Your message dated Sun, 01 Sep 2019 18:38:45 +0000
with message-id <e1i4ukp-000hyg...@fasolo.debian.org>
and subject line Bug#936049: fixed in odb-api 0.18.1-7
has caused the Debian Bug report #936049,
regarding metview: missing libopenmpi-dev dependency?
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
936049: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=936049
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: odb-api
Version: 0.18.1-6
Severity: serious
tags: patch
Hello, looks like for some reasons eckit in Ubuntu fails to see the include
directory for openmpi, because it simply doesn't exist
adding libopenmpi-dev dependency to odb-api should fix the issue, bringing the
directory back when cmake tries to find header files
/usr/lib/x86_64-linux-gnu/pkgconfig/odb.pc:ODB_CC=/usr/bin/cc -pthread
-I/usr/lib/x86_64-linux-gnu/openmpi/include
-I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -Wdate-time
-D_FORTIFY_SOURCE=2 -pipe -fopenmp -fPIC -I${prefix}/include
/usr/lib/x86_64-linux-gnu/cmake/odb/odb-import.cmake:set(ODB_ENVIRONMENT
"ODB_ROOT=/usr;ODB_SYSPATH=/usr/include;ODB_BINPATH=/usr/bin;ODB_BEBINPATH=/usr/bin;ODB_FEBINPATH=/usr/bin;ODB_LIBPATH=/usr/lib;ODB_RTABLE_PATH=/usr/share/odb;ODB_SYSDBPATH=/usr/share/odb;ODB_CC=/usr/bin/cc
-pthread -I/usr/lib/x86_64-linux-gnu/openmpi/include
-I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -Wdate-time
-D_FORTIFY_SOURCE=2 -pipe -fopenmp -fPIC
-I/usr/include;ODB_F90=/usr/bin/gfortran -g -O2
-fdebug-prefix-map=/build/odb-api=. -fstack-protector-strong -fopenmp -fPIC
-ffree-line-length-none -I/usr/include -I/usr/module
-I/usr/odb/module;ODB_COMPILER=/usr/bin/odb98.x -V
-O3;ODB_COMPILER_FLAGS=/usr/share/odb/odb98.flags;ODB_STATIC_LINKING=1;ODB_LD_SHARED=none;ODB_LD_SHARED_SFX=.so;ODB_IOASSIGN_MAXPROC=32;ODB_IOASSIGN_PARAMS=-r
1m -w
1m;ODB_AR=/usr/bin/ar;ODB_GZIP=/bin/gzip;ODB_GUNZIP=/bin/gunzip;ODB_SETUP_SHELL=/bin/sh")
it looks like used and needed
snip of the failing log:
-- The following OPTIONAL packages have not been found:
* Git
* fckit (required version >= 0.6.2)
* transi (required version >= 0.4.4)
* CGAL
* gridtools_storage
-- ENABLE_EXPOSE_SUBPACKAGES is On:
-- All packages in the bundle will be installed at the same level into:
-- /usr
-- Configuring done
CMake Error in atlas/src/atlas/CMakeLists.txt:
Imported target "eckit_mpi" includes non-existent path
"/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi"
in its INTERFACE_INCLUDE_DIRECTORIES. Possible reasons include:
* The path was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and references files it does not
provide.
CMake Error in atlas/src/atlas/CMakeLists.txt:
Imported target "eckit_mpi" includes non-existent path
"/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi"
in its INTERFACE_INCLUDE_DIRECTORIES. Possible reasons include:
* The path was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and references files it does not
provide.
trivial patch here:
https://launchpad.net/ubuntu/+source/odb-api/0.18.1-6ubuntu1
Gianfranco
--- End Message ---
--- Begin Message ---
Source: odb-api
Source-Version: 0.18.1-7
We believe that the bug you reported is fixed in the latest version of
odb-api, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 936...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Alastair McKinstry <mckins...@debian.org> (supplier of updated odb-api package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Sun, 01 Sep 2019 17:48:13 +0100
Source: odb-api
Architecture: source
Version: 0.18.1-7
Distribution: unstable
Urgency: medium
Maintainer: Alastair McKinstry <mckins...@debian.org>
Changed-By: Alastair McKinstry <mckins...@debian.org>
Closes: 936049
Changes:
odb-api (0.18.1-7) unstable; urgency=medium
.
* Add libopenmpi-dev runtime dependency, to help cmake find libeckit_mpi
include
directories. Closes: #936049
Checksums-Sha1:
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Files:
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