) unstable; urgency=medium . * debhelper-compat 12 * Standards-Version: 4.4.1 * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target * Remove trailing whitespace in debian/changelog * Remove trailing whitespace in debian/copyright * Remove trailing whitespace in debian/rules * Set fields Upstream-Name in debian/copyright. * (Build-)Depends: libbio-db-seqfeature-perl Closes: #929506 Checksums-Sha1: ec8b9fb9671e62ea21ad611229bb5ec184574e52 2665 gbrowse_2.56+dfsg-5.dsc 98a599dc2ac301f91906ecf37e38428670610be8 23640 gbrowse_2.56+dfsg-5.debian.tar.xz Checksums-Sha256: 1a09e71e071f86ce715aef4a076303c9f9e4498dd05e622777fc9970622c8a9f 2665 gbrowse_2.56+dfsg-5.dsc 2381b086dd9775906f0712281f0ae224bf27c460fc1d9839d290497bbc8cff69 23640 gbrowse_2.56+dfsg-5.debian.tar.xz Files: 78537dd317eba583a108aa8111482e20 2665 science optional gbrowse_2.56+dfsg-5.dsc 732e881f04c8ba6f24535e7e8526f7a5 23640 science optional gbrowse_2.56+dfsg-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl3jdF4RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHtHg/9GNLbuygaXtN7xvwbHRNMSwQXV41s/V8s whWL4pW8zZjOkybq3EaVcN+qwFmI1znVQaD/pkuwsxye3fZ3vQCtkbWFL/hKzJph nUGlmfYPzLMGAxiz38/NZOO1vWVS/yhcr3XfQe97VcmkAK6oGnYogNHIPHMkBlcy zkyxIyJa8gY1/swQJimhXOfysGsOalTKhHhyPcMAF3enJ1n78DTKYVNXBInrsgwx Gp5myX20G87ppIHm3mn8JLq3vNzrCCz4j7h/Lxct8duF4Mb6RlqtHe0gCSFA7vKD ItAGHEAQqbIQfFTaKVvrbftUCjbbdPJyxeig0q9+A0QOhrCS9ZBynF/LfAAe4JKc 6f7YFSmA1fmhYCB29eewHiqFvWMVaNC+gWvLT9P6sAcqMVzpjU0zzAXIwCWqeL23 U8jF2z/EkVqWdKp3EQtRABPu60n176WnklYLGwqB6Au1o5Ug2j0J6UHtNHNqhZRb Bad/J2/UJpn+NdjU7Zf7ihg+dQarKHaABmU/Tb1jiuUGECDf0BgBNQpLY5SDafBI wuOfhRAldGSH91LRJk8BF/FqiN0EBUhqViBi/vxUvjDnmdM+f7jBYMRKky3dP/vf cai3cq4gOuUWUTlyovLlokYdrA/xtDN6dSw4PojAPzNja1ljy8ctJ873OtcVCikP A8rZFOI/5nk= =Ykxx -----END PGP SIGNATURE-----
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